Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10191 Trifolium pratense HOM05D005673 ORTHO05D007081 8.0e-143 510.4 252 100.0
Ca_07421_v3 Cicer arietinum L. HOM05D005673 ORTHO05D007081 1.9e-123 446.0 256 87.9
Lj1g0007847 Lotus japonicus HOM05D005673 ORTHO05D007081 1.3e-116 423.3 256 83.2
Glyma.08G340700 Glycine max HOM05D005673 ORTHO05D007081 1.0e-105 387.1 262 76.0
Phvul.008G138600 Phaseolus vulgaris HOM05D005673 ORTHO05D007081 4.8e-103 378.3 262 74.0
Lalb_Chr19g0126251 Lupinus albus HOM05D005673 ORTHO05D007081 1.4e-102 376.7 257 75.1
arahy.Tifrunner.gnm1.ann1.R12QR1 Arachis hypogaea HOM05D005673 ORTHO05D007081 1.9e-96 356.3 259 69.1
arahy.Tifrunner.gnm1.ann1.YNZN7C Arachis hypogaea HOM05D005673 ORTHO05D007081 8.1e-95 350.9 259 68.7
Ciclev10032487m.g Citrus clementina HOM05D005673 ORTHO05D007081 4.8e-79 298.5 261 57.9
Potri.008G046400 Populus trichocarpa HOM05D005673 ORTHO05D007081 1.8e-78 296.6 260 57.7
Cfa001572 Carpinus fangiana HOM05D005673 ORTHO05D007081 5.3e-78 295.0 258 57.4
CiPaw.02G177700 Carya illinoinensis HOM05D005673 ORTHO05D007081 1.5e-77 293.5 258 58.1
Haze_16957 Corylus avellana HOM05D005673 ORTHO05D007081 2.6e-77 292.7 258 56.6
QL08p057314 Quercus lobata HOM05D005673 ORTHO05D007081 4.5e-77 292.0 260 56.9
Thecc.10G064600 Theobroma cacao HOM05D005673 ORTHO05D007081 5.9e-77 291.6 259 57.1
Medtr7g047440 Medicago truncatula HOM05D005673 ORTHO05D007081 7.7e-77 291.2 155 92.9
Medtr7g451610 Medicago truncatula HOM05D005673 ORTHO05D007081 7.7e-77 291.2 155 92.9
Medtr7g451710 Medicago truncatula HOM05D005673 ORTHO05D007081 7.7e-77 291.2 155 92.9
Sabra08G0032600 Salix brachista HOM05D005673 ORTHO05D007081 1.3e-76 290.4 260 56.5
Manes.07G105200 Manihot esculenta HOM05D005673 ORTHO05D007081 2.9e-76 289.3 259 56.8
MD01G1114500 Malus domestica HOM05D005673 ORTHO05D007081 6.5e-76 288.1 250 60.4
MD07G1182600 Malus domestica HOM05D005673 ORTHO05D007081 1.1e-75 287.3 250 61.2
TWI38G1168 Tripterygium wilfordii HOM05D005673 ORTHO05D007081 1.4e-75 287.0 255 56.5
GSVIVG01032643001 Vitis vinifera HOM05D005673 ORTHO05D007081 5.5e-75 285.0 256 57.0
CANSAT11G2273 Cannabis sativa HOM05D005673 ORTHO05D007081 1.2e-74 283.9 256 56.2
Gorai.010G203600 Gossypium raimondii HOM05D005673 ORTHO05D007081 1.2e-74 283.9 253 57.3
Gohir.A06G179004 Gossypium hirsutum HOM05D005673 ORTHO05D007081 1.6e-74 283.5 253 57.7
Gohir.D06G174000 Gossypium hirsutum HOM05D005673 ORTHO05D007081 3.6e-74 282.3 253 56.9
Cfa005598 Carpinus fangiana HOM05D005673 ORTHO05D007081 3.0e-73 279.3 260 55.4
COL.COLO4_08204 Corchorus olitorius HOM05D005673 ORTHO05D007081 5.1e-73 278.5 259 55.2
Aqoxy4G03141 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 6.7e-73 278.1 254 55.9
Duzib114G0197 Durio zibethinus HOM05D005673 ORTHO05D007081 8.8e-73 277.7 259 55.2
