Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G1076 Trifolium pratense HOM05D004871 ORTHO05D005755 8.0e-137 490.7 307 100.0
Medtr7g033720 Medicago truncatula HOM05D004871 ORTHO05D005755 2.1e-84 316.6 454 54.6
Ca_23007_v3 Cicer arietinum L. HOM05D004871 ORTHO05D005755 1.1e-69 267.7 466 50.2
Lj1g0007322 Lotus japonicus HOM05D004871 ORTHO05D005755 7.7e-63 245.0 467 47.3
Phvul.008G154600 Phaseolus vulgaris HOM05D004871 ORTHO05D005755 5.3e-56 222.2 454 46.3
Haze_14739 Corylus avellana HOM05D004871 ORTHO05D005755 2.0e-55 220.3 467 41.1
Prupe.3G291600 Prunus persica HOM05D004871 ORTHO05D005755 2.6e-55 219.9 464 40.1
Cfa007369 Carpinus fangiana HOM05D004871 ORTHO05D005755 3.4e-55 219.5 463 41.9
CiPaw.03G043700 Carya illinoinensis HOM05D004871 ORTHO05D005755 3.8e-54 216.1 463 36.1
FvH4_6g51200 Fragaria vesca HOM05D004871 ORTHO05D005755 8.5e-54 214.9 405 38.5
FAN02G2556 Fragaria x ananassa HOM05D004871 ORTHO05D005755 8.5e-54 214.9 405 38.5
CANSAT64G1143 Cannabis sativa HOM05D004871 ORTHO05D005755 1.1e-53 214.5 469 36.9
FAN14G1702 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.1e-53 214.5 406 37.9
QL02p074723 Quercus lobata HOM05D004871 ORTHO05D005755 3.2e-53 213.0 466 40.8
TWI12G0316 Tripterygium wilfordii HOM05D004871 ORTHO05D005755 1.6e-52 210.7 463 35.0
RcHm_v2.0_Chr2g0172801 Rosa chinensis HOM05D004871 ORTHO05D005755 2.1e-52 210.3 456 35.1
Thecc.04G017200 Theobroma cacao HOM05D004871 ORTHO05D005755 2.7e-52 209.9 417 38.8
Ciclev10015079m.g Citrus clementina HOM05D004871 ORTHO05D005755 1.0e-51 208.0 475 35.4
Glyma.19G068600 Glycine max HOM05D004871 ORTHO05D005755 1.4e-51 207.6 458 44.8
MD09G1027100 Malus domestica HOM05D004871 ORTHO05D005755 1.4e-51 207.6 463 42.8
Potri.017G069800 Populus trichocarpa HOM05D004871 ORTHO05D005755 1.1e-50 204.5 422 37.0
Duzib147G1217 Durio zibethinus HOM05D004871 ORTHO05D005755 2.6e-50 203.4 419 37.7
MD17G1027100 Malus domestica HOM05D004871 ORTHO05D005755 3.3e-50 203.0 465 34.4
Sabra17G0062100 Salix brachista HOM05D004871 ORTHO05D005755 7.4e-50 201.8 425 36.5
Glyma.16G071200 Glycine max HOM05D004871 ORTHO05D005755 5.3e-48 195.7 451 42.8
ClCG10G013890 Citrullus lanatus HOM05D004871 ORTHO05D005755 1.6e-47 194.1 407 36.6
Gorai.001G265000 Gossypium raimondii HOM05D004871 ORTHO05D005755 1.6e-47 194.1 411 37.5
Gohir.D04G057500 Gossypium hirsutum HOM05D004871 ORTHO05D005755 2.0e-47 193.7 420 36.4
Gorai.012G064200 Gossypium raimondii HOM05D004871 ORTHO05D005755 2.0e-47 193.7 420 36.4
Cpa.g.sc130.82 Carica papaya HOM05D004871 ORTHO05D005755 2.6e-47 193.4 418 36.4
Gohir.D07G229900 Gossypium hirsutum HOM05D004871 ORTHO05D005755 3.5e-47 193.0 411 37.2
COL.COLO4_29115 Corchorus olitorius HOM05D004871 ORTHO05D005755 5.9e-47 192.2 415 37.6
Manes.15G150700 Manihot esculenta HOM05D004871 ORTHO05D005755 1.0e-46 191.4 475 33.5
Gohir.A05G355800 Gossypium hirsutum HOM05D004871 ORTHO05D005755 1.3e-46 191.0 417 36.7
CiPaw.04G028400 Carya illinoinensis HOM05D004871 ORTHO05D005755 1.7e-46 190.7 463 38.0
Hma1.2p1_2120F.1_g314420 Hydrangea macrophylla HOM05D004871 ORTHO05D005755 2.9e-46 189.9 462 34.0
