Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G12299 Trifolium pratense HOM05D007699 ORTHO05D009796 8.0e-51 203.4 96 100.0
Phvul.008G062500 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 3.7e-16 88.2 52 78.8
TPR.G38695 Trifolium pratense HOM05D000020 ORTHO05D000543 3.7e-16 88.2 40 97.5
Hma1.2p1_0886F.1_g232660 Hydrangea macrophylla HOM05D007699 ORTHO05D009796 8.3e-16 87.0 44 86.4
Hma1.2p1_0886F.1_g232685 Hydrangea macrophylla HOM05D007699 ORTHO05D009796 8.3e-16 87.0 44 86.4
EL10Ac6g13349 Beta vulgaris HOM05D007699 ORTHO05D009796 1.1e-15 86.7 81 55.6
FAN18G1300 Fragaria x ananassa HOM05D005738 ORTHO05D007135 1.1e-15 86.7 42 92.9
FAN18G3749 Fragaria x ananassa HOM05D005738 ORTHO05D007135 1.1e-15 86.7 42 92.9
A05p18230 Brassica napus HOM05D007699 ORTHO05D009796 1.4e-15 86.3 72 62.5
Potri.011G103301 Populus trichocarpa HOM05D007699 ORTHO05D009796 1.4e-15 86.3 50 76.0
Potri.011G103401 Populus trichocarpa HOM05D007699 ORTHO05D009796 1.4e-15 86.3 52 73.1
Phvul.001G084100 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 2.4e-15 85.5 41 90.2
Medtr3g105890 Medicago truncatula HOM05D007699 ORTHO05D009796 3.2e-15 85.1 41 92.7
arahy.Tifrunner.gnm1.ann1.3J1SD9 Arachis hypogaea HOM05D007699 ORTHO05D009796 4.1e-15 84.7 50 72.0
FvH4_3g13700 Fragaria vesca HOM05D007699 ORTHO05D009796 4.1e-15 84.7 45 86.7
FAN13G3199 Fragaria x ananassa HOM05D007699 ORTHO05D009796 4.1e-15 84.7 77 58.4
FAN11G1327 Fragaria x ananassa HOM05D007699 ORTHO05D009796 5.4e-15 84.3 45 86.7
Medtr3g084270 Medicago truncatula HOM05D007699 ORTHO05D009796 5.4e-15 84.3 44 86.4
Prupe.7G069600 Prunus persica HOM05D007699 ORTHO05D009796 5.4e-15 84.3 38 97.4
C03p91420 Brassica napus HOM05D007699 ORTHO05D009796 7.1e-15 84.0 41 90.2
Sopen12g028800 Solanum pennellii HOM05D007699 ORTHO05D009796 9.2e-15 83.6 38 97.4
FAN11G3494 Fragaria x ananassa HOM05D007699 ORTHO05D009796 1.2e-14 83.2 45 86.7
Nitab4.5_0005352g0040 Nicotiana tabacum HOM05D007699 ORTHO05D009796 1.6e-14 82.8 51 76.5
EL10Ac6g13624 Beta vulgaris HOM05D007699 ORTHO05D009796 2.1e-14 82.4 45 80.0
CARHR185520 Cardamine hirsuta HOM05D007699 ORTHO05D009796 2.1e-14 82.4 40 92.5
Prupe.7G080000 Prunus persica HOM05D007699 ORTHO05D009796 2.1e-14 82.4 77 57.1
Carub.0003s1340 Capsella rubella HOM05D007699 ORTHO05D009796 2.7e-14 82.0 41 87.8
Gohir.D06G068332 Gossypium hirsutum HOM05D007699 ORTHO05D009796 2.7e-14 82.0 49 79.6
TPR.G32688 Trifolium pratense HOM05D007699 ORTHO05D009796 2.7e-14 82.0 55 76.4
FAN08G2016 Fragaria x ananassa HOM05D007699 ORTHO05D009796 3.5e-14 81.6 43 88.4
Manes.11G145650 Manihot esculenta HOM05D007699 ORTHO05D009796 6.0e-14 80.9 44 84.1
Mapoly0020s0143 Marchantia polymorpha HOM05D007699 ORTHO05D009796 6.0e-14 80.9 48 77.1
