Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13729 Trifolium pratense HOM05D000727 ORTHO05D000541 1.5e-34 149.1 78 100.0
TPR.G8143 Trifolium pratense HOM05D000727 ORTHO05D000541 1.8e-16 89.0 74 68.9
Lalb_Chr19g0124671 Lupinus albus HOM05D000727 ORTHO05D000541 2.0e-15 85.5 73 64.4
arahy.Tifrunner.gnm1.ann1.J62Q7G Arachis hypogaea HOM05D000727 ORTHO05D000541 2.6e-15 85.1 73 63.0
Haze_20996 Corylus avellana HOM05D000727 ORTHO05D000541 4.4e-15 84.3 70 60.0
Ca_07631_v3 Cicer arietinum L. HOM05D000727 ORTHO05D000541 5.7e-15 84.0 74 64.9
Cfa017213 Carpinus fangiana HOM05D000727 ORTHO05D000541 9.8e-15 83.2 70 60.0
Psat3g129760 Pisum sativum HOM05D000727 ORTHO05D000541 1.7e-14 82.4 73 67.1
arahy.Tifrunner.gnm1.ann1.78GQMD Arachis hypogaea HOM05D000727 ORTHO05D000541 2.9e-14 81.6 76 59.2
Dinv23097 Davidia involucrata HOM05D000727 ORTHO05D000541 6.3e-14 80.5 73 60.3
CiPaw.10G156100 Carya illinoinensis HOM05D000727 ORTHO05D000541 8.3e-14 80.1 71 62.0
MELO3C003298.2 Cucumis melo HOM05D000727 ORTHO05D000541 8.3e-14 80.1 72 61.1
CsaV3_4G026240 Cucumis sativus L. HOM05D000727 ORTHO05D000541 1.1e-13 79.7 72 61.1
PGR004G1812 Punica granatum HOM05D000727 ORTHO05D000541 1.8e-13 79.0 71 57.7
Eucgr.A00506 Eucalyptus grandis HOM05D000727 ORTHO05D000541 2.4e-13 78.6 71 60.6
CSS0039608 Camellia sinensis var. sinensis HOM05D000727 ORTHO05D000541 3.2e-13 78.2 71 59.2
Nn2g13692 Nelumbo nucifera HOM05D000727 ORTHO05D000541 4.1e-13 77.8 71 59.2
MBI14_g31687_MAGBIO Magnolia biondii HOM05D000727 ORTHO05D000541 5.4e-13 77.4 71 59.2
Glyma.03G060200 Glycine max HOM05D000727 ORTHO05D000541 9.2e-13 76.6 71 59.2
Aqoxy4G02598 Aquilegia oxysepala HOM05D000727 ORTHO05D000541 1.2e-12 76.3 72 56.9
CSS0008683 Camellia sinensis var. sinensis HOM05D000727 ORTHO05D000541 1.2e-12 76.3 71 59.2
CSS0045349 Camellia sinensis var. sinensis HOM05D000727 ORTHO05D000541 1.2e-12 76.3 71 59.2
Phvul.010G001800 Phaseolus vulgaris HOM05D000727 ORTHO05D000541 1.2e-12 76.3 71 59.2
Atru.chr8.2229 Acer truncatum HOM05D000727 ORTHO05D000541 2.0e-12 75.5 70 58.6
Actinidia05368 Actinidia chinensis HOM05D000727 ORTHO05D000541 2.7e-12 75.1 71 59.2
Potri.010G189900 Populus trichocarpa HOM05D000727 ORTHO05D000541 2.7e-12 75.1 73 52.1
ATR0618G150 Amborella trichopoda HOM05D000727 ORTHO05D000541 3.5e-12 74.7 66 57.6
Sc22g0002460 Simmondsia chinensis HOM05D000727 ORTHO05D000541 4.6e-12 74.3 71 60.6
Aa31sc318G40 Aethionema arabicum HOM05D000727 ORTHO05D000541 5.9e-12 73.9 70 58.6
CANSAT35G0903 Cannabis sativa HOM05D000727 ORTHO05D000541 5.9e-12 73.9 73 56.2