Atru.chr6.2393 Acer truncatum HOM05D004871 ORTHO05D005755 3.8e-46 189.5 470 34.0
CAN.G473.11 Capsicum annuum HOM05D004871 ORTHO05D005755 4.2e-45 186.0 452 33.8
Eucgr.H01852 Eucalyptus grandis HOM05D004871 ORTHO05D005755 1.2e-44 184.5 448 37.1
CSS0032397 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 2.7e-44 183.3 402 36.3
Lalb_Chr14g0362771 Lupinus albus HOM05D004871 ORTHO05D005755 3.6e-44 183.0 459 39.0
Psat3g166880 Pisum sativum HOM05D004871 ORTHO05D005755 5.2e-43 179.1 151 86.1
TAR622G0125 Trochodendron aralioides HOM05D004871 ORTHO05D005755 5.2e-43 179.1 419 34.6
Eucgr.J02242 Eucalyptus grandis HOM05D004871 ORTHO05D005755 6.7e-43 178.7 468 37.0
Dinv35106 Davidia involucrata HOM05D004871 ORTHO05D005755 1.2e-42 177.9 427 39.3
Sc16g0004350 Simmondsia chinensis HOM05D004871 ORTHO05D005755 2.0e-42 177.2 460 37.4
THA.LOC104825322 Tarenaya hassleriana HOM05D004871 ORTHO05D005755 3.3e-42 176.4 465 40.4
Nn3g16731 Nelumbo nucifera HOM05D004871 ORTHO05D005755 5.7e-42 175.6 487 32.0
Nn3g16736 Nelumbo nucifera HOM05D004871 ORTHO05D005755 5.7e-42 175.6 487 32.0
MELO3C026581.2 Cucumis melo HOM05D004871 ORTHO05D005755 7.5e-42 175.3 410 34.4
PGSC0003DMG400012633 Solanum tuberosum HOM05D004871 ORTHO05D005755 7.5e-42 175.3 399 35.6
Sopen02g031150 Solanum pennellii HOM05D004871 ORTHO05D005755 9.7e-42 174.9 449 33.6
Lalb_Chr24g0402861 Lupinus albus HOM05D004871 ORTHO05D005755 1.1e-40 171.4 468 36.1
DCAR_021722 Daucus carota HOM05D004871 ORTHO05D005755 1.8e-40 170.6 402 33.6
CsaV3_3G042800 Cucumis sativus L. HOM05D004871 ORTHO05D005755 2.7e-39 166.8 410 33.7
Sed0007166 Sechium edule HOM05D004871 ORTHO05D005755 2.7e-39 166.8 399 35.3
Cc07_g01680 Coffea canephora HOM05D004871 ORTHO05D005755 4.5e-39 166.0 455 33.0
PGR083G0754 Punica granatum HOM05D004871 ORTHO05D005755 4.5e-39 166.0 414 34.8
PSO063G1038 Papaver somniferum HOM05D004871 ORTHO05D005755 7.7e-39 165.2 420 33.3
Aqoxy5G03783 Aquilegia oxysepala HOM05D004871 ORTHO05D005755 1.0e-38 164.9 441 34.7
Lju41C42T3 Lonicera japonica HOM05D004871 ORTHO05D005755 1.0e-38 164.9 411 34.8
PSO832G2649 Papaver somniferum HOM05D004871 ORTHO05D005755 2.2e-38 163.7 417 34.1
FAN09G0732 Fragaria x ananassa HOM05D000795 ORTHO05D005755 5.0e-38 162.5 99 79.8
Peaxi162Scf00129g00168 Petunia axillaris HOM05D004871 ORTHO05D005755 6.5e-38 162.2 449 30.5
FAN05G3698 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.1e-37 161.4 98 80.6
Oeu054623.1 Olea europaea HOM05D004871 ORTHO05D005755 7.2e-37 158.7 410 33.4
Migut.H00077 Erythranthe guttata HOM05D004871 ORTHO05D005755 1.2e-36 157.9 460 33.7
FAN27G1866 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.4e-35 154.5 93 79.6
MSTRG.24039 Avicennia marina HOM05D004871 ORTHO05D005755 3.0e-35 153.3 402 33.3
Eucgr.L00043 Eucalyptus grandis HOM05D004871 ORTHO05D005755 3.0e-35 153.3 404 39.6
VMungo1383G0924 Vigna mungo HOM05D004871 ORTHO05D005755 3.0e-35 153.3 149 75.8
CARHR261520 Cardamine hirsuta HOM05D004871 ORTHO05D005755 5.2e-35 152.5 422 33.6
BraA04t17009Z Brassica rapa HOM05D004871 ORTHO05D005755 2.0e-34 150.6 420 32.4