FvH4_7g20560 Fragaria vesca HOM05D005673 ORTHO05D007081 1.1e-72 277.3 251 57.0
FAN06G0951 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.1e-72 277.3 251 57.0
FAN10G0505 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.5e-72 276.9 251 57.0
FAN03G2886 Fragaria x ananassa HOM05D005673 ORTHO05D007081 2.5e-72 276.2 251 56.6
FAN06G2416 Fragaria x ananassa HOM05D005673 ORTHO05D007081 2.5e-72 276.2 251 56.6
EL10Ac2g03532 Beta vulgaris HOM05D005673 ORTHO05D007081 3.3e-72 275.8 260 54.6
Hund22450 Selenicereus undatus HOM05D005673 ORTHO05D007081 3.3e-72 275.8 258 54.3
FAN01G1496 Fragaria x ananassa HOM05D005673 ORTHO05D007081 5.7e-72 275.0 251 57.0
FAN01G2008 Fragaria x ananassa HOM05D005673 ORTHO05D007081 5.7e-72 275.0 251 57.0
Sed0006326 Sechium edule HOM05D005673 ORTHO05D007081 9.7e-72 274.2 261 55.6
RcHm_v2.0_Chr1g0364441 Rosa chinensis HOM05D005673 ORTHO05D007081 1.3e-71 273.9 251 56.2
PSO339G1442 Papaver somniferum HOM05D005673 ORTHO05D007081 1.1e-70 270.8 258 53.1
ClCG02G013770 Citrullus lanatus HOM05D005673 ORTHO05D007081 1.8e-70 270.0 260 55.8
CSS0045417 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 3.1e-70 269.2 255 53.7
PSO384G5123 Papaver somniferum HOM05D005673 ORTHO05D007081 3.1e-70 269.2 256 53.9
AUR62036006 Chenopodium quinoa HOM05D005673 ORTHO05D007081 4.1e-70 268.9 259 57.1
CsaV3_5G006400 Cucumis sativus L. HOM05D005673 ORTHO05D007081 4.1e-70 268.9 257 56.4
Nitab4.5_0000575g0020 Nicotiana tabacum HOM05D005673 ORTHO05D007081 5.3e-70 268.5 261 51.7
THA.LOC104825722 Tarenaya hassleriana HOM05D005673 ORTHO05D007081 6.9e-70 268.1 259 51.7
Ah.16g108000 Amaranthus hybridus HOM05D005673 ORTHO05D007081 1.2e-69 267.3 269 53.2
Actinidia38234 Actinidia chinensis HOM05D005673 ORTHO05D007081 1.5e-69 266.9 251 54.2
CSS0019421 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 2.6e-69 266.2 255 52.9
Actinidia03012 Actinidia chinensis HOM05D005673 ORTHO05D007081 5.9e-69 265.0 251 54.2
Nitab4.5_0002078g0030 Nicotiana tabacum HOM05D005673 ORTHO05D007081 7.7e-69 264.6 261 51.3
PGR142G2170 Punica granatum HOM05D005673 ORTHO05D007081 7.7e-69 264.6 259 51.0
PGSC0003DMG400002916 Solanum tuberosum HOM05D005673 ORTHO05D007081 1.7e-68 263.5 257 52.5
MELO3C011718.2 Cucumis melo HOM05D005673 ORTHO05D007081 2.2e-68 263.1 260 55.4
Solyc12g009500.2 Solanum lycopersicum HOM05D005673 ORTHO05D007081 5.0e-68 261.9 257 52.1
CAN.G551.89 Capsicum annuum HOM05D005673 ORTHO05D007081 6.5e-68 261.5 257 51.0
Sopen12g004500 Solanum pennellii HOM05D005673 ORTHO05D007081 1.1e-67 260.8 257 51.8
Eucgr.G02786 Eucalyptus grandis HOM05D005673 ORTHO05D007081 4.2e-67 258.8 255 52.9
BcaC04g21010 Brassica carinata HOM05D005673 ORTHO05D007081 6.1e-66 255.0 253 50.6
