Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 5.4e-155 551.2 330 100.0
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 2.0e-85 320.1 258 67.4
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 1.2e-82 310.8 289 65.4
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 6.1e-82 308.5 274 65.0
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 1.1e-78 297.7 268 64.2
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 3.1e-78 296.2 244 68.0
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 7.2e-75 285.0 231 67.1
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 2.1e-66 256.9 255 58.4
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 1.0e-65 254.6 253 58.1
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 9.7e-64 248.1 264 55.7
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 1.0e-60 238.0 243 58.0
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 1.0e-60 238.0 249 57.4
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 7.2e-59 231.9 245 55.9
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 2.0e-56 223.8 260 50.8
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 1.3e-55 221.1 261 50.2
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 9.1e-54 214.9 230 56.1
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 9.4e-51 204.9 262 47.7
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 2.0e-48 197.2 274 44.2
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 1.7e-47 194.1 243 47.7
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 3.7e-47 193.0 259 46.3
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 8.3e-47 191.8 251 46.2
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 1.4e-46 191.0 255 44.3
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 3.1e-46 189.9 262 43.5
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 3.1e-46 189.9 256 47.3
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 9.1e-46 188.3 262 45.8
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 2.7e-45 186.8 266 42.9
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.7e-44 184.1 255 43.1
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 5.0e-44 182.6 273 44.7
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 1.5e-43 181.0 273 44.0
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 1.9e-43 180.6 268 43.3
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.9e-43 180.6 278 43.9
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 3.3e-43 179.9 256 42.6
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 4.2e-43 179.5 251 44.6
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 5.5e-43 179.1 241 43.6
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 1.2e-42 177.9 260 45.0
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.2e-42 177.9 241 43.6
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 1.6e-42 177.6 254 42.1
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 3.6e-42 176.4 226 49.1
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 4.7e-42 176.0 256 43.8
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 8.0e-42 175.3 242 43.8
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 8.0e-42 175.3 262 42.4
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 1.8e-41 174.1 268 42.5
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 3.0e-41 173.3 252 45.6
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 3.0e-41 173.3 247 43.7
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 5.2e-41 172.6 255 44.3
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 8.9e-41 171.8 253 41.1
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 8.9e-41 171.8 262 42.4
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 1.5e-40 171.0 259 43.2
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 2.6e-40 170.2 273 41.0
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 2.6e-40 170.2 281 39.9
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 3.4e-40 169.9 257 40.9
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 3.4e-40 169.9 274 43.1
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 4.4e-40 169.5 252 42.9
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 7.5e-40 168.7 259 42.9
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 9.8e-40 168.3 270 41.5
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 1.3e-39 167.9 261 42.9
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 2.2e-39 167.2 266 40.6
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 2.2e-39 167.2 262 42.4
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 2.9e-39 166.8 247 43.7
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 6.3e-39 165.6 260 41.9
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 8.3e-39 165.2 258 42.6
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 1.1e-38 164.9 259 42.1
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 1.8e-38 164.1 256 41.8
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 2.4e-38 163.7 284 39.8
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 3.2e-38 163.3 246 42.7
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 7.0e-38 162.2 242 42.6
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 7.0e-38 162.2 242 42.6
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 9.2e-38 161.8 269 41.3
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 1.2e-37 161.4 259 40.5
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 1.6e-37 161.0 262 42.4
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 3.5e-37 159.8 250 42.0
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 5.9e-37 159.1 333 38.7
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 7.8e-37 158.7 278 39.6
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 1.3e-36 157.9 259 39.4
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 1.7e-36 157.5 256 42.2
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 2.9e-36 156.8 250 42.4
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 8.6e-36 155.2 265 41.9
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 8.6e-36 155.2 328 38.4
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 1.5e-35 154.5 268 38.1
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 4.3e-35 152.9 266 36.8
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 4.3e-35 152.9 458 29.5
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 5.6e-35 152.5 157 53.5
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 3.6e-34 149.8 295 35.9
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 4.7e-34 149.4 238 40.8
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 1.8e-33 147.5 242 40.1
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 3.1e-33 146.7 234 41.9
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 6.8e-33 145.6 254 39.4
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 8.9e-33 145.2 254 38.2
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.2e-32 144.8 264 39.4
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 1.2e-32 144.8 234 41.0
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 1.2e-32 144.8 265 40.4
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 4.4e-32 142.9 269 39.8
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 9.8e-32 141.7 226 39.4
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 1.7e-31 141.0 225 42.2
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 2.9e-31 140.2 296 35.5
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 6.4e-31 139.0 207 41.1
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 1.2e-29 134.8 252 38.9
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 2.0e-29 134.0 256 35.9
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 1.7e-28 131.0 241 36.5
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 1.1e-27 128.3 200 41.5
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 4.3e-27 126.3 273 35.5
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 7.3e-27 125.6 269 36.8
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 7.3e-27 125.6 240 38.3
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 2.1e-26 124.0 274 32.8
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 4.7e-26 122.9 253 34.0
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 1.1e-25 121.7 187 40.1
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 1.3e-23 114.8 199 36.7
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 4.9e-23 112.8 263 33.8
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 8.3e-23 112.1 221 38.5
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 1.1e-17 95.1 217 31.8
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 1.2e-16 91.7 232 30.6
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 4.9e-15 86.3 212 33.5
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 1.4e-14 84.7 158 38.0
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 2.1e-10 70.9 79 50.6
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 3.6e-10 70.1 231 32.0
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 1.1e-09 68.6 205 29.3
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 1.4e-06 58.2 70 47.1
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 9.3e-06 55.5 136 30.9


User provided reference genes

Program Settings