A04p13500 Brassica napus HOM05D004871 ORTHO05D005755 5.7e-34 149.1 419 32.0
CSS0034270 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 7.5e-34 148.7 150 75.3
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 9.8e-34 148.3 100 73.0
GSVIVG01032408001 Vitis vinifera HOM05D004871 ORTHO05D005755 1.7e-33 147.5 100 71.0
SGA_v2.0_scaffold18G08277 Striga asiatica HOM05D004871 ORTHO05D005755 1.1e-32 144.8 414 31.2
Rhsim08G0049200 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.4e-32 144.4 94 75.5
C04p47280 Brassica napus HOM05D004871 ORTHO05D005755 1.8e-32 144.1 418 31.8
BolC4t26328H Brassica oleracea HOM05D004871 ORTHO05D005755 1.8e-32 144.1 418 31.8
Thhalv10028043m.g Eutrema salsugineum HOM05D004871 ORTHO05D005755 4.1e-32 142.9 422 32.0
Lj7C599T13 Lonicera japonica HOM05D004871 ORTHO05D005755 1.2e-31 141.4 475 29.7
SalBow2G2412 Salvia bowleyana HOM05D004871 ORTHO05D005755 1.2e-31 141.4 403 31.3
Peaxi162Scf00129g01652 Petunia axillaris HOM05D004871 ORTHO05D005755 1.6e-31 141.0 392 30.9
Nitab4.5_0003318g0120 Nicotiana tabacum HOM05D004871 ORTHO05D005755 4.5e-31 139.4 99 69.7
Oeu018139.1 Olea europaea HOM05D004871 ORTHO05D005755 7.7e-31 138.7 410 32.7
Sp7g01440 Schrenkiella parvula HOM05D004871 ORTHO05D005755 1.7e-30 137.5 429 31.2
Nitab4.5_0002468g0010 Nicotiana tabacum HOM05D004871 ORTHO05D005755 2.9e-30 136.7 268 38.1
Atru.chr6.2392 Acer truncatum HOM05D004871 ORTHO05D005755 1.5e-29 134.4 149 48.3
SalBow1G4779 Salvia bowleyana HOM05D004871 ORTHO05D005755 1.9e-29 134.0 461 30.8
Aa31LG9G1150 Aethionema arabicum HOM05D004871 ORTHO05D005755 7.2e-29 132.1 435 29.0
Gohir.A07G223200 Gossypium hirsutum HOM05D004871 ORTHO05D005755 9.5e-29 131.7 270 40.0
AL7G49360 Arabidopsis lyrata HOM05D004871 ORTHO05D005755 2.1e-28 130.6 439 31.2
Rhsim08G0050600 Rhododendron simsii HOM05D004871 ORTHO05D005755 3.6e-28 129.8 426 30.0
vmacro23391 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 4.7e-28 129.4 400 31.2
TAR371G0422 Trochodendron aralioides HOM05D004871 ORTHO05D005755 6.1e-28 129.0 404 31.7
Rhsim08G0048900 Rhododendron simsii HOM05D004871 ORTHO05D005755 8.0e-28 128.6 410 30.2
TAR371G0152 Trochodendron aralioides HOM05D004871 ORTHO05D005755 1.0e-27 128.3 403 31.5
FAN05G1656 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.8e-27 127.5 256 38.7
TAR371G1027 Trochodendron aralioides HOM05D004871 ORTHO05D005755 6.8e-27 125.6 407 29.7
AT5G40470 Arabidopsis thaliana HOM05D004871 ORTHO05D005755 1.5e-26 124.4 431 30.6
Carub.0007s3511 Capsella rubella HOM05D004871 ORTHO05D005755 3.4e-26 123.2 426 30.0
HPP92_009906 Vanilla planifolia HOM05D004871 ORTHO05D005755 7.5e-26 122.1 436 29.1
FAN09G0037 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.7e-25 120.9 99 64.6
CDE08G0710 Ceratophyllum demersum HOM05D004871 ORTHO05D005755 1.8e-24 117.5 377 31.3
FAN05G3297 Fragaria x ananassa HOM05D004871 ORTHO05D005755 2.4e-24 117.1 162 43.8
HanXRQChr17g0548491 Helianthus annuus HOM05D004871 ORTHO05D005755 2.4e-24 117.1 410 29.5
CSS0039002 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 4.1e-24 116.3 80 71.2
