Gene: Potri.003G079800

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.003G079800
  • Transcript Identifier Potri.003G079800.3
  • Gene Type Coding gene
  • Location Chr03 : 10700714-10702434 : positive

Gene Family Information

  • ID HOM05D000393
  • #Genes/#Species 1261/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.003G079800.v4.1
  • pacid 42786835
  • synonym Pt-HAT1.4

Descriptions

  • Description PF00046//PF02183//PF04618 - Homeobox domain (Homeobox) // Homeobox associated leucine zipper (HALZ) // HD-ZIP protein N terminus (HD-ZIP_N)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT4G16780
GO:0080191
ISO
PLAZA Integrative Orthologysecondary thickening AT4G16780
GO:0010311
ISO
PLAZA Integrative Orthologylateral root formation AT4G16780
GO:0010016
ISO
PLAZA Integrative Orthologyshoot system morphogenesis AT4G16780
GO:0010017
ISO
PLAZA Integrative Orthologyred or far-red light signaling pathway AT4G16780
GO:0010218
ISO
PLAZA Integrative Orthologyresponse to far red light AT4G16780
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT4G16780
GO:0009826
ISO
PLAZA Integrative Orthologyunidimensional cell growth AT4G16780
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT4G16780
GO:0009735
ISO
PLAZA Integrative Orthologyresponse to cytokinin AT4G16780
GO:0009641
ISO
PLAZA Integrative Orthologyshade avoidance AT4G16780
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G16780
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT4G16780
GO:0003677
IEA
InterProDNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006712 HD-ZIP protein, N-terminal
IPR003106 Leucine zipper, homeobox-associated
IPR009057 Homeobox-like domain superfamily
IPR001356 Homeobox domain
IPR000047 Helix-turn-helix motif
Mapman id Description
15.5.3.1 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II)