Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G15542 Trifolium pratense HOM05D004188 ORTHO05D004445 7.2e-49 197.6 157 100.0
Ca_05256_v3 Cicer arietinum L. HOM05D004188 ORTHO05D004445 4.4e-30 135.2 156 76.3
Psat7g224760 Pisum sativum HOM05D004188 ORTHO05D004445 1.9e-25 119.8 158 75.9
Medtr4g059520 Medicago truncatula HOM05D004188 ORTHO05D004445 5.5e-25 118.2 168 72.0
Medtr4g459420 Medicago truncatula HOM05D004188 ORTHO05D004445 5.5e-25 118.2 168 72.0
VMungo1127G1131 Vigna mungo HOM05D000847 ORTHO05D003278 4.5e-19 98.6 169 48.5
Glyma.12G067800 Glycine max HOM05D004188 ORTHO05D004445 1.1e-17 94.0 93 73.1
Phvul.011G078900 Phaseolus vulgaris HOM05D004188 ORTHO05D004445 1.9e-17 93.2 158 53.8
Lj3g0014225 Lotus japonicus HOM05D004188 ORTHO05D004445 3.3e-17 92.4 72 70.8
Glyma.11G146900 Glycine max HOM05D004188 ORTHO05D004445 2.8e-16 89.4 74 70.3
arahy.Tifrunner.gnm1.ann1.86U5T6 Arachis hypogaea HOM05D004188 ORTHO05D004445 1.4e-15 87.0 71 69.0
arahy.Tifrunner.gnm1.ann1.D47N05 Arachis hypogaea HOM05D004188 ORTHO05D004445 1.4e-15 87.0 73 67.1
Sopen06g005740 Solanum pennellii HOM05D004188 ORTHO05D004445 1.3e-13 80.5 59 71.2
CAN.G920.1 Capsicum annuum HOM05D004188 ORTHO05D004445 3.7e-13 79.0 101 59.4
PGSC0003DMG400029164 Solanum tuberosum HOM05D004188 ORTHO05D004445 3.7e-13 79.0 66 66.7
Lalb_Chr14g0374691 Lupinus albus HOM05D004188 ORTHO05D004445 1.4e-12 77.0 68 61.8
Lalb_Chr03g0027321 Lupinus albus HOM05D004188 ORTHO05D004445 7.0e-12 74.7 71 59.2
Solyc06g016790.3 Solanum lycopersicum HOM05D004188 ORTHO05D004445 7.0e-12 74.7 159 40.3
CiPaw.14G080400 Carya illinoinensis HOM05D004188 ORTHO05D004445 9.2e-12 74.3 71 54.9
Cc01_g11150 Coffea canephora HOM05D004188 ORTHO05D004445 1.2e-11 73.9 73 58.9
RcHm_v2.0_Chr5g0059401 Rosa chinensis HOM05D004188 ORTHO05D004445 1.2e-11 73.9 69 60.9
Nitab4.5_0000650g0240 Nicotiana tabacum HOM05D004188 ORTHO05D004445 1.6e-11 73.6 62 58.1
FAN11G3469 Fragaria x ananassa HOM05D004188 ORTHO05D004445 5.9e-11 71.6 68 58.8
Manes.04G021600 Manihot esculenta HOM05D004188 ORTHO05D004445 5.9e-11 71.6 92 48.9
Nitab4.5_0011114g0020 Nicotiana tabacum HOM05D004188 ORTHO05D004445 5.9e-11 71.6 62 58.1
MBI10_g41700_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 7.8e-11 71.2 60 61.7
TWI75G1406 Tripterygium wilfordii HOM05D004188 ORTHO05D004445 7.8e-11 71.2 57 64.9
MSTRG.21125 Avicennia marina HOM05D004188 ORTHO05D004445 1.0e-10 70.9 59 64.4
Ca_01416_v3 Cicer arietinum L. HOM05D004188 ORTHO05D004445 1.3e-10 70.5 70 51.4
