Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13099 Trifolium pratense HOM05D000272 ORTHO05D000164 7.7e-243 843.6 483 100.0
Medtr1g016490 Medicago truncatula HOM05D000272 ORTHO05D000164 7.1e-164 581.3 481 68.4
Psat6g019760 Pisum sativum HOM05D000272 ORTHO05D000164 1.6e-163 580.1 498 68.1
Ca_13174_v3 Cicer arietinum L. HOM05D000272 ORTHO05D000164 1.9e-153 546.6 498 65.5
VMungo0647G0054 Vigna mungo HOM05D000272 ORTHO05D000164 5.7e-113 412.1 521 49.5
Phvul.001G034200 Phaseolus vulgaris HOM05D000272 ORTHO05D000164 2.2e-112 410.2 521 50.1
arahy.Tifrunner.gnm1.ann1.WUKV82 Arachis hypogaea HOM05D000272 ORTHO05D000164 2.5e-108 396.7 519 50.1
Glyma.17G230000 Glycine max HOM05D000272 ORTHO05D000164 3.1e-103 379.8 512 47.9
Glyma.04G050800 Glycine max HOM05D000272 ORTHO05D000164 9.1e-103 378.3 520 47.9
arahy.Tifrunner.gnm1.ann1.4HW5AH Arachis hypogaea HOM05D000272 ORTHO05D000164 5.0e-101 372.5 502 48.6
Lj5g0011394 Lotus japonicus HOM05D000272 ORTHO05D000164 9.4e-100 368.2 511 49.7
Glyma.06G051600 Glycine max HOM05D000272 ORTHO05D000164 2.7e-99 366.7 522 47.5
Phvul.009G077100 Phaseolus vulgaris HOM05D000272 ORTHO05D000164 2.3e-93 347.1 518 45.8
VMungo1309G2321 Vigna mungo HOM05D000272 ORTHO05D000164 1.9e-92 344.0 513 45.6
Lalb_Chr11g0063111 Lupinus albus HOM05D000272 ORTHO05D000164 3.3e-92 343.2 533 45.6
Lalb_Chr23g0267751 Lupinus albus HOM05D000272 ORTHO05D000164 2.6e-89 333.6 532 45.1
Lj1g0017549 Lotus japonicus HOM05D000272 ORTHO05D000164 2.0e-81 307.4 491 47.0
QL02p001377 Quercus lobata HOM05D000272 ORTHO05D000164 3.9e-61 240.0 539 36.4
CiPaw.15G040000 Carya illinoinensis HOM05D000272 ORTHO05D000164 5.1e-61 239.6 539 37.5
Manes.03G047300 Manihot esculenta HOM05D000272 ORTHO05D000164 6.8e-58 229.2 534 37.1
Prupe.1G413700 Prunus persica HOM05D000272 ORTHO05D000164 1.2e-57 228.4 533 36.2
Ciclev10010212m.g Citrus clementina HOM05D000272 ORTHO05D000164 3.4e-57 226.9 546 37.2
Gorai.001G023100 Gossypium raimondii HOM05D000272 ORTHO05D000164 5.8e-57 226.1 541 36.8
Gohir.D07G022500 Gossypium hirsutum HOM05D000272 ORTHO05D000164 9.9e-57 225.3 537 37.1
Manes.16G079300 Manihot esculenta HOM05D000272 ORTHO05D000164 3.8e-56 223.4 529 36.1
Thecc.09G052700 Theobroma cacao HOM05D000272 ORTHO05D000164 2.4e-55 220.7 540 35.9
Duzib150G1201 Durio zibethinus HOM05D000272 ORTHO05D000164 7.1e-55 219.2 540 34.8
Duzib187G0615 Durio zibethinus HOM05D000272 ORTHO05D000164 1.6e-54 218.0 541 37.5
Gohir.A07G022116 Gossypium hirsutum HOM05D000272 ORTHO05D000164 1.1e-52 211.8 534 35.8
COL.COLO4_21044 Corchorus olitorius HOM05D000272 ORTHO05D000164 1.5e-52 211.5 541 35.1
TWI32G1306 Tripterygium wilfordii HOM05D000272 ORTHO05D000164 2.5e-52 210.7 538 34.9
Dinv27977 Davidia involucrata HOM05D000272 ORTHO05D000164 5.6e-52 209.5 547 34.6
RcHm_v2.0_Chr6g0310681 Rosa chinensis HOM05D000272 ORTHO05D000164 1.6e-51 208.0 537 34.6
