Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10834 Trifolium pratense HOM05D004762 ORTHO05D005972 3.7e-51 204.5 100 100.0
Ca_23540_v3 Cicer arietinum L. HOM05D004762 ORTHO05D005972 5.2e-45 184.1 100 90.0
Medtr8g027750 Medicago truncatula HOM05D004762 ORTHO05D005972 2.0e-44 182.2 100 89.0
Psat4g160680 Pisum sativum HOM05D004762 ORTHO05D005972 8.3e-43 176.8 94 87.2
Lj3g0010190 Lotus japonicus HOM05D004762 ORTHO05D005972 1.5e-36 156.0 94 75.5
Glyma.07G056300 Glycine max HOM05D004762 ORTHO05D005972 1.7e-35 152.5 94 77.7
Glyma.16G025200 Glycine max HOM05D004762 ORTHO05D005972 2.9e-35 151.8 98 75.5
CANSAT56G2662 Cannabis sativa HOM05D004762 ORTHO05D005972 8.4e-35 150.2 97 71.1
Lalb_Chr04g0254441 Lupinus albus HOM05D004762 ORTHO05D005972 8.4e-35 150.2 89 74.2
Phvul.010G113600 Phaseolus vulgaris HOM05D004762 ORTHO05D005972 8.4e-35 150.2 88 76.1
CsaV3_5G010300 Cucumis sativus L. HOM05D004762 ORTHO05D005972 1.1e-34 149.8 89 73.0
Phvul.010G113266 Phaseolus vulgaris HOM05D004762 ORTHO05D005972 1.9e-34 149.1 88 75.0
VMungo0331G1989 Vigna mungo HOM05D004762 ORTHO05D005972 2.4e-34 148.7 88 75.0
CiPaw.01G300200 Carya illinoinensis HOM05D004762 ORTHO05D005972 5.4e-34 147.5 89 76.4
ClCG07G004360 Citrullus lanatus HOM05D004762 ORTHO05D005972 3.5e-33 144.8 89 73.0
SalBow6G6782 Salvia bowleyana HOM05D004762 ORTHO05D005972 3.5e-33 144.8 90 71.1
Nitab4.5_0000797g0010 Nicotiana tabacum HOM05D004762 ORTHO05D005972 4.6e-33 144.4 93 68.8
Sed0015827 Sechium edule HOM05D004762 ORTHO05D005972 4.6e-33 144.4 89 71.9
Oeu011273.2 Olea europaea HOM05D004762 ORTHO05D005972 6.0e-33 144.1 89 73.0
arahy.Tifrunner.gnm1.ann1.BGVI4S Arachis hypogaea HOM05D004762 ORTHO05D005972 7.8e-33 143.7 85 77.6
AL108U10020 Arabidopsis lyrata HOM05D004762 ORTHO05D005972 1.0e-32 143.3 98 68.4
AL4G37920 Arabidopsis lyrata HOM05D004762 ORTHO05D005972 1.0e-32 143.3 98 68.4
MELO3C018365.2 Cucumis melo HOM05D004762 ORTHO05D005972 1.0e-32 143.3 100 67.0
Sopen10g028440 Solanum pennellii HOM05D004762 ORTHO05D005972 1.0e-32 143.3 89 73.0
AT2G40190 Arabidopsis thaliana HOM05D004762 ORTHO05D005972 1.3e-32 142.9 98 68.4
arahy.Tifrunner.gnm1.ann1.YY9F0M Arachis hypogaea HOM05D004762 ORTHO05D005972 1.3e-32 142.9 101 70.3
Dinv21748 Davidia involucrata HOM05D004762 ORTHO05D005972 1.3e-32 142.9 95 68.4
BcaC02g12138 Brassica carinata HOM05D004762 ORTHO05D005972 1.7e-32 142.5 98 68.4
C04p07190 Brassica napus HOM05D004762 ORTHO05D005972 1.7e-32 142.5 89 70.8
BolC4t22343H Brassica oleracea HOM05D004762 ORTHO05D005972 1.7e-32 142.5 89 70.8
arahy.Tifrunner.gnm1.ann1.NBD53L Arachis hypogaea HOM05D004762 ORTHO05D005972 2.3e-32 142.1 85 76.5