C09p36690 Brassica napus HOM05D005673 ORTHO05D007081 6.1e-66 255.0 253 50.6
BolC9t56500H Brassica oleracea HOM05D005673 ORTHO05D007081 6.1e-66 255.0 253 50.6
Lj1A926T37 Lonicera japonica HOM05D005673 ORTHO05D007081 1.8e-65 253.4 255 49.8
Lj1A928T62 Lonicera japonica HOM05D005673 ORTHO05D007081 1.8e-65 253.4 255 49.8
MBI14_g17793_MAGBIO Magnolia biondii HOM05D005673 ORTHO05D007081 2.3e-65 253.1 233 54.1
A09p28870 Brassica napus HOM05D005673 ORTHO05D007081 3.0e-65 252.7 253 50.6
Aa31LG9G11910 Aethionema arabicum HOM05D005673 ORTHO05D007081 6.7e-65 251.5 257 50.2
ECA233G0150 Erigeron canadensis HOM05D005673 ORTHO05D007081 1.5e-64 250.4 246 52.8
Prupe.2G221200 Prunus persica HOM05D005673 ORTHO05D007081 1.5e-64 250.4 211 60.7
Lsat_1_v5_gn_8_21281 Lactuca sativa HOM05D005673 ORTHO05D007081 2.0e-64 250.0 260 50.8
MSTRG.9191 Avicennia marina HOM05D005673 ORTHO05D007081 2.6e-64 249.6 256 48.4
Carub.0006s2866 Capsella rubella HOM05D005673 ORTHO05D007081 4.4e-64 248.8 260 49.2
Thhalv10028887m.g Eutrema salsugineum HOM05D005673 ORTHO05D007081 4.4e-64 248.8 260 50.4
HanXRQChr08g0219361 Helianthus annuus HOM05D005673 ORTHO05D007081 4.4e-64 248.8 255 49.8
SalBow4G0159 Salvia bowleyana HOM05D005673 ORTHO05D007081 4.4e-64 248.8 251 48.2
BcaB01g01447 Brassica carinata HOM05D005673 ORTHO05D007081 5.7e-64 248.4 262 48.9
AL6G43874 Arabidopsis lyrata HOM05D005673 ORTHO05D007081 9.7e-64 247.7 259 49.0
CARHR261110 Cardamine hirsuta HOM05D005673 ORTHO05D007081 1.7e-63 246.9 259 49.4
AT4G10090 Arabidopsis thaliana HOM05D005673 ORTHO05D007081 2.2e-63 246.5 259 48.6
Sp6g07430 Schrenkiella parvula HOM05D005673 ORTHO05D007081 2.2e-63 246.5 259 49.4
TAR623G0755 Trochodendron aralioides HOM05D005673 ORTHO05D007081 3.7e-63 245.7 216 57.9
Cc09_g02320 Coffea canephora HOM05D005673 ORTHO05D007081 1.4e-62 243.8 253 49.0
Rhsim03G0121300 Rhododendron simsii HOM05D005673 ORTHO05D007081 5.9e-61 238.4 224 52.7
SGA_v2.0_scaffold62G21443 Striga asiatica HOM05D005673 ORTHO05D007081 2.9e-60 236.1 249 48.2
Atru.BG.271.p Acer truncatum HOM05D005673 ORTHO05D007081 3.8e-60 235.7 231 52.8
DCAR_015256 Daucus carota HOM05D005673 ORTHO05D007081 8.5e-60 234.6 309 43.7
Sc20g0002250 Simmondsia chinensis HOM05D005673 ORTHO05D007081 1.2e-58 230.7 203 56.2
HPP92_012063 Vanilla planifolia HOM05D005673 ORTHO05D007081 6.1e-58 228.4 264 45.1
VMungo1383G1385 Vigna mungo HOM05D005673 ORTHO05D007081 1.0e-57 227.6 155 73.5
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 1.8e-57 226.9 249 46.2
Migut.F02013 Erythranthe guttata HOM05D005673 ORTHO05D007081 6.3e-55 218.4 232 49.1
Oeu008278.1 Olea europaea HOM05D005673 ORTHO05D007081 1.1e-54 217.6 212 51.9
Zm00001eb378810 Zea mays HOM05D005673 ORTHO05D007081 9.1e-54 214.5 256 45.7
Psat3g152960 Pisum sativum HOM05D005673 ORTHO05D007081 2.6e-53 213.0 121 87.6
