Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10921 Trifolium pratense HOM05D002270 ORTHO05D002866 8.4e-239 830.1 464 100.0
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 1.8e-193 679.5 467 82.0
TPR.G9775 Trifolium pratense HOM05D002270 ORTHO05D002866 2.7e-192 675.6 385 95.6
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 5.2e-180 634.8 464 79.3
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 4.3e-158 562.0 463 71.3
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 4.1e-153 545.4 467 67.7
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 1.4e-145 520.4 464 64.7
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 2.4e-132 476.5 453 66.7
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 1.6e-128 463.8 466 59.9
VMungo0464G0658 Vigna mungo HOM05D002270 ORTHO05D002866 4.8e-125 452.2 451 60.5
arahy.Tifrunner.gnm1.ann1.3D1K9T Arachis hypogaea HOM05D002270 ORTHO05D002866 2.6e-123 446.4 469 59.1
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 1.3e-119 434.1 469 57.8
Lalb_Chr20g0113911 Lupinus albus HOM05D002270 ORTHO05D002866 8.2e-109 398.3 467 54.8
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 6.7e-87 325.5 451 48.3
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 1.2e-83 314.7 458 46.1
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 6.8e-79 298.9 458 45.9
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 2.6e-78 297.0 476 44.3
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 2.7e-75 287.0 458 44.8
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 1.7e-74 284.3 460 43.9
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 2.2e-74 283.9 466 43.3
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 2.2e-74 283.9 455 43.3
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 5.0e-74 282.7 464 42.7
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 2.5e-73 280.4 465 42.8
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 6.1e-72 275.8 475 42.9
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 2.8e-69 266.9 473 42.1
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 6.3e-69 265.8 470 41.5
QL03p018747 Quercus lobata HOM05D002270 ORTHO05D002866 5.9e-67 259.2 464 40.9
TAR636G2809 Trochodendron aralioides HOM05D002270 ORTHO05D002866 7.7e-67 258.8 455 41.8
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 4.3e-65 253.1 494 40.7
vmacro22216 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 1.2e-64 251.5 469 42.2
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 6.1e-64 249.2 460 41.5
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 7.5e-62 242.3 451 42.4
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 2.2e-61 240.7 446 40.6
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 3.7e-61 240.0 461 40.8
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 3.7e-61 240.0 454 41.0
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 6.4e-61 239.2 461 40.6
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 5.9e-59 232.6 469 39.9
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 3.6e-56 223.4 469 38.8
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 1.8e-55 221.1 480 37.5
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 4.0e-55 219.9 450 39.6
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 5.8e-54 216.1 446 38.6
Oeu039944.3 Olea europaea HOM05D002270 ORTHO05D002866 7.5e-54 215.7 462 38.5
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 7.5e-54 215.7 464 40.7
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 2.9e-53 213.8 443 40.9
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 3.7e-53 213.4 470 38.9
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 7.0e-52 209.1 455 39.1
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 7.8e-51 205.7 468 38.2
Hund05750 Selenicereus undatus HOM05D002270 ORTHO05D002866 2.3e-50 204.1 474 36.9
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 3.9e-50 203.4 452 38.5
Nitab4.5_0000433g0200 Nicotiana tabacum HOM05D002270 ORTHO05D002866 3.3e-49 200.3 456 38.4
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 9.5e-49 198.7 478 36.8
Eucgr.J02836 Eucalyptus grandis HOM05D002270 ORTHO05D002866 1.2e-48 198.4 488 35.9
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 1.1e-47 195.3 457 39.4
Sc15g0000370 Simmondsia chinensis HOM05D002270 ORTHO05D002866 1.8e-47 194.5 461 35.6
Peaxi162Scf00226g00823 Petunia axillaris HOM05D002270 ORTHO05D002866 4.0e-47 193.4 470 40.2
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 6.8e-47 192.6 461 36.7
Nitab4.5_0003025g0020 Nicotiana tabacum HOM05D002270 ORTHO05D002866 8.9e-47 192.2 467 38.5
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 3.7e-45 186.8 451 37.0
