Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G136 Trifolium pratense HOM05D005164 ORTHO05D006398 1.6e-24 115.2 55 100.0
Psat3g167280 Pisum sativum HOM05D005164 ORTHO05D006398 4.6e-19 97.1 49 93.9
Ca_25003_v3 Cicer arietinum L. HOM05D005164 ORTHO05D006398 6.0e-19 96.7 49 91.8
Lj3g0003260 Lotus japonicus HOM05D005164 ORTHO05D006398 6.0e-19 96.7 49 91.8
Phvul.011G006200 Phaseolus vulgaris HOM05D005164 ORTHO05D006398 7.9e-19 96.3 49 89.8
Medtr0173s0030 Medicago truncatula HOM05D005164 ORTHO05D006398 1.3e-18 95.5 49 91.8
Glyma.09G231100 Glycine max HOM05D005164 ORTHO05D006398 1.8e-18 95.1 49 89.8
Glyma.12G005400 Glycine max HOM05D005164 ORTHO05D006398 1.8e-18 95.1 49 89.8
VMungo1127G0366 Vigna mungo HOM05D005164 ORTHO05D006398 1.8e-18 95.1 49 89.8
CANSAT64G0480 Cannabis sativa HOM05D005164 ORTHO05D006398 3.9e-18 94.0 49 85.7
Manes.18G028500 Manihot esculenta HOM05D005164 ORTHO05D006398 1.1e-17 92.4 49 83.7
Prupe.1G381600 Prunus persica HOM05D005164 ORTHO05D006398 1.1e-17 92.4 49 83.7
Ciclev10001386m.g Citrus clementina HOM05D005164 ORTHO05D006398 1.5e-17 92.0 49 81.6
CANSAT25G0119 Cannabis sativa HOM05D005164 ORTHO05D006398 2.5e-17 91.3 49 81.6
DCAR_019523 Daucus carota HOM05D005164 ORTHO05D006398 2.5e-17 91.3 49 83.7
Nitab4.5_0000110g0500 Nicotiana tabacum HOM05D005164 ORTHO05D006398 7.4e-17 89.7 49 79.6
Nitab4.5_0010187g0010 Nicotiana tabacum HOM05D005164 ORTHO05D006398 7.4e-17 89.7 49 79.6
Peaxi162Scf00690g00117 Petunia axillaris HOM05D005164 ORTHO05D006398 7.4e-17 89.7 49 79.6
Solyc04g080160.3 Solanum lycopersicum HOM05D005164 ORTHO05D006398 7.4e-17 89.7 49 79.6
Sopen04g033750 Solanum pennellii HOM05D005164 ORTHO05D006398 7.4e-17 89.7 49 79.6
PGSC0003DMG400005163 Solanum tuberosum HOM05D005164 ORTHO05D006398 7.4e-17 89.7 49 79.6
CSS0020238 Camellia sinensis var. sinensis HOM05D005164 ORTHO05D006398 9.6e-17 89.4 49 81.6
CiPaw.15G075600 Carya illinoinensis HOM05D005164 ORTHO05D006398 9.6e-17 89.4 49 81.6
Cc10_g03080 Coffea canephora HOM05D005164 ORTHO05D006398 9.6e-17 89.4 49 79.6
Lj4C784T1 Lonicera japonica HOM05D005164 ORTHO05D006398 9.6e-17 89.4 49 81.6
Rhsim06G0035000 Rhododendron simsii HOM05D005164 ORTHO05D006398 9.6e-17 89.4 49 81.6
RcHm_v2.0_Chr6g0300751 Rosa chinensis HOM05D005164 ORTHO05D006398 9.6e-17 89.4 49 81.6
Sabra14G0141000 Salix brachista HOM05D005164 ORTHO05D006398 9.6e-17 89.4 49 81.6
TWI56G0324 Tripterygium wilfordii HOM05D005164 ORTHO05D006398 9.6e-17 89.4 49 81.6
GSVIVG01009684001 Vitis vinifera HOM05D005164 ORTHO05D006398 9.6e-17 89.4 49 81.6