Hma1.2p1_1031F.1_g250070 Hydrangea macrophylla HOM05D004188 ORTHO05D004445 1.7e-10 70.1 60 58.3
Oeu030181.1 Olea europaea HOM05D004188 ORTHO05D004445 3.8e-10 68.9 71 53.5
Peaxi162Scf00092g00152 Petunia axillaris HOM05D004188 ORTHO05D004445 3.8e-10 68.9 93 51.6
MBI07_g19312_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 5.0e-10 68.6 74 52.7
Prupe.6G101100 Prunus persica HOM05D004188 ORTHO05D004445 5.0e-10 68.6 74 52.7
PGSC0003DMG400008124 Solanum tuberosum HOM05D004188 ORTHO05D004445 5.0e-10 68.6 68 55.9
FvH4_3g32420 Fragaria vesca HOM05D004188 ORTHO05D004445 6.6e-10 68.2 51 66.7
Lsat_1_v5_gn_6_46020 Lactuca sativa HOM05D004188 ORTHO05D004445 6.6e-10 68.2 74 54.1
Oeu001268.1 Olea europaea HOM05D004188 ORTHO05D004445 6.6e-10 68.2 71 52.1
BcaB01g01101 Brassica carinata HOM05D004188 ORTHO05D004445 1.1e-09 67.4 87 57.5
CAN.G631.25 Capsicum annuum HOM05D004188 ORTHO05D004445 1.1e-09 67.4 69 56.5
Rhsim13G0094200 Rhododendron simsii HOM05D004188 ORTHO05D004445 1.1e-09 67.4 57 61.4
CANSAT54G2412 Cannabis sativa HOM05D004188 ORTHO05D004445 1.5e-09 67.0 74 51.4
TPR.G11601 Trifolium pratense HOM05D004188 ORTHO05D004445 1.9e-09 66.6 91 41.8
Duzib168G0960 Durio zibethinus HOM05D004188 ORTHO05D004445 2.5e-09 66.2 165 32.7
FAN25G0660 Fragaria x ananassa HOM05D004188 ORTHO05D004445 3.3e-09 65.9 68 57.4
Lalb_Chr22g0350231 Lupinus albus HOM05D004188 ORTHO05D004445 3.3e-09 65.9 71 52.1
Cfa011320 Carpinus fangiana HOM05D004188 ORTHO05D004445 4.3e-09 65.5 66 59.1
MELO3C026856.2 Cucumis melo HOM05D004188 ORTHO05D004445 4.3e-09 65.5 72 52.8
Glyma.12G172900 Glycine max HOM05D004188 ORTHO05D004445 5.6e-09 65.1 57 57.9
Psat5g278280 Pisum sativum HOM05D004188 ORTHO05D004445 5.6e-09 65.1 70 45.7
TWI31G0432 Tripterygium wilfordii HOM05D004188 ORTHO05D004445 5.6e-09 65.1 57 61.4
FAN16G2082 Fragaria x ananassa HOM05D004188 ORTHO05D004445 7.3e-09 64.7 69 55.1
FAN21G0748 Fragaria x ananassa HOM05D004188 ORTHO05D004445 7.3e-09 64.7 51 64.7
Sed0026517 Sechium edule HOM05D004188 ORTHO05D004445 7.3e-09 64.7 60 60.0
CARHR150740 Cardamine hirsuta HOM05D004188 ORTHO05D004445 9.5e-09 64.3 92 52.2
Sc06g0010170 Simmondsia chinensis HOM05D004188 ORTHO05D004445 9.5e-09 64.3 54 59.3
Gohir.D03G134100 Gossypium hirsutum HOM05D004188 ORTHO05D004445 1.2e-08 63.9 163 35.0
Oeu002868.1 Olea europaea HOM05D004188 ORTHO05D004445 1.2e-08 63.9 71 46.5
arahy.Tifrunner.gnm1.ann1.70MDEI Arachis hypogaea HOM05D004188 ORTHO05D004445 1.6e-08 63.5 74 52.7
arahy.Tifrunner.gnm1.ann1.P4NYDW Arachis hypogaea HOM05D004188 ORTHO05D004445 1.6e-08 63.5 74 52.7
