Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 1.3e-255 885.9 453 100.0
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 1.7e-231 805.8 455 89.7
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 2.2e-231 805.4 454 91.2
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 2.2e-228 795.4 457 89.1
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 2.3e-217 758.8 452 86.3
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 3.1e-214 748.4 457 84.5
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 1.2e-213 746.5 424 86.1
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 6.6e-212 740.7 456 81.1
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 1.5e-211 739.6 417 84.9
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 1.5e-211 739.6 459 81.3
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 2.1e-210 735.7 419 85.2
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 4.0e-209 731.5 417 84.7
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 2.5e-195 685.6 423 77.3
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 1.2e-189 666.8 420 76.4
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 3.5e-189 665.2 426 75.8
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 2.3e-188 662.5 426 73.0
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 6.6e-188 661.0 417 75.8
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 2.5e-187 659.1 428 74.8
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 3.3e-187 658.7 412 75.7
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 3.3e-187 658.7 417 76.7
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 1.2e-186 656.8 416 75.5
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 8.1e-186 654.1 417 76.5
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 3.1e-185 652.1 452 71.9
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 2.0e-184 649.4 417 76.0
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 3.4e-184 648.7 417 76.0
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 7.6e-184 647.5 409 74.1
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.3e-183 646.7 417 75.8
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 1.7e-183 646.4 420 74.3
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 3.8e-183 645.2 408 74.0
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 3.5e-181 638.6 424 73.6
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 1.3e-180 636.7 409 75.3
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 1.7e-180 636.3 416 73.3
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 1.7e-180 636.3 407 74.2
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 1.7e-180 636.3 425 73.2
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 3.3e-179 632.1 414 72.5
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 6.2e-178 627.9 418 73.9
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 1.3e-175 620.2 405 72.8
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 3.8e-175 618.6 415 71.6
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 1.2e-173 613.6 420 69.3
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 3.0e-172 609.0 412 73.1
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 3.9e-172 608.6 423 72.3
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 3.9e-172 608.6 423 72.3
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 2.5e-171 605.9 407 71.0
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 3.3e-171 605.5 413 69.0
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 1.6e-170 603.2 416 71.2
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 4.0e-169 598.6 438 67.8
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 1.2e-168 597.0 421 69.4
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 1.5e-168 596.7 413 69.0
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 1.9e-166 589.7 427 67.2
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 2.7e-165 585.9 417 68.8
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 2.5e-163 579.3 416 67.5
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 1.6e-162 576.6 414 65.7
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 1.1e-161 573.9 415 67.0
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 5.3e-161 571.6 422 64.0
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 6.4e-159 564.7 421 63.7
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 1.4e-158 563.5 409 65.5
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 3.2e-158 562.4 410 66.3
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 9.3e-158 560.8 409 65.0
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 2.1e-157 559.7 448 63.2
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 7.9e-157 557.8 420 66.2
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 1.0e-156 557.4 406 65.8
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 1.9e-155 553.1 414 64.5
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 3.3e-155 552.4 422 63.0
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 7.4e-155 551.2 431 63.8
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 1.6e-154 550.1 415 63.6
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 3.7e-154 548.9 377 69.8
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 3.7e-154 548.9 414 62.8
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 8.2e-154 547.7 424 62.3
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 1.8e-153 546.6 416 63.5
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 1.8e-153 546.6 408 64.2
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 1.8e-153 546.6 416 63.9
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 2.4e-153 546.2 414 63.0
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 1.0e-151 540.8 420 63.6
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 2.9e-151 539.3 422 61.1
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 1.1e-150 537.3 417 61.9
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 1.1e-150 537.3 417 62.1
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 2.5e-150 536.2 414 62.1
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 5.5e-150 535.0 417 61.9
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 3.5e-149 532.3 411 63.3
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 2.3e-148 529.6 405 62.7
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 5.7e-147 525.0 329 75.1
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 7.4e-147 524.6 414 60.1
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 2.2e-146 523.1 414 62.3
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 2.2e-146 523.1 414 59.9
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 1.1e-145 520.8 449 58.1
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 1.4e-145 520.4 445 59.1
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 2.4e-145 519.6 404 62.1
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 6.9e-145 518.1 463 53.8
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 2.6e-144 516.2 317 75.7
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 3.2e-142 509.2 484 53.9
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 5.7e-139 498.4 386 63.2
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 4.1e-137 492.3 331 68.0
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 4.5e-136 488.8 347 65.4
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 7.7e-136 488.0 363 63.1
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 9.4e-134 481.1 347 64.3
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 2.8e-130 469.5 407 55.3
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 6.3e-130 468.4 322 69.3
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.0e-127 461.1 298 74.8
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 4.2e-126 455.7 429 53.6
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 3.6e-117 426.0 313 64.9
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 3.6e-117 426.0 374 57.5
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 2.7e-112 409.8 348 55.7
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 1.8e-108 397.1 414 51.2
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 3.0e-108 396.4 284 68.3
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 6.8e-100 368.6 280 64.6
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 6.8e-100 368.6 299 62.9
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 2.4e-97 360.1 410 46.8
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 2.4e-97 360.1 396 47.7
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 1.2e-93 347.8 294 55.8
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 1.0e-92 344.7 335 55.5
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 1.5e-91 340.9 296 56.1
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 2.9e-90 336.7 193 83.4
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 3.0e-87 326.6 245 62.9
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 3.6e-85 319.7 325 50.8
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.4e-84 317.8 302 52.3
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 4.7e-77 292.7 218 66.5
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 6.8e-76 288.9 260 54.2
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 1.3e-71 274.6 160 78.1
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.2e-67 261.5 265 49.4
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 7.8e-56 222.2 231 46.8
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.2e-51 208.4 161 60.2
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 1.0e-47 195.3 124 71.0
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 1.1e-46 191.8 131 66.4
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 2.4e-44 184.1 144 61.8
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 5.8e-35 152.9 119 68.1
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 2.2e-34 151.0 282 33.3
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 3.8e-34 150.2 107 70.1
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 4.2e-25 120.2 204 37.3
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.2e-19 102.1 59 83.1
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 5.7e-14 83.2 58 65.5


User provided reference genes

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