Rhsim08G0050100 Rhododendron simsii HOM05D004871 ORTHO05D005755 4.1e-24 116.3 403 28.8
unitig_899.g14805 Utricularia gibba HOM05D004871 ORTHO05D005755 5.4e-24 115.9 405 29.6
ATR0686G244 Amborella trichopoda HOM05D004871 ORTHO05D005755 1.2e-23 114.8 399 28.6
Rhsim08G0050000 Rhododendron simsii HOM05D004871 ORTHO05D005755 7.8e-23 112.1 338 33.4
Lsat_1_v5_gn_0_47681 Lactuca sativa HOM05D004871 ORTHO05D005755 1.0e-22 111.7 408 31.4
Rhsim08G0049600 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.3e-22 111.3 413 29.1
vmacro18284 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 2.3e-22 110.5 90 62.2
HanXRQChr15g0475301 Helianthus annuus HOM05D004871 ORTHO05D005755 2.9e-22 110.2 428 29.4
vmacro18283 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 2.5e-21 107.1 416 27.4
vmacro23390 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 2.5e-21 107.1 416 27.4
Rhsim08G0049400 Rhododendron simsii HOM05D004871 ORTHO05D005755 3.3e-21 106.7 423 28.1
TAR371G0343 Trochodendron aralioides HOM05D004871 ORTHO05D005755 7.3e-21 105.5 99 55.6
Solyc02g086440.4 Solanum lycopersicum HOM05D004871 ORTHO05D005755 1.6e-20 104.4 149 49.0
BcaB06g27513 Brassica carinata HOM05D004871 ORTHO05D005755 1.0e-19 101.7 272 33.5
Rhsim08G0050200 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.4e-19 101.3 401 27.4
Rhsim08G0050300 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.8e-19 100.9 100 54.0
vmacro18285 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 1.8e-19 100.9 406 28.1
vmacro23392 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 1.8e-19 100.9 406 28.1
TAR633G0371 Trochodendron aralioides HOM05D004871 ORTHO05D005755 4.0e-19 99.8 99 53.5
CSS0033026 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 5.2e-19 99.4 66 74.2
Zm00001eb246170 Zea mays HOM05D004871 ORTHO05D005755 1.5e-18 97.8 413 24.9
BcaB07g32983 Brassica carinata HOM05D004871 ORTHO05D005755 2.0e-18 97.4 91 53.8
Rhsim08G0050500 Rhododendron simsii HOM05D004871 ORTHO05D005755 9.8e-18 95.1 417 27.1
Rhsim08G0050400 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.2e-17 94.0 406 28.6
FAN14G0631 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.8e-16 90.9 68 67.6
Rhsim08G0049300 Rhododendron simsii HOM05D004871 ORTHO05D005755 5.4e-16 89.4 100 49.0
HanXRQChr07g0188231 Helianthus annuus HOM05D004871 ORTHO05D005755 9.2e-16 88.6 139 36.7
Rhsim08G0049500 Rhododendron simsii HOM05D004871 ORTHO05D005755 3.3e-13 80.1 147 36.7
SMO298G0062 Selaginella moellendorffii HOM05D004871 ORTHO05D005755 2.8e-12 77.0 138 34.8
Actinidia35771 Actinidia chinensis HOM05D004871 ORTHO05D005755 1.5e-10 71.2 247 32.8
Cc00_g26710 Coffea canephora HOM05D004871 ORTHO05D005755 7.5e-10 68.9 129 45.0
TAR374G1232 Trochodendron aralioides HOM05D004871 ORTHO05D005755 7.5e-10 68.9 47 68.1
Peaxi162Scf00129g01633 Petunia axillaris HOM05D004871 ORTHO05D005755 2.0e-07 60.8 237 34.2
Rhsim08G0049900 Rhododendron simsii HOM05D004871 ORTHO05D005755 3.0e-06 57.0 133 38.3


User provided reference genes

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