EL10Ac9g22513 Beta vulgaris HOM05D004188 ORTHO05D004445 1.6e-08 63.5 59 54.2
BcaC01g01980 Brassica carinata HOM05D004188 ORTHO05D004445 1.6e-08 63.5 69 56.5
A06p21540 Brassica napus HOM05D004188 ORTHO05D004445 1.6e-08 63.5 69 56.5
C03p69850 Brassica napus HOM05D004188 ORTHO05D004445 1.6e-08 63.5 69 56.5
BolC3t19246H Brassica oleracea HOM05D004188 ORTHO05D004445 1.6e-08 63.5 69 56.5
BraA06t25239Z Brassica rapa HOM05D004188 ORTHO05D004445 1.6e-08 63.5 63 57.1
ClCG03G002160 Citrullus lanatus HOM05D004188 ORTHO05D004445 1.6e-08 63.5 72 51.4
MELO3C025771.2 Cucumis melo HOM05D004188 ORTHO05D004445 1.6e-08 63.5 69 53.6
Migut.D02222 Erythranthe guttata HOM05D004188 ORTHO05D004445 1.6e-08 63.5 62 59.7
Migut.D02278 Erythranthe guttata HOM05D004188 ORTHO05D004445 1.6e-08 63.5 62 59.7
Gorai.003G141200 Gossypium raimondii HOM05D004188 ORTHO05D004445 1.6e-08 63.5 163 35.0
ClCG02G021140 Citrullus lanatus HOM05D004188 ORTHO05D004445 2.1e-08 63.2 60 58.3
CsaV3_1G012810 Cucumis sativus L. HOM05D004188 ORTHO05D004445 2.1e-08 63.2 161 49.1
DCAR_006061 Daucus carota HOM05D004188 ORTHO05D004445 2.1e-08 63.2 70 52.9
ECA233G4889 Erigeron canadensis HOM05D004188 ORTHO05D004445 2.1e-08 63.2 56 58.9
Potri.009G013500 Populus trichocarpa HOM05D004188 ORTHO05D004445 2.1e-08 63.2 50 64.0
Sed0015663 Sechium edule HOM05D004188 ORTHO05D004445 2.1e-08 63.2 62 56.5
AT3G45230 Arabidopsis thaliana HOM05D004188 ORTHO05D004445 2.8e-08 62.8 72 56.9
Actinidia24099 Actinidia chinensis HOM05D004188 ORTHO05D004445 3.6e-08 62.4 56 57.1
Gohir.A03G034200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 3.6e-08 62.4 163 34.4
Gorai.009G106500 Gossypium raimondii HOM05D004188 ORTHO05D004445 3.6e-08 62.4 57 56.1
Peaxi162Scf00270g00089 Petunia axillaris HOM05D004188 ORTHO05D004445 3.6e-08 62.4 63 54.0
CsaV3_6G013900 Cucumis sativus L. HOM05D004188 ORTHO05D004445 4.7e-08 62.0 72 50.0
CiPaw.13G112700 Carya illinoinensis HOM05D004188 ORTHO05D004445 6.1e-08 61.6 92 43.5
Lsat_1_v5_gn_2_98481 Lactuca sativa HOM05D004188 ORTHO05D004445 6.1e-08 61.6 56 57.1
Manes.11G144800 Manihot esculenta HOM05D004188 ORTHO05D004445 6.1e-08 61.6 59 61.0
Potri.004G210300 Populus trichocarpa HOM05D004188 ORTHO05D004445 6.1e-08 61.6 71 52.1
PGR102G1665 Punica granatum HOM05D004188 ORTHO05D004445 6.1e-08 61.6 65 52.3
AL5G23790 Arabidopsis lyrata HOM05D004188 ORTHO05D004445 8.0e-08 61.2 74 54.1
Duzib150G1311 Durio zibethinus HOM05D004188 ORTHO05D004445 8.0e-08 61.2 161 42.9