Sabra18G0049400 Salix brachista HOM05D000272 ORTHO05D000164 2.1e-51 207.6 424 37.5
CiPaw.16G029100 Carya illinoinensis HOM05D000272 ORTHO05D000164 4.8e-51 206.5 542 34.3
Duzib168G0983 Durio zibethinus HOM05D000272 ORTHO05D000164 6.2e-51 206.1 539 34.9
Sabra06G0178900 Salix brachista HOM05D000272 ORTHO05D000164 1.8e-50 204.5 550 34.0
TWI34G1359 Tripterygium wilfordii HOM05D000272 ORTHO05D000164 2.4e-50 204.1 389 39.3
TAR626G1020 Trochodendron aralioides HOM05D000272 ORTHO05D000164 6.9e-50 202.6 338 42.6
MD15G1061000 Malus domestica HOM05D000272 ORTHO05D000164 4.9e-48 196.4 527 33.0
CSS0006877 Camellia sinensis var. sinensis HOM05D000272 ORTHO05D000164 1.9e-47 194.5 355 42.3
CSS0026906 Camellia sinensis var. sinensis HOM05D000272 ORTHO05D000164 7.1e-47 192.6 342 42.4
FAN27G1277 Fragaria x ananassa HOM05D000272 ORTHO05D000164 3.5e-46 190.3 531 33.1
FAN24G1584 Fragaria x ananassa HOM05D000577 ORTHO05D000164 4.6e-46 189.9 545 32.8
Potri.006G230700 Populus trichocarpa HOM05D000272 ORTHO05D000164 7.8e-46 189.1 546 32.6
FAN15G3216 Fragaria x ananassa HOM05D000272 ORTHO05D000164 1.0e-45 188.7 535 33.3
FvH4_2g32060 Fragaria vesca HOM05D000272 ORTHO05D000164 3.0e-45 187.2 545 32.5
Dinv23432 Davidia involucrata HOM05D000272 ORTHO05D000164 8.7e-45 185.7 357 40.6
FAN20G0304 Fragaria x ananassa HOM05D000272 ORTHO05D000164 1.5e-44 184.9 539 32.7
Eucgr.C03024 Eucalyptus grandis HOM05D000272 ORTHO05D000164 1.9e-44 184.5 519 33.5
Actinidia30307 Actinidia chinensis HOM05D000272 ORTHO05D000164 5.6e-44 183.0 529 34.2
GSVIVG01035361001 Vitis vinifera HOM05D000272 ORTHO05D000164 7.3e-44 182.6 291 45.0
Hma1.2p1_0482F.1_g162600 Hydrangea macrophylla HOM05D000272 ORTHO05D000164 2.8e-43 180.6 517 34.0
Sopen08g019010 Solanum pennellii HOM05D000272 ORTHO05D000164 1.8e-42 177.9 334 38.9
TAR383G0776 Trochodendron aralioides HOM05D000272 ORTHO05D000164 1.8e-42 177.9 342 39.8
TAR624G0764 Trochodendron aralioides HOM05D000272 ORTHO05D000164 1.2e-41 175.3 340 38.8
MD08G1043600 Malus domestica HOM05D000272 ORTHO05D000164 1.5e-41 174.9 526 32.3
Solyc08g065420.3 Solanum lycopersicum HOM05D000272 ORTHO05D000164 2.0e-41 174.5 336 39.0
Potri.018G054700 Populus trichocarpa HOM05D000272 ORTHO05D000164 4.5e-41 173.3 534 33.1
PGSC0003DMG400029946 Solanum tuberosum HOM05D000272 ORTHO05D000164 9.9e-41 172.2 454 33.7
Cc08_g10440 Coffea canephora HOM05D000272 ORTHO05D000164 3.8e-40 170.2 343 39.7
Peaxi162Scf00136g00045 Petunia axillaris HOM05D000272 ORTHO05D000164 3.8e-40 170.2 359 37.9
Nitab4.5_0001584g0080 Nicotiana tabacum HOM05D000272 ORTHO05D000164 3.2e-39 167.2 340 38.2
EL10Ac2g03900 Beta vulgaris HOM05D000272 ORTHO05D000164 9.3e-39 165.6 468 34.0
Hund19465 Selenicereus undatus HOM05D000272 ORTHO05D000164 9.3e-39 165.6 356 38.8
Thhalv10025083m.g Eutrema salsugineum HOM05D000272 ORTHO05D000164 2.7e-38 164.1 422 35.1
MSTRG.11664 Avicennia marina HOM05D000272 ORTHO05D000164 7.9e-38 162.5 316 38.0