Peaxi162Scf00284g00722 Petunia axillaris HOM05D004762 ORTHO05D005972 2.3e-32 142.1 94 67.0
Rhsim03G0145100 Rhododendron simsii HOM05D004762 ORTHO05D005972 2.3e-32 142.1 99 70.7
Lsat_1_v5_gn_2_124101 Lactuca sativa HOM05D004762 ORTHO05D005972 3.0e-32 141.7 100 68.0
PGSC0003DMG400019183 Solanum tuberosum HOM05D004762 ORTHO05D005972 3.0e-32 141.7 99 69.7
Lj8A64T49 Lonicera japonica HOM05D004762 ORTHO05D005972 3.9e-32 141.4 99 69.7
TAR636G3670 Trochodendron aralioides HOM05D004762 ORTHO05D005972 3.9e-32 141.4 87 70.1
Aa31LG5G19380 Aethionema arabicum HOM05D004762 ORTHO05D005972 5.1e-32 141.0 89 71.9
A05p06240 Brassica napus HOM05D004762 ORTHO05D005972 5.1e-32 141.0 98 68.4
Ciclev10031450m.g Citrus clementina HOM05D004762 ORTHO05D005972 5.1e-32 141.0 97 69.1
Hma1.2p1_0523F.1_g172170 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 5.1e-32 141.0 85 74.1
Nitab4.5_0013304g0010 Nicotiana tabacum HOM05D004762 ORTHO05D005972 5.1e-32 141.0 100 66.0
Oeu043882.1 Olea europaea HOM05D004762 ORTHO05D005972 5.1e-32 141.0 89 70.8
Prupe.2G252400 Prunus persica HOM05D004762 ORTHO05D005972 5.1e-32 141.0 89 70.8
QL06p052059 Quercus lobata HOM05D004762 ORTHO05D005972 5.1e-32 141.0 100 70.0
Sabra15G0114600 Salix brachista HOM05D004762 ORTHO05D005972 6.6e-32 140.6 99 65.7
AUR62012271 Chenopodium quinoa HOM05D004762 ORTHO05D005972 8.7e-32 140.2 94 67.0
Cpa.g.sc1441.3 Carica papaya HOM05D004762 ORTHO05D005972 1.1e-31 139.8 97 68.0
PSO017G2836 Papaver somniferum HOM05D004762 ORTHO05D005972 1.1e-31 139.8 87 70.1
PSO017G5956 Papaver somniferum HOM05D004762 ORTHO05D005972 1.1e-31 139.8 87 70.1
PSO675G7276 Papaver somniferum HOM05D004762 ORTHO05D005972 1.1e-31 139.8 98 66.3
Solyc10g076800.2 Solanum lycopersicum HOM05D004762 ORTHO05D005972 1.1e-31 139.8 99 68.7
CSS0039953 Camellia sinensis var. sinensis HOM05D004762 ORTHO05D005972 1.5e-31 139.4 91 71.4
CSS0044129 Camellia sinensis var. sinensis HOM05D004762 ORTHO05D005972 1.5e-31 139.4 91 71.4
CAN.G1087.1 Capsicum annuum HOM05D004762 ORTHO05D005972 1.5e-31 139.4 99 65.7
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 1.5e-31 139.4 91 73.6
Migut.F00664 Erythranthe guttata HOM05D004762 ORTHO05D005972 1.5e-31 139.4 95 66.3
Hma1.2p1_0145F.1_g065350 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 1.5e-31 139.4 85 72.9
Manes.07G131500 Manihot esculenta HOM05D004762 ORTHO05D005972 1.5e-31 139.4 88 72.7
Carub.0004s2241 Capsella rubella HOM05D004762 ORTHO05D005972 1.9e-31 139.0 98 66.3
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 1.9e-31 139.0 95 65.3
Potri.012G095500 Populus trichocarpa HOM05D004762 ORTHO05D005972 1.9e-31 139.0 100 65.0