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 1.1e-44 185.3 461 37.3
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 2.4e-44 184.1 456 37.9
Cpa.g.sc1872.2 Carica papaya HOM05D002270 ORTHO05D002866 9.2e-44 182.2 196 54.6
ECA232G3855 Erigeron canadensis HOM05D002270 ORTHO05D002866 6.0e-43 179.5 458 38.4
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 1.7e-42 177.9 459 36.2
Solyc04g072260.3 Solanum lycopersicum HOM05D002270 ORTHO05D002866 1.1e-41 175.3 455 38.0
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 4.3e-41 173.3 465 34.4
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 4.3e-41 173.3 456 36.2
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 5.6e-41 172.9 455 35.2
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 6.4e-37 159.5 472 35.2
MBI17_g19031_MAGBIO Magnolia biondii HOM05D002270 ORTHO05D002866 8.4e-37 159.1 449 34.5
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 2.4e-36 157.5 453 35.3
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 2.1e-35 154.5 455 35.8
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 2.7e-35 154.1 459 34.4
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 6.0e-35 152.9 460 33.3
Sp5g22050 Schrenkiella parvula HOM05D002270 ORTHO05D002866 5.6e-33 146.4 455 33.6
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 9.6e-33 145.6 472 32.2
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 1.6e-32 144.8 462 33.8
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 1.4e-31 141.7 448 32.6
COL.COLO4_12565 Corchorus olitorius HOM05D002270 ORTHO05D002866 5.2e-31 139.8 185 47.6
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 6.9e-31 139.4 458 32.8
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 8.9e-31 139.0 471 32.1
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 1.3e-29 135.2 458 32.5
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 1.4e-28 131.7 467 33.8
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 9.3e-28 129.0 460 31.5
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 1.2e-27 128.6 470 31.5
FAN09G1018 Fragaria x ananassa HOM05D002270 ORTHO05D002866 2.1e-27 127.9 354 36.7
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 7.8e-27 125.9 453 31.8
ATR0736G011 Amborella trichopoda HOM05D002270 ORTHO05D002866 1.0e-26 125.6 454 30.0
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 1.5e-25 121.7 457 32.4
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 1.9e-25 121.3 452 32.1
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 4.3e-25 120.2 463 30.5
Ah.08g216550 Amaranthus hybridus HOM05D002270 ORTHO05D002866 9.6e-25 119.0 466 29.8
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 6.9e-23 112.8 466 30.7
CDE12G0087 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 2.6e-22 110.9 399 34.6
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 1.7e-21 108.2 459 30.5
BolC2t08403H Brassica oleracea HOM05D002270 ORTHO05D002866 2.2e-21 107.8 454 31.5
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 6.4e-21 106.3 467 29.8
SEGI_39597 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 8.4e-21 105.9 196 40.8
Hma1.2p1_0291F.1_g115290 Hydrangea macrophylla HOM05D002270 ORTHO05D002866 1.2e-19 102.1 197 36.0
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 1.6e-19 101.7 479 30.7
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 1.6e-19 101.7 474 29.7
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 7.9e-19 99.4 470 31.3
Aqoxy6G02933 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 6.7e-18 96.3 170 41.8
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 2.5e-17 94.4 457 29.8
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 2.5e-17 94.4 457 29.8
SEGI_24649 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 7.4e-17 92.8 493 28.4
ECA067G0003 Erigeron canadensis HOM05D002270 ORTHO05D002866 1.3e-16 92.0 104 57.7
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 3.6e-16 90.5 454 29.1
PSO210G4815 Papaver somniferum HOM05D002270 ORTHO05D002866 3.1e-15 87.4 355 29.3
Aqoxy6G02934 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 1.9e-12 78.2 96 49.0
AagrBONN_evm.TU.Sc2ySwM_344.4174 Anthoceros agrestis HOM05D002270 ORTHO05D002866 5.1e-10 70.1 483 26.7
PGSC0003DMG400044228 Solanum tuberosum HOM05D002270 ORTHO05D002866 1.1e-09 68.9 249 31.7
PGSC0003DMG400021645 Solanum tuberosum HOM05D002270 ORTHO05D002866 9.6e-09 65.9 241 32.0
PRCOL_00003697 Prasinoderma coloniale HOM05D002270 ORTHO05D002866 1.6e-08 65.1 141 35.5
BcaC05g27863 Brassica carinata HOM05D002270 ORTHO05D002866 2.0e-06 58.2 388 29.4
Glyma.06G237366 Glycine max HOM05D002270 ORTHO05D002866 5.8e-06 56.6 42 71.4


User provided reference genes

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