AUR62009161 Chenopodium quinoa HOM05D000272 ORTHO05D000164 7.9e-38 162.5 477 32.7
Nn6g35429 Nelumbo nucifera HOM05D000272 ORTHO05D000164 7.9e-38 162.5 362 38.4
AUR62022061 Chenopodium quinoa HOM05D000272 ORTHO05D000164 1.8e-37 161.4 459 33.3
CANSAT25G2775 Cannabis sativa HOM05D000272 ORTHO05D000164 3.0e-37 160.6 455 33.6
Nn8g38910 Nelumbo nucifera HOM05D000272 ORTHO05D000164 3.9e-37 160.2 407 34.6
Oeu018649.1 Olea europaea HOM05D000272 ORTHO05D000164 5.1e-37 159.8 462 33.5
Rhsim11G0044800 Rhododendron simsii HOM05D000272 ORTHO05D000164 6.7e-37 159.5 333 38.7
CAN.G117.4 Capsicum annuum HOM05D000272 ORTHO05D000164 8.7e-37 159.1 455 33.4
THA.LOC104803732 Tarenaya hassleriana HOM05D000272 ORTHO05D000164 1.5e-36 158.3 410 35.1
ClCG08G016970 Citrullus lanatus HOM05D000272 ORTHO05D000164 2.5e-36 157.5 347 35.4
DCAR_004433 Daucus carota HOM05D000272 ORTHO05D000164 2.5e-36 157.5 333 36.9
Nitab4.5_0004160g0020 Nicotiana tabacum HOM05D000272 ORTHO05D000164 1.6e-35 154.8 251 41.8
CsaV3_2G025630 Cucumis sativus L. HOM05D000272 ORTHO05D000164 2.8e-35 154.1 327 36.1
Sed0016305 Sechium edule HOM05D000272 ORTHO05D000164 4.8e-35 153.3 444 30.0
CARHR240990 Cardamine hirsuta HOM05D000272 ORTHO05D000164 8.1e-35 152.5 424 35.8
PGR044G0114 Punica granatum HOM05D000272 ORTHO05D000164 3.1e-34 150.6 324 37.0
Carub.0007s0750 Capsella rubella HOM05D000272 ORTHO05D000164 4.0e-34 150.2 452 33.6
Ah.11g044710 Amaranthus hybridus HOM05D000272 ORTHO05D000164 6.9e-34 149.4 504 31.3
Aqoxy7G01252 Aquilegia oxysepala HOM05D001205 ORTHO05D001087 6.9e-34 149.4 349 37.2
BolC1t00549H Brassica oleracea HOM05D000272 ORTHO05D000164 9.0e-34 149.1 285 41.1
AT4G32980 Arabidopsis thaliana HOM05D000272 ORTHO05D000164 1.5e-33 148.3 456 33.3
Actinidia14708 Actinidia chinensis HOM05D000272 ORTHO05D000164 2.6e-33 147.5 343 36.4
MELO3C010759.2 Cucumis melo HOM05D000272 ORTHO05D000164 2.6e-33 147.5 328 35.1
MELO3C030120.2 Cucumis melo HOM05D000272 ORTHO05D000164 3.4e-33 147.1 327 35.2
AL7G18710 Arabidopsis lyrata HOM05D000272 ORTHO05D000164 7.6e-33 146.0 428 34.3
Cpa.g.sc78.15 Carica papaya HOM05D000272 ORTHO05D000164 2.9e-32 144.1 330 35.8
vmacro00150 Vaccinium macrocarpon HOM05D000272 ORTHO05D000164 4.9e-32 143.3 510 29.6
Oeu047117.2 Olea europaea HOM05D000272 ORTHO05D000164 1.4e-31 141.7 315 35.6
DCAR_007725 Daucus carota HOM05D000272 ORTHO05D000164 2.5e-31 141.0 333 34.8
SalBow1G5080 Salvia bowleyana HOM05D000272 ORTHO05D000164 2.5e-31 141.0 318 36.2
A03p61730 Brassica napus HOM05D000272 ORTHO05D000164 7.1e-31 139.4 417 31.4
C01p05690 Brassica napus HOM05D000272 ORTHO05D000164 9.3e-31 139.0 425 33.6
PSO210G7454 Papaver somniferum HOM05D000272 ORTHO05D000164 1.6e-30 138.3 306 36.9
Sp7g30750 Schrenkiella parvula HOM05D000272 ORTHO05D000164 2.1e-30 137.9 423 33.1
BcaC09g52096 Brassica carinata HOM05D000272 ORTHO05D000164 3.5e-30 137.1 433 33.0