BraA05t19588Z Brassica rapa HOM05D004762 ORTHO05D005972 2.5e-31 138.7 98 67.3
FvH4_7g24680 Fragaria vesca HOM05D004762 ORTHO05D005972 2.5e-31 138.7 95 65.3
FAN01G2296 Fragaria x ananassa HOM05D004762 ORTHO05D005972 2.5e-31 138.7 95 65.3
FAN06G2944 Fragaria x ananassa HOM05D004762 ORTHO05D005972 2.5e-31 138.7 95 65.3
HanXRQChr14g0459541 Helianthus annuus HOM05D004762 ORTHO05D005972 2.5e-31 138.7 73 79.5
vmacro06958 Vaccinium macrocarpon HOM05D004762 ORTHO05D005972 2.5e-31 138.7 99 71.7
Nn1g09364 Nelumbo nucifera HOM05D004762 ORTHO05D005972 3.3e-31 138.3 74 81.1
RcHm_v2.0_Chr1g0370541 Rosa chinensis HOM05D004762 ORTHO05D005972 3.3e-31 138.3 89 66.3
Aqoxy7G00585 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 4.3e-31 137.9 75 77.3
Thhalv10016619m.g Eutrema salsugineum HOM05D004762 ORTHO05D005972 4.3e-31 137.9 98 67.3
FAN10G2322 Fragaria x ananassa HOM05D004762 ORTHO05D005972 4.3e-31 137.9 95 64.2
Nitab4.5_0001180g0090 Nicotiana tabacum HOM05D004762 ORTHO05D005972 4.3e-31 137.9 93 65.6
PSO017G1441 Papaver somniferum HOM05D004762 ORTHO05D005972 4.3e-31 137.9 88 68.2
SGA_v2.0_scaffold44G16679 Striga asiatica HOM05D004762 ORTHO05D005972 4.3e-31 137.9 95 63.2
Sp4g22540 Schrenkiella parvula HOM05D004762 ORTHO05D005972 5.6e-31 137.5 98 66.3
MD07G1223900 Malus domestica HOM05D004762 ORTHO05D005972 7.3e-31 137.1 89 68.5
CAN.G1305.22 Capsicum annuum HOM05D004762 ORTHO05D005972 9.6e-31 136.7 99 62.6
EL10Ac2g04854 Beta vulgaris HOM05D004762 ORTHO05D005972 1.3e-30 136.3 100 66.0
MD01G1154800 Malus domestica HOM05D004762 ORTHO05D005972 1.3e-30 136.3 89 68.5
Actinidia33916 Actinidia chinensis HOM05D004762 ORTHO05D005972 2.1e-30 135.6 100 67.0
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 4.8e-30 134.4 89 69.7
DCAR_007786 Daucus carota HOM05D004762 ORTHO05D005972 4.8e-30 134.4 102 64.7
TWI53G2041 Tripterygium wilfordii HOM05D004762 ORTHO05D005972 4.8e-30 134.4 88 71.6
PSO478G3676 Papaver somniferum HOM05D004762 ORTHO05D005972 6.2e-30 134.0 98 64.3
CARHR135230 Cardamine hirsuta HOM05D004762 ORTHO05D005972 8.1e-30 133.7 98 64.3
Gorai.013G017200 Gossypium raimondii HOM05D004762 ORTHO05D005972 8.1e-30 133.7 89 68.5
Cfa001301 Carpinus fangiana HOM05D004762 ORTHO05D005972 1.1e-29 133.3 91 70.3
Eucgr.G03076 Eucalyptus grandis HOM05D004762 ORTHO05D005972 1.1e-29 133.3 90 66.7
PGR142G3177 Punica granatum HOM05D004762 ORTHO05D005972 1.1e-29 133.3 90 65.6
Gohir.D13G015700 Gossypium hirsutum HOM05D004762 ORTHO05D005972 1.4e-29 132.9 89 68.5
Thecc.10G014000 Theobroma cacao HOM05D004762 ORTHO05D005972 1.4e-29 132.9 89 67.4