Rhsim01G0217000 Rhododendron simsii HOM05D004188 ORTHO05D004445 8.0e-08 61.2 51 60.8
Rhsim01G0217100 Rhododendron simsii HOM05D004188 ORTHO05D004445 8.0e-08 61.2 56 57.1
VMungo1080G0149 Vigna mungo HOM05D004188 ORTHO05D004445 8.0e-08 61.2 56 57.1
Sabra04G0141900 Salix brachista HOM05D004188 ORTHO05D004445 1.0e-07 60.8 50 64.0
Carub.0005s1101 Capsella rubella HOM05D004188 ORTHO05D004445 1.8e-07 60.1 61 60.7
Medtr2g094170 Medicago truncatula HOM05D004188 ORTHO05D004445 1.8e-07 60.1 73 45.2
unitig_736.g22415 Utricularia gibba HOM05D004188 ORTHO05D004445 1.8e-07 60.1 65 46.2
Duzib170G0015 Durio zibethinus HOM05D004188 ORTHO05D004445 2.3e-07 59.7 98 39.8
Solyc11g069390.1 Solanum lycopersicum HOM05D004188 ORTHO05D004445 3.0e-07 59.3 45 66.7
Sabra09G0008000 Salix brachista HOM05D004188 ORTHO05D004445 6.8e-07 58.2 50 60.0
TWI79G1650 Tripterygium wilfordii HOM05D004188 ORTHO05D004445 6.8e-07 58.2 40 70.0
CANSAT56G2191 Cannabis sativa HOM05D004188 ORTHO05D004445 8.9e-07 57.8 54 57.4
Lsat_1_v5_gn_1_65340 Lactuca sativa HOM05D004188 ORTHO05D004445 8.9e-07 57.8 56 53.6
Phvul.005G135700 Phaseolus vulgaris HOM05D004188 ORTHO05D004445 8.9e-07 57.8 59 52.5
Ah.01g014350 Amaranthus hybridus HOM05D004188 ORTHO05D004445 1.2e-06 57.4 59 49.2
Dinv31327 Davidia involucrata HOM05D001979 ORTHO05D001961 1.5e-06 57.0 46 58.7
Dinv32748 Davidia involucrata HOM05D004188 ORTHO05D004445 1.5e-06 57.0 70 50.0
Sopen11g028110 Solanum pennellii HOM05D004188 ORTHO05D004445 2.0e-06 56.6 45 64.4
Atru.chr3.3633 Acer truncatum HOM05D004188 ORTHO05D004445 2.6e-06 56.2 42 66.7
BraA10t43861Z Brassica rapa HOM05D004188 ORTHO05D004445 2.6e-06 56.2 66 51.5
HPP92_005145 Vanilla planifolia HOM05D053319 ORTHO05D004445 2.6e-06 56.2 61 47.5
Thhalv10002916m.g Eutrema salsugineum HOM05D004188 ORTHO05D004445 3.4e-06 55.8 46 60.9
A10p17820 Brassica napus HOM05D004188 ORTHO05D004445 4.4e-06 55.5 66 51.5
Gohir.D05G102200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 5.8e-06 55.1 164 32.9
Nitab4.5_0012712g0020 Nicotiana tabacum HOM05D004188 ORTHO05D004445 5.8e-06 55.1 56 53.6
BolC3t13742H Brassica oleracea HOM05D004188 ORTHO05D004445 7.5e-06 54.7 56 58.9
Ciclev10029471m.g Citrus clementina HOM05D004188 ORTHO05D004445 7.5e-06 54.7 156 46.8
THA.LOC104799503 Tarenaya hassleriana HOM05D004188 ORTHO05D004445 9.8e-06 54.3 57 56.1
unitig_699.g19195 Utricularia gibba HOM05D004188 ORTHO05D004445 9.8e-06 54.3 45 57.8


User provided reference genes

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