Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G12016 Trifolium pratense HOM05D004718 ORTHO05D005838 9.4e-62 240.0 117 100.0
Ca_12884_v3 Cicer arietinum L. HOM05D004718 ORTHO05D005838 1.5e-35 152.9 170 52.4
Medtr1g010040 Medicago truncatula HOM05D004718 ORTHO05D005838 6.3e-34 147.5 170 52.4
TPR.G21961 Trifolium pratense HOM05D004718 ORTHO05D005838 3.1e-33 145.2 81 87.7
Psat6g031760 Pisum sativum HOM05D004718 ORTHO05D005838 1.6e-32 142.9 171 50.3
Lalb_Chr08g0243651 Lupinus albus HOM05D004718 ORTHO05D005838 1.0e-31 140.2 162 51.2
VMungo1309G0968 Vigna mungo HOM05D004718 ORTHO05D005838 2.5e-30 135.6 170 47.1
Glyma.04G074300 Glycine max HOM05D004718 ORTHO05D005838 3.0e-28 128.6 170 45.9
Glyma.06G075500 Glycine max HOM05D004718 ORTHO05D005838 5.2e-28 127.9 170 45.3
Hma1.2p1_0147F.1_g065850 Hydrangea macrophylla HOM05D004718 ORTHO05D005838 8.9e-28 127.1 79 81.0
Lalb_Chr14g0362131 Lupinus albus HOM05D004718 ORTHO05D005838 1.2e-27 126.7 83 74.7
Lj5g0017014 Lotus japonicus HOM05D004718 ORTHO05D005838 2.6e-27 125.6 170 45.9
Glyma.14G132500 Glycine max HOM05D004718 ORTHO05D005838 3.4e-27 125.2 171 45.0
Glyma.17G201000 Glycine max HOM05D004718 ORTHO05D005838 3.4e-27 125.2 171 45.6
arahy.Tifrunner.gnm1.ann1.7TNR6F Arachis hypogaea HOM05D004718 ORTHO05D005838 5.8e-27 124.4 170 44.7
arahy.Tifrunner.gnm1.ann1.N8XBBJ Arachis hypogaea HOM05D004718 ORTHO05D005838 5.8e-27 124.4 170 44.7
Phvul.009G100000 Phaseolus vulgaris HOM05D004718 ORTHO05D005838 5.8e-27 124.4 170 43.5
CSS0012298 Camellia sinensis var. sinensis HOM05D004718 ORTHO05D005838 7.5e-27 124.0 75 78.7
CSS0022336 Camellia sinensis var. sinensis HOM05D004718 ORTHO05D005838 7.5e-27 124.0 75 78.7
Phvul.001G057700 Phaseolus vulgaris HOM05D004718 ORTHO05D005838 2.2e-26 122.5 171 44.4
vmacro12747 Vaccinium macrocarpon HOM05D004718 ORTHO05D005838 2.2e-26 122.5 79 78.5
Duzib168G2024 Durio zibethinus HOM05D004718 ORTHO05D005838 2.9e-26 122.1 75 80.0
TPR.G12432 Trifolium pratense HOM05D004718 ORTHO05D005838 3.7e-26 121.7 73 80.8
CANSAT25G2838 Cannabis sativa HOM05D004718 ORTHO05D005838 1.1e-25 120.2 83 68.7
Cpa.g.sc42.63 Carica papaya HOM05D004718 ORTHO05D005838 1.1e-25 120.2 87 67.8
Cc07_g17410 Coffea canephora HOM05D004718 ORTHO05D005838 1.1e-25 120.2 79 75.9
Gohir.D13G185401 Gossypium hirsutum HOM05D004718 ORTHO05D005838 1.1e-25 120.2 75 78.7
Medtr3g108660 Medicago truncatula HOM05D004718 ORTHO05D005838 1.1e-25 120.2 81 72.8
Solyc03g078390.3 Solanum lycopersicum HOM05D004718 ORTHO05D005838 1.1e-25 120.2 78 74.4
Sopen03g021200 Solanum pennellii HOM05D004718 ORTHO05D005838 1.1e-25 120.2 78 74.4
