Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13 Trifolium pratense HOM05D056072 ORTHO05D000275 4.5e-36 154.1 78 100.0
Medtr5g013010 Medicago truncatula HOM05D000393 ORTHO05D000275 3.0e-24 114.8 79 82.3
Psat2g177440 Pisum sativum HOM05D000393 ORTHO05D000275 4.9e-22 107.5 81 84.0
Glyma.05G062700 Glycine max HOM05D000393 ORTHO05D000275 5.4e-21 104.0 79 75.9
Glyma.17G144700 Glycine max HOM05D000393 ORTHO05D000275 4.5e-20 100.9 79 75.9
Phvul.003G223200 Phaseolus vulgaris HOM05D000393 ORTHO05D000275 3.6e-17 91.3 79 73.4
TPR.G29092 Trifolium pratense HOM05D056072 ORTHO05D413059 3.6e-17 91.3 49 91.8
VMungo0251G2625 Vigna mungo HOM05D000393 ORTHO05D000275 6.1e-17 90.5 78 69.2
Lj4g0003446 Lotus japonicus HOM05D000393 ORTHO05D000275 1.8e-16 89.0 79 73.4
Ca_24589_v3 Cicer arietinum L. HOM05D000393 ORTHO05D000275 1.3e-14 82.8 81 72.8
Lalb_Chr16g0379461 Lupinus albus HOM05D000393 ORTHO05D000275 6.3e-14 80.5 77 68.8
Dinv21669 Davidia involucrata HOM05D000393 ORTHO05D000275 1.2e-12 76.3 78 62.8
GSVIVG01005821001 Vitis vinifera HOM05D000393 ORTHO05D000275 1.2e-12 76.3 83 65.1
CiPaw.12G049500 Carya illinoinensis HOM05D000393 ORTHO05D000275 7.8e-12 73.6 81 64.2
Peaxi162Scf00190g01523 Petunia axillaris HOM05D000393 ORTHO05D000275 1.7e-11 72.4 82 57.3
CiPaw.11G082700 Carya illinoinensis HOM05D000393 ORTHO05D000275 2.9e-11 71.6 80 63.8
Ciclev10021374m.g Citrus clementina HOM05D000393 ORTHO05D000275 6.6e-11 70.5 78 60.3
Dinv39177 Davidia involucrata HOM05D000393 ORTHO05D000275 1.5e-10 69.3 79 63.3
Lj2A225T46 Lonicera japonica HOM05D000393 ORTHO05D000275 1.6e-09 65.9 81 55.6
Lalb_Chr09g0324291 Lupinus albus HOM05D000393 ORTHO05D000275 1.6e-09 65.9 78 59.0
Phvul.002G056300 Phaseolus vulgaris HOM05D000393 ORTHO05D000275 1.6e-09 65.9 79 54.4
Duzib084G1196 Durio zibethinus HOM05D000393 ORTHO05D000275 2.1e-09 65.5 80 58.8
Glyma.11G035900 Glycine max HOM05D000393 ORTHO05D000275 8.0e-09 63.5 79 57.0
Hma1.2p1_1196F.1_g266020 Hydrangea macrophylla HOM05D000393 ORTHO05D000275 8.0e-09 63.5 77 59.7
Hma1.2p1_1335F.1_g276360 Hydrangea macrophylla HOM05D000393 ORTHO05D000275 8.0e-09 63.5 77 59.7
Thecc.03G246900 Theobroma cacao HOM05D000393 ORTHO05D000275 8.0e-09 63.5 84 60.7
MBI04_g34108_MAGBIO Magnolia biondii HOM05D000393 ORTHO05D000275 1.0e-08 63.2 79 57.0
Rhsim07G0115400 Rhododendron simsii HOM05D000393 ORTHO05D000275 1.4e-08 62.8 79 58.2
Nitab4.5_0000185g0030 Nicotiana tabacum HOM05D000393 ORTHO05D000275 3.1e-08 61.6 81 56.8
TAR374G1705 Trochodendron aralioides HOM05D000393 ORTHO05D000275 3.1e-08 61.6 79 59.5
arahy.Tifrunner.gnm1.ann1.L2HUY0 Arachis hypogaea HOM05D000393 ORTHO05D000275 4.0e-08 61.2 80 51.2
arahy.Tifrunner.gnm1.ann1.WNIN40 Arachis hypogaea HOM05D000393 ORTHO05D000275 4.0e-08 61.2 80 51.2
Haze_07936 Corylus avellana HOM05D000393 ORTHO05D000275 4.0e-08 61.2 88 56.8
FvH4_5g19570 Fragaria vesca HOM05D000393 ORTHO05D000275 4.0e-08 61.2 89 59.6
CSS0006191 Camellia sinensis var. sinensis HOM05D000393 ORTHO05D000275 5.2e-08 60.8 81 60.5
FAN18G3355 Fragaria x ananassa HOM05D000393 ORTHO05D000275 5.2e-08 60.8 89 59.6
FAN08G1066 Fragaria x ananassa HOM05D000393 ORTHO05D000275 6.8e-08 60.5 88 55.7
QL12p011163 Quercus lobata HOM05D000393 ORTHO05D000275 1.2e-07 59.7 78 57.7
Actinidia10845 Actinidia chinensis HOM05D000393 ORTHO05D000275 1.5e-07 59.3 79 58.2
FAN04G0877 Fragaria x ananassa HOM05D000393 ORTHO05D000275 1.5e-07 59.3 90 57.8
Potri.003G079800 Populus trichocarpa HOM05D000393 ORTHO05D000275 1.5e-07 59.3 81 55.6
Manes.01G084500 Manihot esculenta HOM05D000393 ORTHO05D000275 3.4e-07 58.2 78 52.6
Potri.001G155100 Populus trichocarpa HOM05D000393 ORTHO05D000275 5.8e-07 57.4 81 55.6
Duzib205G0243 Durio zibethinus HOM05D000393 ORTHO05D000275 9.8e-07 56.6 83 51.8
Duzib068G0361 Durio zibethinus HOM05D000393 ORTHO05D000275 1.3e-06 56.2 85 55.3
Nn6g33851 Nelumbo nucifera HOM05D000393 ORTHO05D000275 1.7e-06 55.8 79 55.7
Manes.02G041800 Manihot esculenta HOM05D000393 ORTHO05D000275 3.7e-06 54.7 80 53.8
Sabra03G0049700 Salix brachista HOM05D000393 ORTHO05D000275 4.9e-06 54.3 81 51.9
THA.LOC104812769 Tarenaya hassleriana HOM05D000393 ORTHO05D000275 4.9e-06 54.3 78 51.3
Lsat_1_v5_gn_6_93540 Lactuca sativa HOM05D000393 ORTHO05D000275 6.4e-06 53.9 81 49.4
TWI81G0927 Tripterygium wilfordii HOM05D000393 ORTHO05D000275 6.4e-06 53.9 79 53.2
TAR629G1220 Trochodendron aralioides HOM05D000393 ORTHO05D000275 6.4e-06 53.9 79 57.0
TAR629G2078 Trochodendron aralioides HOM05D000393 ORTHO05D000275 6.4e-06 53.9 79 57.0
Cpa.g.sc89.64 Carica papaya HOM05D000393 ORTHO05D000275 8.3e-06 53.5 85 50.6
MD06G1054800 Malus domestica HOM05D000393 ORTHO05D000275 8.3e-06 53.5 88 50.0
PGSC0003DMG400026264 Solanum tuberosum HOM05D000393 ORTHO05D000275 8.3e-06 53.5 79 51.9


User provided reference genes

Program Settings