Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104798327 Tarenaya hassleriana HOM05D001780 ORTHO05D004373 8.0e-61 236.9 118 100.0
THA.LOC104803625 Tarenaya hassleriana HOM05D001780 ORTHO05D004373 1.6e-16 89.7 62 71.0
Cfa015768 Carpinus fangiana HOM05D001780 ORTHO05D004373 6.0e-16 87.8 67 64.2
Manes.04G040600 Manihot esculenta HOM05D001780 ORTHO05D004373 7.9e-16 87.4 56 71.4
Nitab4.5_0001198g0100 Nicotiana tabacum HOM05D001780 ORTHO05D004373 1.0e-15 87.0 56 73.2
HanXRQChr10g0310431 Helianthus annuus HOM05D001780 ORTHO05D004373 1.3e-15 86.7 56 73.2
Thecc.05G003300 Theobroma cacao HOM05D001780 ORTHO05D004373 1.3e-15 86.7 71 63.4
MSTRG.21338 Avicennia marina HOM05D001780 ORTHO05D004373 1.8e-15 86.3 67 62.7
COL.COLO4_14418 Corchorus olitorius HOM05D001780 ORTHO05D004373 1.8e-15 86.3 71 63.4
Actinidia34617 Actinidia chinensis HOM05D001780 ORTHO05D004373 2.3e-15 85.9 56 71.4
MBI18_g09771_MAGBIO Magnolia biondii HOM05D001780 ORTHO05D004373 2.3e-15 85.9 68 60.3
QL10p047812 Quercus lobata HOM05D001780 ORTHO05D004373 2.3e-15 85.9 56 69.6
Solyc11g012140.2 Solanum lycopersicum HOM05D001780 ORTHO05D004373 2.3e-15 85.9 56 71.4
Sopen11g006930 Solanum pennellii HOM05D001780 ORTHO05D004373 2.3e-15 85.9 56 71.4
Dinv15122 Davidia involucrata HOM05D001780 ORTHO05D004373 3.0e-15 85.5 56 71.4
Actinidia35963 Actinidia chinensis HOM05D001780 ORTHO05D004373 3.9e-15 85.1 57 70.2
CiPaw.01G102300 Carya illinoinensis HOM05D001780 ORTHO05D004373 3.9e-15 85.1 67 61.2
PGSC0003DMG400013343 Solanum tuberosum HOM05D001780 ORTHO05D004373 3.9e-15 85.1 56 71.4
Atru.chr3.1561 Acer truncatum HOM05D001780 ORTHO05D004373 5.1e-15 84.7 56 71.4
Atru.chr3.1583 Acer truncatum HOM05D001780 ORTHO05D004373 5.1e-15 84.7 56 71.4
Rhsim05G0075700 Rhododendron simsii HOM05D001780 ORTHO05D004373 5.1e-15 84.7 55 72.7
GSVIVG01010735001 Vitis vinifera HOM05D001780 ORTHO05D004373 8.7e-15 84.0 65 61.5
Aa31LG10G13700 Aethionema arabicum HOM05D001780 ORTHO05D004373 1.1e-14 83.6 67 61.2
AL6G44170 Arabidopsis lyrata HOM05D001780 ORTHO05D004373 1.1e-14 83.6 67 58.2
PGR142G2637 Punica granatum HOM05D001780 ORTHO05D004373 1.5e-14 83.2 67 58.2
Haze_00734 Corylus avellana HOM05D001780 ORTHO05D004373 1.9e-14 82.8 55 72.7
Oeu061694.1 Olea europaea HOM05D001780 ORTHO05D004373 1.9e-14 82.8 67 59.7
MD04G1037200 Malus domestica HOM05D001780 ORTHO05D004373 3.3e-14 82.0 56 69.6
BcaC02g08915 Brassica carinata HOM05D001780 ORTHO05D004373 4.3e-14 81.6 67 59.7
C04p49170 Brassica napus HOM05D001780 ORTHO05D004373 4.3e-14 81.6 67 59.7
BolC4t26502H Brassica oleracea HOM05D001780 ORTHO05D004373 4.3e-14 81.6 67 59.7
TAR362G1083 Trochodendron aralioides HOM05D001780 ORTHO05D004373 4.3e-14 81.6 55 70.9
AT4G10320 Arabidopsis thaliana HOM05D001780 ORTHO05D004373 5.6e-14 81.3 56 67.9
arahy.Tifrunner.gnm1.ann1.05K2HA Arachis hypogaea HOM05D001780 ORTHO05D004373 5.6e-14 81.3 67 56.7
arahy.Tifrunner.gnm1.ann1.AHZV2Y Arachis hypogaea HOM05D001780 ORTHO05D004373 5.6e-14 81.3 67 56.7
A04p14990 Brassica napus HOM05D001780 ORTHO05D004373 5.6e-14 81.3 67 59.7