Cfa018135 Carpinus fangiana HOM05D005164 ORTHO05D006398 1.3e-16 89.0 49 81.6
Haze_17990 Corylus avellana HOM05D005164 ORTHO05D006398 1.3e-16 89.0 49 81.6
Dinv36062 Davidia involucrata HOM05D005164 ORTHO05D006398 1.3e-16 89.0 49 81.6
FvH4_2g40000 Fragaria vesca HOM05D005164 ORTHO05D006398 1.3e-16 89.0 49 79.6
FAN15G2586 Fragaria x ananassa HOM05D005164 ORTHO05D006398 1.3e-16 89.0 49 79.6
FAN27G0257 Fragaria x ananassa HOM05D005164 ORTHO05D006398 1.3e-16 89.0 49 79.6
Hma1.2p1_0469F.1_g159190 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 1.3e-16 89.0 49 79.6
Potri.002G263200 Populus trichocarpa HOM05D005164 ORTHO05D006398 1.3e-16 89.0 46 89.1
QL02p007897 Quercus lobata HOM05D005164 ORTHO05D006398 1.3e-16 89.0 48 81.2
Eucgr.F01909 Eucalyptus grandis HOM05D005164 ORTHO05D006398 1.6e-16 88.6 49 77.6
SalBow8G2733 Salvia bowleyana HOM05D005164 ORTHO05D006398 1.6e-16 88.6 49 77.6
CiPaw.16G055400 Carya illinoinensis HOM05D005164 ORTHO05D006398 2.1e-16 88.2 49 81.6
TAR376G0296 Trochodendron aralioides HOM05D005164 ORTHO05D006398 2.1e-16 88.2 49 79.6
Duzib041G0411 Durio zibethinus HOM05D005164 ORTHO05D006398 2.8e-16 87.8 49 79.6
Gohir.A03G078200 Gossypium hirsutum HOM05D005164 ORTHO05D006398 2.8e-16 87.8 49 79.6
Gohir.D02G094300 Gossypium hirsutum HOM05D005164 ORTHO05D006398 2.8e-16 87.8 49 79.6
Gorai.005G107200 Gossypium raimondii HOM05D005164 ORTHO05D006398 2.8e-16 87.8 49 79.6
Hma1.2p1_0023F.1_g014900 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 2.8e-16 87.8 52 78.8
SGA_v2.0_scaffold326G48708 Striga asiatica HOM05D005164 ORTHO05D006398 2.8e-16 87.8 49 75.5
Gohir.A05G260000 Gossypium hirsutum HOM05D005164 ORTHO05D006398 3.7e-16 87.4 49 77.6
MBI17_g35116_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 3.7e-16 87.4 46 87.0
MBI17_g39721_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 3.7e-16 87.4 46 87.0
MD08G1033300 Malus domestica HOM05D005164 ORTHO05D006398 3.7e-16 87.4 49 79.6
Actinidia15313 Actinidia chinensis HOM05D005164 ORTHO05D006398 4.8e-16 87.0 46 84.8
ATR0733G076 Amborella trichopoda HOM05D005164 ORTHO05D006398 4.8e-16 87.0 49 79.6
CAN.G1126.40 Capsicum annuum HOM05D005164 ORTHO05D006398 4.8e-16 87.0 49 77.6
FAN20G1227 Fragaria x ananassa HOM05D005164 ORTHO05D006398 4.8e-16 87.0 49 77.6
Gohir.A01G116500 Gossypium hirsutum HOM05D005164 ORTHO05D006398 4.8e-16 87.0 46 84.8
MD15G1029900 Malus domestica HOM05D005164 ORTHO05D006398 6.2e-16 86.7 49 79.6
Nn5g29540 Nelumbo nucifera HOM05D005164 ORTHO05D006398 6.2e-16 86.7 49 77.6