PGSC0003DMG401018450 Solanum tuberosum HOM05D004718 ORTHO05D005838 1.1e-25 120.2 78 74.4
Thecc.09G001900 Theobroma cacao HOM05D004718 ORTHO05D005838 1.1e-25 120.2 162 46.3
Psat5g025880 Pisum sativum HOM05D004718 ORTHO05D005838 1.4e-25 119.8 70 82.9
MD15G1110500 Malus domestica HOM05D004718 ORTHO05D005838 2.4e-25 119.0 79 74.7
Nitab4.5_0000004g0240 Nicotiana tabacum HOM05D004718 ORTHO05D005838 2.4e-25 119.0 79 73.4
Actinidia03322 Actinidia chinensis HOM05D004718 ORTHO05D005838 3.2e-25 118.6 73 79.5
Actinidia25724 Actinidia chinensis HOM05D004718 ORTHO05D005838 3.2e-25 118.6 73 79.5
Ca_15681_v3 Cicer arietinum L. HOM05D004718 ORTHO05D005838 3.2e-25 118.6 170 44.1
Gohir.A13G181900 Gossypium hirsutum HOM05D004718 ORTHO05D005838 3.2e-25 118.6 162 46.3
Gorai.013G211400 Gossypium raimondii HOM05D004718 ORTHO05D005838 3.2e-25 118.6 162 46.3
DCAR_000697 Daucus carota HOM05D004718 ORTHO05D005838 4.1e-25 118.2 79 74.7
Dinv09445 Davidia involucrata HOM05D004718 ORTHO05D005838 4.1e-25 118.2 75 74.7
Prupe.1G462800 Prunus persica HOM05D004718 ORTHO05D005838 4.1e-25 118.2 87 67.8
CARHR158620 Cardamine hirsuta HOM05D004718 ORTHO05D005838 5.4e-25 117.9 79 77.2
VMungo0647G1764 Vigna mungo HOM05D004718 ORTHO05D005838 5.4e-25 117.9 81 70.4
CAN.G30.25 Capsicum annuum HOM05D004718 ORTHO05D005838 7.0e-25 117.5 72 76.4
Ciclev10007306m.g Citrus clementina HOM05D004718 ORTHO05D005838 7.0e-25 117.5 73 78.1
Migut.H01115 Erythranthe guttata HOM05D004718 ORTHO05D005838 1.2e-24 116.7 79 73.4
MD08G1133600 Malus domestica HOM05D004718 ORTHO05D005838 1.2e-24 116.7 79 73.4
Rhsim04G0220700 Rhododendron simsii HOM05D004718 ORTHO05D005838 1.2e-24 116.7 79 74.7
EL10Ac2g03649 Beta vulgaris HOM05D004718 ORTHO05D005838 1.6e-24 116.3 73 76.7
RcHm_v2.0_Chr6g0312261 Rosa chinensis HOM05D004718 ORTHO05D005838 1.6e-24 116.3 87 67.8
Atru.chr12.843 Acer truncatum HOM05D004718 ORTHO05D005838 2.0e-24 115.9 162 45.1
Lj7A755G38 Lonicera japonica HOM05D004718 ORTHO05D005838 2.0e-24 115.9 79 77.2
Manes.18G079200 Manihot esculenta HOM05D004718 ORTHO05D005838 2.0e-24 115.9 75 77.3
Nitab4.5_0000964g0050 Nicotiana tabacum HOM05D004718 ORTHO05D005838 2.0e-24 115.9 79 72.2
TAR624G0199 Trochodendron aralioides HOM05D004718 ORTHO05D005838 2.0e-24 115.9 75 74.7
MSTRG.2684 Avicennia marina HOM05D004718 ORTHO05D005838 3.5e-24 115.2 90 68.9
COL.COLO4_18636 Corchorus olitorius HOM05D004718 ORTHO05D005838 3.5e-24 115.2 73 75.3
Haze_21689 Corylus avellana HOM05D004718 ORTHO05D005838 4.6e-24 114.8 170 44.1
Peaxi162Scf00583g00537 Petunia axillaris HOM05D004718 ORTHO05D005838 4.6e-24 114.8 79 72.2
