Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10748 Trifolium pratense HOM05D004189 ORTHO05D004092 6.0e-104 380.9 206 100.0
Medtr6g045273 Medicago truncatula HOM05D004189 ORTHO05D004092 3.3e-54 215.7 206 65.5
Lj2g0010006 Lotus japonicus HOM05D004189 ORTHO05D004092 1.3e-45 187.2 213 59.6
Phvul.004G117100 Phaseolus vulgaris HOM05D004189 ORTHO05D004092 7.2e-41 171.4 206 51.9
Lalb_Chr19g0130831 Lupinus albus HOM05D004189 ORTHO05D004092 4.8e-37 158.7 186 60.2
Glyma.20G158500 Glycine max HOM05D004189 ORTHO05D004092 1.3e-29 134.0 215 48.4
Lj5g0019959 Lotus japonicus HOM05D004189 ORTHO05D004092 6.3e-29 131.7 206 43.7
Glyma.16G189900 Glycine max HOM05D004189 ORTHO05D004092 1.8e-28 130.2 147 55.1
Glyma.10G236000 Glycine max HOM05D004189 ORTHO05D004092 1.0e-26 124.4 209 43.5
Glyma.09G139600 Glycine max HOM05D004189 ORTHO05D004092 2.9e-26 122.9 207 47.8
Psat0s2227g0040 Pisum sativum HOM05D004189 ORTHO05D004092 3.8e-26 122.5 185 51.4
arahy.Tifrunner.gnm1.ann1.EQ3RBX Arachis hypogaea HOM05D004189 ORTHO05D004092 1.6e-24 117.1 150 52.0
arahy.Tifrunner.gnm1.ann1.E2ZRS1 Arachis hypogaea HOM05D004189 ORTHO05D004092 2.3e-23 113.2 150 51.3
Medtr1g100627 Medicago truncatula HOM05D004189 ORTHO05D004092 1.2e-22 110.9 209 43.1
Potri.012G141300 Populus trichocarpa HOM05D004189 ORTHO05D004092 2.6e-22 109.8 227 38.8
TPR.G14322 Trifolium pratense HOM05D004189 ORTHO05D004092 4.9e-21 105.5 218 39.4
VMungo0720G0841 Vigna mungo HOM05D004189 ORTHO05D004092 1.1e-20 104.4 206 39.8
Ca_10770_v3 Cicer arietinum L. HOM05D004189 ORTHO05D004092 3.2e-20 102.8 209 45.9
PGR042G0303 Punica granatum HOM05D004189 ORTHO05D004092 2.5e-17 93.2 244 38.5
Sabra15G0153700 Salix brachista HOM05D004189 ORTHO05D004092 4.3e-17 92.4 238 34.9
Medtr1g100623 Medicago truncatula HOM05D004189 ORTHO05D004092 2.1e-16 90.1 202 37.1
Gohir.D12G259100 Gossypium hirsutum HOM05D004189 ORTHO05D004092 5.2e-15 85.5 252 36.9
Cpa.g.sc107.53 Carica papaya HOM05D004189 ORTHO05D004092 2.0e-14 83.6 213 39.0
MELO3C003321.2 Cucumis melo HOM05D004189 ORTHO05D004092 4.4e-14 82.4 187 40.6
Gohir.A12G257800 Gossypium hirsutum HOM05D004189 ORTHO05D004092 1.7e-13 80.5 251 37.1
Cc03_g07610 Coffea canephora HOM05D004189 ORTHO05D004092 8.3e-13 78.2 218 38.5
FAN01G1221 Fragaria x ananassa HOM05D013146 ORTHO05D004092 4.1e-12 75.9 257 30.4
TAR374G0772 Trochodendron aralioides HOM05D004189 ORTHO05D004092 1.0e-10 71.2 203 36.5
Lj8A24G36 Lonicera japonica HOM05D004189 ORTHO05D004092 3.9e-10 69.3 239 29.3