Phvul.001G066700 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 6.0e-14 80.9 41 85.4
arahy.Tifrunner.gnm1.ann1.3C01L3 Arachis hypogaea HOM05D007699 ORTHO05D009796 7.8e-14 80.5 36 97.2
CARHR088640 Cardamine hirsuta HOM05D007699 ORTHO05D009796 7.8e-14 80.5 41 90.2
FAN08G0324 Fragaria x ananassa HOM05D007699 ORTHO05D009796 7.8e-14 80.5 36 97.2
Mapoly0086s0020 Marchantia polymorpha HOM05D007699 ORTHO05D009796 7.8e-14 80.5 36 97.2
QL03p053410 Quercus lobata HOM05D007699 ORTHO05D009796 7.8e-14 80.5 36 97.2
Migut.J00839 Erythranthe guttata HOM05D007699 ORTHO05D009796 1.0e-13 80.1 41 87.8
Phvul.001G066900 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.3e-13 79.7 35 100.0
Pp3c15_10810 Physcomitrium patens HOM05D007699 ORTHO05D009796 3.0e-13 78.6 52 69.2
Pp3c15_10813 Physcomitrium patens HOM05D007699 ORTHO05D009796 3.0e-13 78.6 52 69.2
Pp3c15_10820 Physcomitrium patens HOM05D007699 ORTHO05D009796 3.0e-13 78.6 52 69.2
Solyc12g056290.2 Solanum lycopersicum HOM05D007699 ORTHO05D009796 3.0e-13 78.6 36 97.2
EL10Ac6g13683 Beta vulgaris HOM05D007699 ORTHO05D009796 3.9e-13 78.2 44 77.3
Ah.10g036850 Amaranthus hybridus HOM05D007699 ORTHO05D009796 8.6e-13 77.0 43 81.4
Nn7g36904 Nelumbo nucifera HOM05D007699 ORTHO05D009796 1.1e-12 76.6 50 74.0
Gorai.010G079800 Gossypium raimondii HOM05D007699 ORTHO05D009796 1.5e-12 76.3 49 75.5
GSVIVG01037330001 Vitis vinifera HOM05D007699 ORTHO05D009796 2.5e-12 75.5 38 86.8
Pp3s677_20 Physcomitrium patens HOM05D007699 ORTHO05D009796 4.3e-12 74.7 65 60.0
EL10Ac6g13623 Beta vulgaris HOM05D007699 ORTHO05D009796 5.6e-12 74.3 35 94.3
CSS0021910 Camellia sinensis var. sinensis HOM05D007699 ORTHO05D009796 5.6e-12 74.3 46 73.9
Pp3c1_6540 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.6e-12 74.3 37 89.2
EL10Ac6g13685 Beta vulgaris HOM05D007699 ORTHO05D009796 9.6e-12 73.6 35 94.3
Ciclev10018283m.g Citrus clementina HOM05D007699 ORTHO05D009796 9.6e-12 73.6 35 94.3
Pp3c10_15080 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.2e-11 73.2 62 61.3
Pp3c10_15084 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.2e-11 73.2 62 61.3
Pp3s1006_30 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.2e-11 73.2 62 61.3
Pp3s638_22 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.2e-11 73.2 62 61.3
Pp3s677_10 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.2e-11 73.2 62 61.3
Pp3s677_11 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.2e-11 73.2 62 61.3
Thecc.10G037500 Theobroma cacao HOM05D007699 ORTHO05D009796 1.2e-11 73.2 35 91.4
Carub.0006s3371 Capsella rubella HOM05D007699 ORTHO05D009796 2.1e-11 72.4 36 88.9
Gorai.011G262200 Gossypium raimondii HOM05D007699 ORTHO05D009796 2.8e-11 72.0 32 100.0