FvH4_2g30650 Fragaria vesca HOM05D004718 ORTHO05D005838 7.8e-24 114.0 87 65.5
FAN20G1074 Fragaria x ananassa HOM05D003231 ORTHO05D005838 7.8e-24 114.0 87 65.5
FAN27G1892 Fragaria x ananassa HOM05D004718 ORTHO05D005838 7.8e-24 114.0 87 65.5
Eucgr.E04341 Eucalyptus grandis HOM05D004718 ORTHO05D005838 1.0e-23 113.6 75 74.7
Carub.0005s1593 Capsella rubella HOM05D004718 ORTHO05D005838 1.3e-23 113.2 79 74.7
AUR62028027 Chenopodium quinoa HOM05D004718 ORTHO05D005838 1.3e-23 113.2 73 76.7
Lsat_1_v5_gn_5_59280 Lactuca sativa HOM05D004718 ORTHO05D005838 1.3e-23 113.2 79 73.4
TWI32G0049 Tripterygium wilfordii HOM05D004718 ORTHO05D005838 1.3e-23 113.2 87 64.4
CiPaw.07G215000 Carya illinoinensis HOM05D004718 ORTHO05D005838 1.7e-23 112.8 83 67.5
Oeu047653.1 Olea europaea HOM05D004718 ORTHO05D005838 1.7e-23 112.8 79 70.9
SGA_v2.0_scaffold76G25169 Striga asiatica HOM05D004718 ORTHO05D005838 1.7e-23 112.8 73 75.3
AL5G29440 Arabidopsis lyrata HOM05D004718 ORTHO05D005838 3.0e-23 112.1 79 74.7
Hund19371 Selenicereus undatus HOM05D004718 ORTHO05D005838 3.0e-23 112.1 73 72.6
GSVIVG01035602001 Vitis vinifera HOM05D004718 ORTHO05D005838 3.0e-23 112.1 76 75.0
BcaB01g00691 Brassica carinata HOM05D004718 ORTHO05D005838 3.9e-23 111.7 79 74.7
Os03g0192800 Oryza sativa ssp. japonica HOM05D004718 ORTHO05D005838 3.9e-23 111.7 75 70.7
Sc06g0001390 Simmondsia chinensis HOM05D004718 ORTHO05D005838 3.9e-23 111.7 71 76.1
CsaV3_2G031540 Cucumis sativus L. HOM05D004718 ORTHO05D005838 5.0e-23 111.3 75 70.7
Ah.11g044230 Amaranthus hybridus HOM05D004718 ORTHO05D005838 6.6e-23 110.9 73 74.0
ClCG08G012790 Citrullus lanatus HOM05D004718 ORTHO05D005838 6.6e-23 110.9 75 69.3
Thhalv10010085m.g Eutrema salsugineum HOM05D004718 ORTHO05D005838 6.6e-23 110.9 79 74.7
Sp5g12510 Schrenkiella parvula HOM05D004718 ORTHO05D005838 6.6e-23 110.9 79 73.4
THA.LOC104799000 Tarenaya hassleriana HOM05D004718 ORTHO05D005838 6.6e-23 110.9 75 74.7
AT3G49600 Arabidopsis thaliana HOM05D004718 ORTHO05D005838 8.6e-23 110.5 79 73.4
MELO3C011203.2 Cucumis melo HOM05D004718 ORTHO05D005838 8.6e-23 110.5 75 70.7
AUR62020697 Chenopodium quinoa HOM05D004718 ORTHO05D005838 1.1e-22 110.2 73 74.0
MBI07_g41265_MAGBIO Magnolia biondii HOM05D004718 ORTHO05D005838 1.1e-22 110.2 75 73.3
BcaC07g39424 Brassica carinata HOM05D004718 ORTHO05D005838 1.9e-22 109.4 79 73.4
A06p18130 Brassica napus HOM05D004718 ORTHO05D005838 1.9e-22 109.4 79 73.4
C08p24600 Brassica napus HOM05D004718 ORTHO05D005838 1.9e-22 109.4 79 73.4
BolC8t50076H Brassica oleracea HOM05D004718 ORTHO05D005838 1.9e-22 109.4 79 73.4