PSO801G0185 Papaver somniferum HOM05D000727 ORTHO05D000541 7.8e-12 73.6 70 54.3
TWI53G1408 Tripterygium wilfordii HOM05D000727 ORTHO05D000541 7.8e-12 73.6 70 58.6
Duzib093G2247 Durio zibethinus HOM05D000727 ORTHO05D000541 1.3e-11 72.8 70 57.1
Nn2g11467 Nelumbo nucifera HOM05D000727 ORTHO05D000541 1.3e-11 72.8 71 56.3
TWI77G0823 Tripterygium wilfordii HOM05D000727 ORTHO05D000541 1.3e-11 72.8 72 55.6
TAR369G0911 Trochodendron aralioides HOM05D000727 ORTHO05D000541 1.3e-11 72.8 71 56.3
TAR623G0383 Trochodendron aralioides HOM05D000727 ORTHO05D000541 1.3e-11 72.8 73 54.8
Cc06_g01450 Coffea canephora HOM05D000727 ORTHO05D000541 1.7e-11 72.4 75 53.3
Sopen09g007460 Solanum pennellii HOM05D000727 ORTHO05D000541 1.7e-11 72.4 75 57.3
Atru.chr12.22 Acer truncatum HOM05D000727 ORTHO05D000541 2.3e-11 72.0 74 54.1
BraA09t39960Z Brassica rapa HOM05D000727 ORTHO05D000541 2.3e-11 72.0 71 57.7
CDE03G0021 Ceratophyllum demersum HOM05D000727 ORTHO05D000541 2.3e-11 72.0 73 52.1
PGSC0003DMG400008501 Solanum tuberosum HOM05D000727 ORTHO05D000541 2.3e-11 72.0 75 56.0
BcaB01g00470 Brassica carinata HOM05D000727 ORTHO05D000541 2.9e-11 71.6 71 57.7
BcaC06g33358 Brassica carinata HOM05D000727 ORTHO05D000541 2.9e-11 71.6 70 60.0
C07p46650 Brassica napus HOM05D000727 ORTHO05D000541 2.9e-11 71.6 70 60.0
C08p27110 Brassica napus HOM05D000727 ORTHO05D000541 2.9e-11 71.6 71 57.7
BolC7t45180H Brassica oleracea HOM05D000727 ORTHO05D000541 2.9e-11 71.6 70 60.0
BolC8t50324H Brassica oleracea HOM05D000727 ORTHO05D000541 2.9e-11 71.6 71 57.7
Sed0014872 Sechium edule HOM05D000727 ORTHO05D000541 2.9e-11 71.6 71 54.9
GSVIVG01032840001 Vitis vinifera HOM05D000727 ORTHO05D000541 2.9e-11 71.6 73 52.1
CDE04G3528 Ceratophyllum demersum HOM05D000727 ORTHO05D000541 3.9e-11 71.2 73 52.1
A09p45000 Brassica napus HOM05D000727 ORTHO05D000541 5.0e-11 70.9 71 57.7
Solyc09g014620.3 Solanum lycopersicum HOM05D000727 ORTHO05D000541 5.0e-11 70.9 75 56.0
Aqoxy2G00915 Aquilegia oxysepala HOM05D000727 ORTHO05D000541 6.6e-11 70.5 64 57.8
Prupe.6G276300 Prunus persica HOM05D000727 ORTHO05D000541 6.6e-11 70.5 70 54.3
Oeu033594.1 Olea europaea HOM05D000727 ORTHO05D000541 8.6e-11 70.1 73 54.8
PSO339G3526 Papaver somniferum HOM05D000727 ORTHO05D000541 8.6e-11 70.1 71 56.3
Cpa.g.sc11.167 Carica papaya HOM05D000727 ORTHO05D000541 1.1e-10 69.7 71 56.3
Ciclev10032930m.g Citrus clementina HOM05D000727 ORTHO05D000541 1.1e-10 69.7 73 49.3
Lsat_1_v5_gn_8_100320 Lactuca sativa HOM05D000727 ORTHO05D000541 1.1e-10 69.7 72 52.8