vmacro07099 Vaccinium macrocarpon HOM05D005673 ORTHO05D007081 7.7e-53 211.5 232 49.1
Psat0s9937g0040 Pisum sativum HOM05D005673 ORTHO05D007081 2.2e-52 209.9 108 94.4
AUR62041616 Chenopodium quinoa HOM05D005673 ORTHO05D007081 3.8e-52 209.1 259 46.3
Os03g0284000 Oryza sativa ssp. japonica HOM05D005673 ORTHO05D007081 3.8e-52 209.1 249 44.6
Atru.chr12.608 Acer truncatum HOM05D005673 ORTHO05D007081 4.2e-51 205.7 164 63.4
Peaxi162Scf00170g00413 Petunia axillaris HOM05D005673 ORTHO05D007081 1.4e-49 200.7 248 46.0
Nn2g10602 Nelumbo nucifera HOM05D005673 ORTHO05D007081 1.8e-49 200.3 226 49.6
Dinv25934 Davidia involucrata HOM05D005673 ORTHO05D007081 4.1e-46 189.1 156 61.5
Hma1.2p1_0348F.1_g131860 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 2.2e-44 183.3 151 56.3
Psat3g152920 Pisum sativum HOM05D005673 ORTHO05D007081 1.5e-43 180.6 101 87.1
MD00G1166800 Malus domestica HOM05D005673 ORTHO05D007081 6.1e-42 175.3 184 49.5
Psat3g153040 Pisum sativum HOM05D005673 ORTHO05D007081 2.3e-41 173.3 101 84.2
Mapoly0003s0199 Marchantia polymorpha HOM05D005673 ORTHO05D007081 7.7e-37 158.3 252 38.5
SGA_v2.0_scaffold17G08196 Striga asiatica HOM05D005673 ORTHO05D007081 1.6e-34 150.6 154 46.1
Medtr7g050450 Medicago truncatula HOM05D005673 ORTHO05D007081 1.8e-33 147.1 167 52.7
HPP92_012075 Vanilla planifolia HOM05D005673 ORTHO05D007081 2.8e-31 139.8 150 46.0
SMO347G0616 Selaginella moellendorffii HOM05D005673 ORTHO05D007081 2.4e-30 136.7 216 37.0
Pp3c2_31740 Physcomitrium patens HOM05D005673 ORTHO05D007081 9.2e-30 134.8 276 31.2
unitig_37.g12298 Utricularia gibba HOM05D005673 ORTHO05D007081 5.0e-28 129.0 124 47.6
AagrBONN_evm.TU.Sc2ySwM_362.1467 Anthoceros agrestis HOM05D005673 ORTHO05D007081 1.9e-27 127.1 229 32.3
PSO713G0026 Papaver somniferum HOM05D005673 ORTHO05D007081 4.7e-26 122.5 162 45.1
VMungo1383G3547 Vigna mungo HOM05D005673 ORTHO05D007081 5.4e-22 109.0 80 70.0
Aqoxy4G03136 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 1.2e-21 107.8 157 44.6
unitig_37.g12299 Utricularia gibba HOM05D005673 ORTHO05D007081 1.3e-15 87.8 80 48.8
HanXRQChr02g0043631 Helianthus annuus HOM05D005673 ORTHO05D007081 7.1e-14 82.0 92 40.2
Cpa.g.c44350 Carica papaya HOM05D005673 ORTHO05D007081 3.9e-12 76.3 72 52.8
Hma1.2p1_0348F.1_g131840 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 3.9e-12 76.3 76 51.3
Cpa.g.sc5360.1 Carica papaya HOM05D005673 ORTHO05D007081 4.3e-11 72.8 48 68.8
BcaB04g18418 Brassica carinata HOM05D005673 ORTHO05D007081 7.3e-11 72.0 90 43.3
HanXRQChr13g0394111 Helianthus annuus HOM05D005673 ORTHO05D007081 3.6e-10 69.7 67 46.3
CBR_g23354 Chara braunii HOM05D005673 ORTHO05D007081 1.4e-09 67.8 110 38.2


User provided reference genes

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