Oeu009868.2 Olea europaea HOM05D005164 ORTHO05D006398 6.2e-16 86.7 49 77.6
Potri.014G180800 Populus trichocarpa HOM05D005164 ORTHO05D006398 6.2e-16 86.7 49 79.6
PGR031G3751 Punica granatum HOM05D005164 ORTHO05D006398 6.2e-16 86.7 49 79.6
THA.LOC104814156 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 6.2e-16 86.7 49 77.6
THA.LOC104822841 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 6.2e-16 86.7 49 77.6
Thecc.08G024200 Theobroma cacao HOM05D005164 ORTHO05D006398 6.2e-16 86.7 49 77.6
Zm00001eb008060 Zea mays HOM05D005164 ORTHO05D006398 6.2e-16 86.7 49 77.6
Aqoxy6G01049 Aquilegia oxysepala HOM05D005164 ORTHO05D006398 8.2e-16 86.3 49 79.6
COL.COLO4_26343 Corchorus olitorius HOM05D005164 ORTHO05D006398 8.2e-16 86.3 49 77.6
Gohir.D01G104900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.1e-15 85.9 49 75.5
Gorai.002G128900 Gossypium raimondii HOM05D005164 ORTHO05D006398 1.1e-15 85.9 49 75.5
vmacro21627 Vaccinium macrocarpon HOM05D005164 ORTHO05D006398 1.1e-15 85.9 46 82.6
CARHR181050 Cardamine hirsuta HOM05D005164 ORTHO05D006398 1.4e-15 85.5 49 77.6
ECA247G1488 Erigeron canadensis HOM05D005164 ORTHO05D006398 1.4e-15 85.5 49 77.6
HanXRQChr02g0040181 Helianthus annuus HOM05D005164 ORTHO05D006398 1.4e-15 85.5 49 77.6
Hund21200 Selenicereus undatus HOM05D005164 ORTHO05D006398 1.4e-15 85.5 49 75.5
CDE01G0241 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 1.8e-15 85.1 49 75.5
AUR62031100 Chenopodium quinoa HOM05D005164 ORTHO05D006398 1.8e-15 85.1 49 75.5
MSTRG.24294 Avicennia marina HOM05D005164 ORTHO05D006398 2.4e-15 84.7 49 71.4
Duzib093G0265 Durio zibethinus HOM05D005164 ORTHO05D006398 2.4e-15 84.7 49 75.5
EL10Ac8g20456 Beta vulgaris HOM05D005164 ORTHO05D006398 3.1e-15 84.3 49 73.5
ClCG05G019140 Citrullus lanatus HOM05D005164 ORTHO05D006398 3.1e-15 84.3 49 75.5
MELO3C003848.2 Cucumis melo HOM05D005164 ORTHO05D006398 3.1e-15 84.3 49 75.5
CsaV3_3G045000 Cucumis sativus L. HOM05D005164 ORTHO05D006398 3.1e-15 84.3 49 75.5
Gohir.D05G261900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 3.1e-15 84.3 49 75.5
Gorai.009G273800 Gossypium raimondii HOM05D005164 ORTHO05D006398 3.1e-15 84.3 49 75.5
AL8G17800 Arabidopsis lyrata HOM05D005164 ORTHO05D006398 4.0e-15 84.0 49 75.5
Carub.0008s0578 Capsella rubella HOM05D005164 ORTHO05D006398 4.0e-15 84.0 49 75.5
Os03g0197400 Oryza sativa ssp. japonica HOM05D005164 ORTHO05D006398 4.0e-15 84.0 49 73.5
Sp2g07720 Schrenkiella parvula HOM05D005164 ORTHO05D006398 4.0e-15 84.0 49 75.5
Sc02g0006310 Simmondsia chinensis HOM05D005164 ORTHO05D006398 5.3e-15 83.6 49 73.5