Manes.07G128600 Manihot esculenta HOM05D000727 ORTHO05D000541 1.1e-10 69.7 73 52.1
Ciclev10012868m.g Citrus clementina HOM05D000727 ORTHO05D000541 1.5e-10 69.3 71 57.7
FvH4_7g24360 Fragaria vesca HOM05D000727 ORTHO05D000541 1.5e-10 69.3 71 53.5
Medtr7g068280 Medicago truncatula HOM05D000727 ORTHO05D000541 1.5e-10 69.3 73 56.2
Oeu063406.1 Olea europaea HOM05D000727 ORTHO05D000541 1.9e-10 68.9 72 55.6
Sabra08G0049500 Salix brachista HOM05D000727 ORTHO05D000541 1.9e-10 68.9 71 50.7
GSVIVG01033966001 Vitis vinifera HOM05D000727 ORTHO05D000541 1.9e-10 68.9 71 53.5
A03p48550 Brassica napus HOM05D000727 ORTHO05D000541 2.5e-10 68.6 70 58.6
Glyma.01G116000 Glycine max HOM05D000727 ORTHO05D000541 2.5e-10 68.6 71 56.3
TAR636G2383 Trochodendron aralioides HOM05D000727 ORTHO05D000541 2.5e-10 68.6 75 54.7
BraA03t13960Z Brassica rapa HOM05D000727 ORTHO05D000541 3.3e-10 68.2 70 58.6
ECA247G2462 Erigeron canadensis HOM05D000727 ORTHO05D000541 3.3e-10 68.2 72 56.9
FAN01G2349 Fragaria x ananassa HOM05D000727 ORTHO05D000541 3.3e-10 68.2 71 52.1
TAR633G2673 Trochodendron aralioides HOM05D000727 ORTHO05D000541 3.3e-10 68.2 71 56.3
Lsat_1_v5_gn_9_34101 Lactuca sativa HOM05D000727 ORTHO05D000541 4.3e-10 67.8 72 54.2
Lj3C954T14 Lonicera japonica HOM05D000727 ORTHO05D000541 5.6e-10 67.4 71 56.3
Thecc.05G017100 Theobroma cacao HOM05D000727 ORTHO05D000541 5.6e-10 67.4 70 52.9
BcaC06g33012 Brassica carinata HOM05D000727 ORTHO05D000541 7.3e-10 67.0 71 57.7
Dinv17983 Davidia involucrata HOM05D000727 ORTHO05D000541 7.3e-10 67.0 72 52.8
Potri.008G067400 Populus trichocarpa HOM05D000727 ORTHO05D000541 9.5e-10 66.6 71 49.3
COL.COLO4_14544 Corchorus olitorius HOM05D000727 ORTHO05D000541 2.1e-09 65.5 71 54.9
unitig_749.g14170 Utricularia gibba HOM05D000727 ORTHO05D000541 2.1e-09 65.5 74 52.7
CiPaw.01G297700 Carya illinoinensis HOM05D000727 ORTHO05D000541 2.8e-09 65.1 73 52.1
SGA_v2.0_scaffold75G25017 Striga asiatica HOM05D000727 ORTHO05D000541 2.8e-09 65.1 64 54.7
Gohir.A01G227700 Gossypium hirsutum HOM05D000727 ORTHO05D000541 3.6e-09 64.7 70 52.9
Gohir.D01G217500 Gossypium hirsutum HOM05D000727 ORTHO05D000541 3.6e-09 64.7 70 52.9
Gorai.002G263800 Gossypium raimondii HOM05D000727 ORTHO05D000541 3.6e-09 64.7 70 52.9
MD01G1132900 Malus domestica HOM05D000727 ORTHO05D000541 3.6e-09 64.7 72 51.4
Prupe.2G249000 Prunus persica HOM05D000727 ORTHO05D000541 1.8e-08 62.4 74 51.4
SGA_v2.0_scaffold85G26745 Striga asiatica HOM05D000727 ORTHO05D000541 1.8e-08 62.4 66 54.5