BraA03t15211Z Brassica rapa HOM05D000272 ORTHO05D000164 3.5e-30 137.1 417 31.2
Sc23g0005580 Simmondsia chinensis HOM05D000272 ORTHO05D000164 3.5e-30 137.1 297 37.0
BcaNung02149 Brassica carinata HOM05D000272 ORTHO05D000164 4.6e-30 136.7 420 32.1
BolC7t46388H Brassica oleracea HOM05D000272 ORTHO05D000164 6.0e-30 136.3 450 30.4
C07p59450 Brassica napus HOM05D000272 ORTHO05D000164 1.0e-29 135.6 451 30.4
BraA01t00503Z Brassica rapa HOM05D000272 ORTHO05D000164 1.0e-29 135.6 418 33.3
A01p05200 Brassica napus HOM05D000272 ORTHO05D000164 3.0e-29 134.0 418 33.0
HanXRQChr17g0538451 Helianthus annuus HOM05D000272 ORTHO05D000164 1.1e-28 132.1 497 30.2
MSTRG.14049 Avicennia marina HOM05D000272 ORTHO05D000164 1.5e-28 131.7 331 33.8
AUR62044382 Chenopodium quinoa HOM05D000272 ORTHO05D000164 3.3e-28 130.6 408 32.4
MBI01_g02262_MAGBIO Magnolia biondii HOM05D000272 ORTHO05D000164 3.3e-28 130.6 350 32.6
HanXRQChr06g0173841 Helianthus annuus HOM05D000272 ORTHO05D000164 7.4e-28 129.4 488 29.9
MBI04_g11712_MAGBIO Magnolia biondii HOM05D000272 ORTHO05D000164 3.7e-27 127.1 342 31.6
ECA246G4237 Erigeron canadensis HOM05D000272 ORTHO05D000164 4.0e-26 123.6 313 34.2
Lsat_1_v5_gn_3_24340 Lactuca sativa HOM05D000272 ORTHO05D000164 5.3e-26 123.2 293 36.2
Aa31LG5G9720 Aethionema arabicum HOM05D000272 ORTHO05D000164 1.5e-25 121.7 292 36.0
BolC1t00574H Brassica oleracea HOM05D000272 ORTHO05D000164 5.0e-24 116.7 425 31.3
unitig_0.g2561 Utricularia gibba HOM05D000272 ORTHO05D000164 5.0e-24 116.7 267 34.5
Migut.A00142 Erythranthe guttata HOM05D000272 ORTHO05D000164 3.2e-23 114.0 299 38.1
Lj7A277T21 Lonicera japonica HOM05D000272 ORTHO05D000164 5.5e-23 113.2 235 35.7
A01p05240 Brassica napus HOM05D000272 ORTHO05D000164 1.2e-22 112.1 152 45.4
PSO063G0664 Papaver somniferum HOM05D000272 ORTHO05D000164 1.6e-22 111.7 470 27.7
SalBow4G0202 Salvia bowleyana HOM05D000272 ORTHO05D000164 1.0e-21 109.0 333 31.5
SGA_v2.0_scaffold169G38685 Striga asiatica HOM05D000272 ORTHO05D000164 5.1e-21 106.7 264 31.4
unitig_748.g7521 Utricularia gibba HOM05D000272 ORTHO05D000164 5.7e-20 103.2 302 36.4
PSO832G0977 Papaver somniferum HOM05D000272 ORTHO05D000164 4.8e-19 100.1 476 26.5
SGA_v2.0_scaffold163G38035 Striga asiatica HOM05D000272 ORTHO05D000164 9.0e-18 95.9 171 37.4
BolC1t00552H Brassica oleracea HOM05D000272 ORTHO05D000164 2.9e-16 90.9 122 44.3
CDE02G2890 Ceratophyllum demersum HOM05D000272 ORTHO05D000164 5.0e-16 90.1 447 26.6
Actinidia01194 Actinidia chinensis HOM05D000272 ORTHO05D000164 6.1e-14 83.2 388 30.2
C01p05720 Brassica napus HOM05D000272 ORTHO05D037977 1.1e-12 79.0 51 72.5
HPP92_003946 Vanilla planifolia HOM05D000272 ORTHO05D000164 7.4e-12 76.3 313 28.8
Rhsim07G0142800 Rhododendron simsii HOM05D000272 ORTHO05D000164 2.8e-11 74.3 177 40.1
Duzib128G1756 Durio zibethinus HOM05D000272 ORTHO05D000164 4.7e-06 57.0 369 24.9


User provided reference genes

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