BraA06t24901Z Brassica rapa HOM05D004718 ORTHO05D005838 1.9e-22 109.4 79 73.4
Aqoxy7G00911 Aquilegia oxysepala HOM05D004718 ORTHO05D005838 2.5e-22 109.0 86 66.3
QL12p024639 Quercus lobata HOM05D004718 ORTHO05D005838 3.3e-22 108.6 170 42.4
Sed0007031 Sechium edule HOM05D004718 ORTHO05D005838 3.3e-22 108.6 75 68.0
HPP92_023162 Vanilla planifolia HOM05D004718 ORTHO05D005838 3.3e-22 108.6 75 69.3
HanXRQChr03g0082331 Helianthus annuus HOM05D004718 ORTHO05D005838 4.3e-22 108.2 79 69.6
Potri.005G179500 Populus trichocarpa HOM05D004718 ORTHO05D005838 4.3e-22 108.2 73 68.5
Sed0011780 Sechium edule HOM05D004718 ORTHO05D005838 4.3e-22 108.2 75 70.7
Nn8g40158 Nelumbo nucifera HOM05D004718 ORTHO05D005838 9.5e-22 107.1 75 69.3
SEGI_37293 Sequoiadendron giganteum HOM05D004718 ORTHO05D005838 9.5e-22 107.1 87 59.8
A06p28290 Brassica napus HOM05D004718 ORTHO05D005838 1.2e-21 106.7 90 64.4
BraA06t25772Z Brassica rapa HOM05D004718 ORTHO05D005838 1.2e-21 106.7 90 64.4
ECA240G2491 Erigeron canadensis HOM05D004718 ORTHO05D005838 1.2e-21 106.7 79 68.4
PSO421G0298 Papaver somniferum HOM05D004718 ORTHO05D005838 2.1e-21 105.9 81 61.7
Potri.002G081600 Populus trichocarpa HOM05D004718 ORTHO05D005838 2.8e-21 105.5 73 68.5
Zm00001eb310400 Zea mays HOM05D004718 ORTHO05D005838 2.8e-21 105.5 72 70.8
CDE04G3074 Ceratophyllum demersum HOM05D004718 ORTHO05D005838 8.0e-21 104.0 72 68.1
PSO063G2513 Papaver somniferum HOM05D004718 ORTHO05D005838 1.4e-20 103.2 81 61.7
PGR142G1098 Punica granatum HOM05D004718 ORTHO05D005838 1.4e-20 103.2 73 64.4
Zm00001eb008340 Zea mays HOM05D004718 ORTHO05D005838 2.3e-20 102.4 75 65.3
CDE06G1884 Ceratophyllum demersum HOM05D004718 ORTHO05D005838 3.1e-20 102.1 72 68.1
Sabra02G0063900 Salix brachista HOM05D004718 ORTHO05D005838 5.2e-20 101.3 73 64.4
Mapoly0015s0043 Marchantia polymorpha HOM05D004718 ORTHO05D005838 4.4e-19 98.2 80 52.5
PSO017G4020 Papaver somniferum HOM05D004718 ORTHO05D005838 4.4e-19 98.2 76 64.5
ATR0006G074 Amborella trichopoda HOM05D004718 ORTHO05D005838 1.7e-18 96.3 87 57.5
SMO367G0705 Selaginella moellendorffii HOM05D004718 ORTHO05D005838 4.9e-18 94.7 84 54.8
BcaB02g09597 Brassica carinata HOM05D004718 ORTHO05D005838 9.2e-17 90.5 54 79.6
Pp3c16_5610 Physcomitrium patens HOM05D004718 ORTHO05D005838 1.6e-16 89.7 75 54.7
CBR_g19585 Chara braunii HOM05D004718 ORTHO05D005838 7.8e-16 87.4 74 55.4
Cre01.g030450 Chlamydomonas reinhardtii HOM05D004718 ORTHO05D005838 3.5e-08 62.0 83 38.6
PRCOL_00003856 Prasinoderma coloniale HOM05D004718 ORTHO05D005838 5.6e-06 54.7 68 39.7


User provided reference genes

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