Oeu024223.1 Olea europaea HOM05D004189 ORTHO05D004092 8.6e-10 68.2 260 30.8
TWI23G0464 Tripterygium wilfordii HOM05D004189 ORTHO05D004092 8.6e-10 68.2 122 36.9
MD01G1201000 Malus domestica HOM05D004189 ORTHO05D004092 1.5e-09 67.4 251 32.7
Cfa008320 Carpinus fangiana HOM05D004189 ORTHO05D004092 9.5e-09 64.7 115 37.4
Gorai.008G277500 Gossypium raimondii HOM05D004189 ORTHO05D004092 9.5e-09 64.7 254 34.3
Phvul.007G069800 Phaseolus vulgaris HOM05D004189 ORTHO05D004092 1.6e-08 63.9 206 38.3
CiPaw.03G106300 Carya illinoinensis HOM05D004189 ORTHO05D004092 2.1e-08 63.5 180 32.2
Eucgr.A02790 Eucalyptus grandis HOM05D004189 ORTHO05D004092 2.1e-08 63.5 191 35.6
FAN03G0716 Fragaria x ananassa HOM05D013146 ORTHO05D004092 2.1e-08 63.5 111 45.0
FAN03G0039 Fragaria x ananassa HOM05D013146 ORTHO05D004092 3.6e-08 62.8 111 45.0
COL.COLO4_14310 Corchorus olitorius HOM05D004189 ORTHO05D004092 4.7e-08 62.4 109 41.3
THA.LOC104811978 Tarenaya hassleriana HOM05D004189 ORTHO05D004092 1.4e-07 60.8 241 32.4
HanXRQChr07g0207021 Helianthus annuus HOM05D004189 ORTHO05D004092 3.1e-07 59.7 186 33.3
FAN06G1386 Fragaria x ananassa HOM05D013146 ORTHO05D004092 4.0e-07 59.3 112 38.4
FAN06G2021 Fragaria x ananassa HOM05D013146 ORTHO05D004092 4.0e-07 59.3 112 38.4
Dinv28441 Davidia involucrata HOM05D004189 ORTHO05D004092 5.2e-07 58.9 124 37.1
Sc19g0001510 Simmondsia chinensis HOM05D004189 ORTHO05D004092 5.2e-07 58.9 108 41.7
PSO478G0985 Papaver somniferum HOM05D004189 ORTHO05D004092 8.9e-07 58.2 204 39.2
Prupe.2G294400 Prunus persica HOM05D004189 ORTHO05D004092 1.5e-06 57.4 161 35.4
AL8G26690 Arabidopsis lyrata HOM05D004189 ORTHO05D004092 2.0e-06 57.0 189 31.2
CARHR233000 Cardamine hirsuta HOM05D004189 ORTHO05D004092 2.6e-06 56.6 202 31.2
Ciclev10004574m.g Citrus clementina HOM05D004189 ORTHO05D004092 2.6e-06 56.6 256 29.3
Thhalv10024860m.g Eutrema salsugineum HOM05D004189 ORTHO05D004092 2.6e-06 56.6 225 28.9
RcHm_v2.0_Chr1g0377291 Rosa chinensis HOM05D013146 ORTHO05D004092 2.6e-06 56.6 149 40.3
C07p54440 Brassica napus HOM05D004189 ORTHO05D004092 3.4e-06 56.2 239 28.5
Carub.0007s1540 Capsella rubella HOM05D004189 ORTHO05D004092 3.4e-06 56.2 243 29.6
AT5G52300 Arabidopsis thaliana HOM05D004189 ORTHO05D004092 4.4e-06 55.8 128 33.6
AT4G25580 Arabidopsis thaliana HOM05D004189 ORTHO05D004092 9.9e-06 54.7 235 31.1
Carub.0008s1240 Capsella rubella HOM05D004189 ORTHO05D004092 9.9e-06 54.7 94 38.3


User provided reference genes

Program Settings