Potri.005G055534 Populus trichocarpa HOM05D007699 ORTHO05D009796 2.8e-11 72.0 32 100.0
EL10Ac6g13684 Beta vulgaris HOM05D007699 ORTHO05D009796 3.6e-11 71.6 34 94.1
Phvul.001G090500 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 3.6e-11 71.6 36 91.7
Potri.005G055667 Populus trichocarpa HOM05D007699 ORTHO05D009796 3.6e-11 71.6 32 96.9
Medtr8g461450 Medicago truncatula HOM05D007699 ORTHO05D009796 4.7e-11 71.2 32 96.9
Pp3c24_6960 Physcomitrium patens HOM05D007699 ORTHO05D009796 6.2e-11 70.9 39 79.5
Pp3c24_6961 Physcomitrium patens HOM05D007699 ORTHO05D009796 6.2e-11 70.9 44 70.5
Glyma.19G099100 Glycine max HOM05D007699 ORTHO05D009796 8.1e-11 70.5 40 80.0
FAN11G3758 Fragaria x ananassa HOM05D007699 ORTHO05D009796 1.4e-10 69.7 32 96.9
Gohir.A11G277350 Gossypium hirsutum HOM05D007699 ORTHO05D009796 1.4e-10 69.7 40 80.0
SHI29091 Sapria himalayana HOM05D007699 ORTHO05D009796 1.4e-10 69.7 33 93.9
Pp3c21_2000 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.8e-10 69.3 40 80.0
Pp3c21_2022 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.8e-10 69.3 40 80.0
EL10Ac6g13625 Beta vulgaris HOM05D007699 ORTHO05D009796 2.4e-10 68.9 48 72.9
Medtr3g108610 Medicago truncatula HOM05D007699 ORTHO05D009796 2.4e-10 68.9 32 93.8
Phvul.009G076400 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 3.1e-10 68.6 31 96.8
CSS0023756 Camellia sinensis var. sinensis HOM05D007699 ORTHO05D009796 4.0e-10 68.2 30 100.0
FAN18G1871 Fragaria x ananassa HOM05D007699 ORTHO05D009796 4.0e-10 68.2 30 100.0
Gorai.011G262800 Gossypium raimondii HOM05D007699 ORTHO05D009796 4.0e-10 68.2 30 100.0
PGSC0003DMG400029597 Solanum tuberosum HOM05D000312 ORTHO05D000221 4.0e-10 68.2 30 100.0
Pp3c1_26810 Physcomitrium patens HOM05D007699 ORTHO05D009796 6.8e-10 67.4 31 96.8
Pp3c1_26830 Physcomitrium patens HOM05D007699 ORTHO05D009796 6.8e-10 67.4 31 96.8
arahy.Tifrunner.gnm1.ann1.C3EWW9 Arachis hypogaea HOM05D007699 ORTHO05D009796 1.2e-09 66.6 31 93.5
EL10Ac6g13621 Beta vulgaris HOM05D007699 ORTHO05D009796 2.0e-09 65.9 53 58.5
Pp3c24_16090 Physcomitrium patens HOM05D007699 ORTHO05D009796 9.9e-09 63.5 60 53.3
Pp3c24_16091 Physcomitrium patens HOM05D007699 ORTHO05D009796 9.9e-09 63.5 60 53.3
Medtr2g101670 Medicago truncatula HOM05D007699 ORTHO05D009796 2.9e-08 62.0 33 81.8
Medtr6g070990 Medicago truncatula HOM05D007699 ORTHO05D009796 5.4e-07 57.8 26 96.2
Pp3c27_1930 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.2e-06 56.6 38 65.8
SHI28974 Sapria himalayana HOM05D007699 ORTHO05D009796 1.2e-06 56.6 36 72.2
AT2G15530 Arabidopsis thaliana HOM05D000187 ORTHO05D000230 4.6e-06 54.7 36 72.2


User provided reference genes

Program Settings