CANSAT78G0939 Cannabis sativa HOM05D001780 ORTHO05D004373 5.6e-14 81.3 56 69.6
COL.COLO4_24691 Corchorus olitorius HOM05D001780 ORTHO05D004373 5.6e-14 81.3 71 59.2
Gohir.A01G231000 Gossypium hirsutum HOM05D001780 ORTHO05D004373 5.6e-14 81.3 67 61.2
RcHm_v2.0_Chr4g0408181 Rosa chinensis HOM05D001780 ORTHO05D004373 5.6e-14 81.3 56 67.9
RhsimUnG0171500 Rhododendron simsii HOM05D001780 ORTHO05D004373 7.4e-14 80.9 55 69.1
ECA234G4143 Erigeron canadensis HOM05D001780 ORTHO05D004373 9.6e-14 80.5 56 66.1
Hma1.2p1_0597F.1_g186560 Hydrangea macrophylla HOM05D001780 ORTHO05D004373 9.6e-14 80.5 67 59.7
TWI63G0569 Tripterygium wilfordii HOM05D001780 ORTHO05D004373 1.3e-13 80.1 56 67.9
Ca_26060_v3 Cicer arietinum L. HOM05D001780 ORTHO05D004373 1.6e-13 79.7 67 56.7
Dinv44242 Davidia involucrata HOM05D001780 ORTHO05D004373 1.6e-13 79.7 67 58.2
BcaB06g27675 Brassica carinata HOM05D001780 ORTHO05D004373 2.1e-13 79.3 67 58.2
BraA04t17141Z Brassica rapa HOM05D001780 ORTHO05D004373 2.1e-13 79.3 67 58.2
Lj6C607G11 Lonicera japonica HOM05D001780 ORTHO05D004373 2.1e-13 79.3 56 66.1
Atru.chr12.1705 Acer truncatum HOM05D001780 ORTHO05D004373 3.7e-13 78.6 56 67.9
Cc04_g11170 Coffea canephora HOM05D001780 ORTHO05D004373 3.7e-13 78.6 56 67.9
SGA_v2.0_scaffold29G12214 Striga asiatica HOM05D001780 ORTHO05D004373 3.7e-13 78.6 56 66.1
TPR.G13745 Trifolium pratense HOM05D001780 ORTHO05D004373 3.7e-13 78.6 67 56.7
Gohir.D01G221100 Gossypium hirsutum HOM05D001780 ORTHO05D004373 4.8e-13 78.2 56 69.6
Gorai.002G267700 Gossypium raimondii HOM05D001780 ORTHO05D004373 4.8e-13 78.2 56 69.6
Medtr4g076850 Medicago truncatula HOM05D001780 ORTHO05D004373 4.8e-13 78.2 67 56.7
Peaxi162Scf00558g00043 Petunia axillaris HOM05D001780 ORTHO05D004373 4.8e-13 78.2 56 66.1
BcaNung01700 Brassica carinata HOM05D001780 ORTHO05D004373 6.2e-13 77.8 56 66.1
CARHR218340 Cardamine hirsuta HOM05D001780 ORTHO05D004373 6.2e-13 77.8 55 65.5
Lj3g0013099 Lotus japonicus HOM05D001780 ORTHO05D004373 6.2e-13 77.8 65 63.1
Sp7g00280 Schrenkiella parvula HOM05D001780 ORTHO05D004373 6.2e-13 77.8 67 58.2
HPP92_012342 Vanilla planifolia HOM05D001780 ORTHO05D004373 6.2e-13 77.8 64 60.9
Carub.0006s2892 Capsella rubella HOM05D001780 ORTHO05D004373 8.1e-13 77.4 55 65.5
Thhalv10027624m.g Eutrema salsugineum HOM05D001780 ORTHO05D004373 8.1e-13 77.4 67 55.2
Sc20g0004730 Simmondsia chinensis HOM05D001780 ORTHO05D004373 8.1e-13 77.4 67 56.7
TWI56G0090 Tripterygium wilfordii HOM05D001780 ORTHO05D004373 8.1e-13 77.4 59 64.4
Duzib106G1771 Durio zibethinus HOM05D001780 ORTHO05D004373 1.1e-12 77.0 56 66.1
Potri.017G033200 Populus trichocarpa HOM05D001780 ORTHO05D004373 1.4e-12 76.6 56 66.1
Sabra07G0102600 Salix brachista HOM05D001780 ORTHO05D004373 1.4e-12 76.6 63 61.9
FvH4_4g11470 Fragaria vesca HOM05D001780 ORTHO05D004373 1.8e-12 76.3 56 64.3
FAN22G0035 Fragaria x ananassa HOM05D001780 ORTHO05D004373 1.8e-12 76.3 56 64.3
Lsat_1_v5_gn_5_77240 Lactuca sativa HOM05D001780 ORTHO05D004373 1.8e-12 76.3 68 54.4