SGA_v2.0_scaffold60G20982 Striga asiatica HOM05D004762 ORTHO05D005972 1.8e-29 132.5 89 62.9
COL.COLO4_23625 Corchorus olitorius HOM05D004762 ORTHO05D005972 2.4e-29 132.1 100 63.0
Duzib106G1587 Durio zibethinus HOM05D004762 ORTHO05D005972 3.1e-29 131.7 101 63.4
GSVIVG01032791001 Vitis vinifera HOM05D004762 ORTHO05D005972 4.0e-29 131.3 87 65.5
BcaB02g09041 Brassica carinata HOM05D004762 ORTHO05D005972 5.3e-29 131.0 80 71.2
Atru.BG.273.p Acer truncatum HOM05D004762 ORTHO05D005972 6.9e-29 130.6 66 86.4
TWI09G1175 Tripterygium wilfordii HOM05D004762 ORTHO05D005972 6.9e-29 130.6 90 70.0
unitig_748.g8448 Utricularia gibba HOM05D004762 ORTHO05D005972 9.0e-29 130.2 97 60.8
Gohir.A13G014500 Gossypium hirsutum HOM05D004762 ORTHO05D005972 2.0e-28 129.0 89 67.4
Sc10g0002460 Simmondsia chinensis HOM05D004762 ORTHO05D005972 2.0e-28 129.0 89 62.9
ATR0580G181 Amborella trichopoda HOM05D004762 ORTHO05D005972 5.8e-28 127.5 101 63.4
ECA238G4598 Erigeron canadensis HOM05D001399 ORTHO05D001670 9.9e-28 126.7 65 80.0
CDE02G4330 Ceratophyllum demersum HOM05D004762 ORTHO05D005972 1.3e-27 126.3 99 64.6
Hma1.2p1_0812F.1_g222370 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 6.4e-27 124.0 96 62.5
Hund15913 Selenicereus undatus HOM05D004762 ORTHO05D005972 8.4e-27 123.6 82 64.6
Cc08_g07190 Coffea canephora HOM05D004762 ORTHO05D005972 1.9e-26 122.5 100 61.0
DCAR_024818 Daucus carota HOM05D004762 ORTHO05D005972 5.4e-26 120.9 96 58.3
Zm00001eb030250 Zea mays HOM05D004762 ORTHO05D005972 1.3e-24 116.3 99 57.6
HPP92_020134 Vanilla planifolia HOM05D004762 ORTHO05D005972 2.1e-22 109.0 64 73.4
SMO358G0322 Selaginella moellendorffii HOM05D004762 ORTHO05D005972 1.1e-21 106.7 68 69.1
AagrBONN_evm.TU.Sc2ySwM_228.3247 Anthoceros agrestis HOM05D004762 ORTHO05D005972 1.8e-21 105.9 72 68.1
Pp3c14_26870 Physcomitrium patens HOM05D004762 ORTHO05D005972 1.2e-20 103.2 97 53.6
CBR_g12682 Chara braunii HOM05D004762 ORTHO05D005972 2.2e-19 99.0 76 60.5
MCO10G125 Micromonas commoda HOM05D004762 ORTHO05D005972 4.2e-18 94.7 65 63.1
Mapoly0096s0017 Marchantia polymorpha HOM05D004762 ORTHO05D005972 1.2e-17 93.2 99 48.5
Aqoxy4G02491 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 2.1e-14 82.4 88 48.9
PRCOL_00001728 Prasinoderma coloniale HOM05D004762 ORTHO05D005972 7.6e-12 73.9 71 46.5
Haze_26859 Corylus avellana HOM05D004762 ORTHO05D005972 2.1e-09 65.9 98 34.7
GSVIVG01022727001 Vitis vinifera HOM05D004762 ORTHO05D005972 3.9e-08 61.6 51 52.9
Cre01.g058521 Chlamydomonas reinhardtii HOM05D004762 ORTHO05D005972 5.7e-07 57.8 98 33.7


User provided reference genes

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