Haze_17217 Corylus avellana HOM05D000727 ORTHO05D000541 2.3e-08 62.0 73 47.9
Lj1g0014439 Lotus japonicus HOM05D000727 ORTHO05D000541 2.3e-08 62.0 73 53.4
Cfa001327 Carpinus fangiana HOM05D000727 ORTHO05D000541 3.1e-08 61.6 73 47.9
Thecc.10G020300 Theobroma cacao HOM05D000727 ORTHO05D000541 3.1e-08 61.6 64 48.4
Duzib114G0948 Durio zibethinus HOM05D000727 ORTHO05D000541 5.2e-08 60.8 64 46.9
FvH4_6g11530 Fragaria vesca HOM05D000727 ORTHO05D000541 5.2e-08 60.8 64 51.6
FAN02G0049 Fragaria x ananassa HOM05D000727 ORTHO05D000541 5.2e-08 60.8 64 51.6
FAN05G0296 Fragaria x ananassa HOM05D000727 ORTHO05D000541 5.2e-08 60.8 64 51.6
FAN09G4298 Fragaria x ananassa HOM05D000727 ORTHO05D000541 5.2e-08 60.8 58 55.2
FAN14G4982 Fragaria x ananassa HOM05D000727 ORTHO05D000541 5.2e-08 60.8 64 51.6
Gohir.D09G160300 Gossypium hirsutum HOM05D000727 ORTHO05D000541 5.2e-08 60.8 66 51.5
Gorai.006G181900 Gossypium raimondii HOM05D000727 ORTHO05D000541 5.2e-08 60.8 66 51.5
Actinidia11595 Actinidia chinensis HOM05D000727 ORTHO05D000541 6.8e-08 60.5 64 51.6
RcHm_v2.0_Chr3g0463231 Rosa chinensis HOM05D000727 ORTHO05D000541 6.8e-08 60.5 65 53.8
Actinidia29106 Actinidia chinensis HOM05D000727 ORTHO05D000541 8.9e-08 60.1 72 48.6
BcaC06g33014 Brassica carinata HOM05D000727 ORTHO05D000541 8.9e-08 60.1 64 57.8
CiPaw.02G191800 Carya illinoinensis HOM05D000727 ORTHO05D000541 8.9e-08 60.1 73 49.3
Duzib128G1336 Durio zibethinus HOM05D000727 ORTHO05D000541 1.5e-07 59.3 62 48.4
RcHm_v2.0_Chr1g0370021 Rosa chinensis HOM05D000727 ORTHO05D000541 5.8e-07 57.4 90 42.2
SalBow5G0590 Salvia bowleyana HOM05D000727 ORTHO05D000541 5.8e-07 57.4 66 51.5
COL.COLO4_25700 Corchorus olitorius HOM05D000727 ORTHO05D000541 7.5e-07 57.0 64 45.3
Rhsim05G0214100 Rhododendron simsii HOM05D000727 ORTHO05D000541 9.8e-07 56.6 71 49.3
SEGI_21208 Sequoiadendron giganteum HOM05D000727 ORTHO05D000541 1.3e-06 56.2 72 45.8
VMungo0331G1659 Vigna mungo HOM05D000727 ORTHO05D000541 1.3e-06 56.2 71 47.9
Manes.08G091800 Manihot esculenta HOM05D000727 ORTHO05D000541 2.9e-06 55.1 70 47.1
ClCG04G007050 Citrullus lanatus HOM05D001221 ORTHO05D009285 3.7e-06 54.7 120 36.7
Lj2C76T27 Lonicera japonica HOM05D000727 ORTHO05D000541 3.7e-06 54.7 53 60.4
Cpa.g.sc19.183 Carica papaya HOM05D000727 ORTHO05D000541 6.4e-06 53.9 75 45.3
FAN06G2531 Fragaria x ananassa HOM05D000727 ORTHO05D000541 8.3e-06 53.5 101 37.6
FAN10G3038 Fragaria x ananassa HOM05D000727 ORTHO05D000541 8.3e-06 53.5 101 37.6


User provided reference genes

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