CDE02G4403 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 6.9e-15 83.2 49 73.5
Lsat_1_v5_gn_1_17561 Lactuca sativa HOM05D005164 ORTHO05D006398 6.9e-15 83.2 49 73.5
CAN.G416.53 Capsicum annuum HOM05D005164 ORTHO05D006398 9.0e-15 82.8 49 73.5
BcaC02g10785 Brassica carinata HOM05D005164 ORTHO05D006398 1.5e-14 82.0 49 73.5
BcaC06g31734 Brassica carinata HOM05D005164 ORTHO05D006398 1.5e-14 82.0 49 73.5
A06p48120 Brassica napus HOM05D005164 ORTHO05D006398 1.5e-14 82.0 49 73.5
C04p25110 Brassica napus HOM05D005164 ORTHO05D006398 1.5e-14 82.0 49 73.5
BolC4t24015H Brassica oleracea HOM05D005164 ORTHO05D006398 1.5e-14 82.0 49 73.5
BraA06t27681Z Brassica rapa HOM05D005164 ORTHO05D006398 1.5e-14 82.0 49 73.5
PSO541G6137 Papaver somniferum HOM05D005164 ORTHO05D006398 1.5e-14 82.0 49 73.5
PSO675G3600 Papaver somniferum HOM05D005164 ORTHO05D006398 1.5e-14 82.0 49 73.5
SMO364G0673 Selaginella moellendorffii HOM05D005164 ORTHO05D006398 2.6e-14 81.3 49 75.5
AT5G42970 Arabidopsis thaliana HOM05D005164 ORTHO05D006398 3.4e-14 80.9 49 73.5
BcaB07g30597 Brassica carinata HOM05D005164 ORTHO05D006398 3.4e-14 80.9 49 71.4
BcaC03g16546 Brassica carinata HOM05D005164 ORTHO05D006398 3.4e-14 80.9 49 71.4
A02p27610 Brassica napus HOM05D005164 ORTHO05D006398 3.4e-14 80.9 49 71.4
C02p43640 Brassica napus HOM05D005164 ORTHO05D006398 3.4e-14 80.9 49 71.4
BolC2t10406H Brassica oleracea HOM05D005164 ORTHO05D006398 3.4e-14 80.9 49 71.4
BraA02t07794Z Brassica rapa HOM05D005164 ORTHO05D006398 3.4e-14 80.9 49 71.4
AUR62014895 Chenopodium quinoa HOM05D005164 ORTHO05D006398 7.6e-14 79.7 49 71.4
Thhalv10003436m.g Eutrema salsugineum HOM05D005164 ORTHO05D006398 7.6e-14 79.7 49 71.4
Sed0001534 Sechium edule HOM05D005164 ORTHO05D006398 7.6e-14 79.7 50 74.0
Sed0021376 Sechium edule HOM05D005164 ORTHO05D006398 1.0e-13 79.3 49 71.4
Mapoly0072s0034 Marchantia polymorpha HOM05D005164 ORTHO05D006398 1.3e-13 79.0 49 71.4
Aa31LG9G13090 Aethionema arabicum HOM05D005164 ORTHO05D006398 3.8e-13 77.4 44 77.3
AagrBONN_evm.TU.Sc2ySwM_117.2514 Anthoceros agrestis HOM05D005164 ORTHO05D006398 1.1e-12 75.9 49 69.4
Migut.N00498 Erythranthe guttata HOM05D005164 ORTHO05D006398 4.2e-12 73.9 49 63.3
Pp3c5_28450 Physcomitrium patens HOM05D005164 ORTHO05D006398 1.2e-11 72.4 49 65.3
unitig_22.g6774 Utricularia gibba HOM05D005164 ORTHO05D006398 1.5e-09 65.5 46 63.0
CBR_g36268 Chara braunii HOM05D005164 ORTHO05D006398 8.2e-08 59.7 49 53.1


User provided reference genes

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