Psat7g172640 Pisum sativum HOM05D001780 ORTHO05D004373 1.8e-12 76.3 67 55.2
PSO675G8171 Papaver somniferum HOM05D001780 ORTHO05D004373 2.4e-12 75.9 56 64.3
AUR62002268 Chenopodium quinoa HOM05D001780 ORTHO05D004373 3.1e-12 75.5 67 55.2
Oeu025915.1 Olea europaea HOM05D001780 ORTHO05D004373 3.1e-12 75.5 56 62.5
PSO063G4644 Papaver somniferum HOM05D001780 ORTHO05D004373 3.1e-12 75.5 60 60.0
PSO541G0190 Papaver somniferum HOM05D001780 ORTHO05D004373 3.1e-12 75.5 56 64.3
Aqoxy7G01270 Aquilegia oxysepala HOM05D001780 ORTHO05D004373 4.0e-12 75.1 67 56.7
DCAR_019070 Daucus carota HOM05D001780 ORTHO05D004373 6.9e-12 74.3 67 50.7
FAN07G0072 Fragaria x ananassa HOM05D001780 ORTHO05D004373 6.9e-12 74.3 67 53.7
FAN17G0725 Fragaria x ananassa HOM05D001780 ORTHO05D004373 6.9e-12 74.3 56 62.5
EL10Ac3g05575 Beta vulgaris HOM05D001780 ORTHO05D004373 1.2e-11 73.6 67 53.7
Dinv33217 Davidia involucrata HOM05D001780 ORTHO05D004373 1.2e-11 73.6 56 64.3
Carub.0003s2335 Capsella rubella HOM05D001780 ORTHO05D004373 1.5e-11 73.2 67 50.7
ATR0789G163 Amborella trichopoda HOM05D001780 ORTHO05D004373 2.0e-11 72.8 68 48.5
MELO3C017728.2 Cucumis melo HOM05D001780 ORTHO05D004373 3.4e-11 72.0 57 59.6
Sabra17G0020800 Salix brachista HOM05D001780 ORTHO05D004373 3.4e-11 72.0 56 64.3
Eucgr.H00406 Eucalyptus grandis HOM05D001780 ORTHO05D004373 4.5e-11 71.6 56 62.5
AL7G50050 Arabidopsis lyrata HOM05D001780 ORTHO05D004373 7.6e-11 70.9 57 63.2
TAR633G2511 Trochodendron aralioides HOM05D001780 ORTHO05D004373 7.6e-11 70.9 56 62.5
Lsat_1_v5_gn_5_76161 Lactuca sativa HOM05D001780 ORTHO05D004373 1.3e-10 70.1 68 50.0
Sed0001787 Sechium edule HOM05D001780 ORTHO05D004373 1.3e-10 70.1 57 57.9
arahy.Tifrunner.gnm1.ann1.NNH8AZ Arachis hypogaea HOM05D001780 ORTHO05D004373 1.7e-10 69.7 67 47.8
CsaV3_4G003190 Cucumis sativus L. HOM05D001780 ORTHO05D004373 1.7e-10 69.7 57 57.9
ClCG07G015560 Citrullus lanatus HOM05D001780 ORTHO05D004373 2.2e-10 69.3 57 57.9
unitig_0.g306 Utricularia gibba HOM05D001780 ORTHO05D004373 2.2e-10 69.3 65 50.8
AUR62015426 Chenopodium quinoa HOM05D001780 ORTHO05D004373 3.8e-10 68.6 62 53.2
Nn1g08648 Nelumbo nucifera HOM05D001780 ORTHO05D004373 3.8e-10 68.6 58 56.9
Phvul.011G023400 Phaseolus vulgaris HOM05D001780 ORTHO05D004373 4.9e-10 68.2 67 50.7
VMungo1127G1244 Vigna mungo HOM05D001780 ORTHO05D004373 4.9e-10 68.2 67 50.7
Migut.D00680 Erythranthe guttata HOM05D001780 ORTHO05D004373 6.4e-10 67.8 56 58.9
Glyma.11G094300 Glycine max HOM05D001780 ORTHO05D004373 6.4e-10 67.8 67 52.2
Glyma.12G020700 Glycine max HOM05D001780 ORTHO05D004373 6.4e-10 67.8 67 50.7
CDE05G1969 Ceratophyllum demersum HOM05D001780 ORTHO05D004373 1.4e-09 66.6 67 50.7
Lalb_Chr09g0320441 Lupinus albus HOM05D001780 ORTHO05D004373 5.5e-09 64.7 70 55.7
Zm00001eb275200 Zea mays HOM05D001780 ORTHO05D004373 9.3e-09 63.9 62 48.4
Zm00001eb386920 Zea mays HOM05D001780 ORTHO05D004373 1.6e-08 63.2 62 46.8


User provided reference genes

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