Gene: AT2G15530

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G15530
  • Transcript Identifier AT2G15530.4
  • Gene Type Coding gene
  • Location Chr2 : 6774150-6777899 : positive

Gene Family Information

  • ID HOM05D000187
  • #Genes/#Species 2054/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G15530.4
  • symbol MBR1
  • full_name MED25 BINDING RING-H2 PROTEIN 1
  • uniprot Q9ZQF9

Descriptions

  • Description RING/U-box superfamily protein
  • Computational description RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1); Has 9020 Blast hits to 8257 proteins in 301 species: Archae - 0; Bacteria - 55; Metazoa - 2556; Fungi - 687; Plants - 3907; Viruses - 28; Other Eukaryotes - 1787 (source: NCBI BLink).
  • Computational description RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
Gene Ontologyprotein ubiquitination
GO:0010228
IGI
Gene Ontologyvegetative to reproductive phase transition of meristem1
GO:0043161
IDA
Gene Ontologyproteasome-mediated ubiquitin-dependent protein catabolic process1
GO:0009908
IEA
GOA Databaseflower development

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0061630
IBA
Gene Ontologyubiquitin protein ligase activity2
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.3.3.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.CTL-subclass ligase