Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3455 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.9e-56 222.2 107 100.0
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.7e-49 199.1 105 89.5
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 4.1e-48 194.5 103 87.4
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 5.4e-48 194.1 101 88.1
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 1.6e-47 192.6 101 88.1
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 2.7e-47 191.8 101 88.1
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 2.7e-47 191.8 105 85.7
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 4.6e-47 191.0 101 87.1
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 4.6e-47 191.0 101 87.1
MD03G1113000 Malus domestica HOM05D005643 ORTHO05D006819 6.0e-47 190.7 101 89.1
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 6.0e-47 190.7 101 89.1
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 1.0e-46 189.9 101 88.1
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 1.0e-46 189.9 101 87.1
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 1.3e-46 189.5 101 85.1
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 1.3e-46 189.5 101 86.1
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 1.7e-46 189.1 101 85.1
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 3.0e-46 188.3 101 84.2
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 3.0e-46 188.3 101 84.2
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 3.0e-46 188.3 101 86.1
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 5.1e-46 187.6 101 84.2
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 6.6e-46 187.2 101 86.1
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 6.6e-46 187.2 101 85.1
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 6.6e-46 187.2 101 85.1
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 8.6e-46 186.8 101 84.2
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 8.6e-46 186.8 101 84.2
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 8.6e-46 186.8 101 83.2
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 1.1e-45 186.4 101 83.2
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 1.1e-45 186.4 101 84.2
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 1.1e-45 186.4 101 83.2
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 1.1e-45 186.4 101 83.2
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 1.1e-45 186.4 101 84.2
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 1.5e-45 186.0 101 85.1
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 1.5e-45 186.0 101 85.1
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 1.5e-45 186.0 101 85.1
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 1.5e-45 186.0 101 84.2
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 1.9e-45 185.7 101 87.1
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 1.9e-45 185.7 101 82.2
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 1.9e-45 185.7 101 84.2
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 1.9e-45 185.7 101 86.1
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 1.9e-45 185.7 101 86.1
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 1.9e-45 185.7 101 83.2
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 2.5e-45 185.3 101 83.2
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 2.5e-45 185.3 101 82.2
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 2.5e-45 185.3 101 85.1
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 2.5e-45 185.3 101 83.2
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 3.3e-45 184.9 101 83.2
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 3.3e-45 184.9 101 84.2
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 3.3e-45 184.9 101 84.2
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 3.3e-45 184.9 101 83.2
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 4.3e-45 184.5 101 80.2
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 4.3e-45 184.5 101 84.2
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 5.6e-45 184.1 101 80.2
Actinidia24093 Actinidia chinensis HOM05D005643 ORTHO05D006819 7.3e-45 183.7 101 82.2
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 7.3e-45 183.7 101 83.2
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 7.3e-45 183.7 101 84.2
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 9.5e-45 183.3 101 83.2
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 9.5e-45 183.3 101 80.2
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 9.5e-45 183.3 101 83.2
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 1.2e-44 183.0 101 83.2
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 1.2e-44 183.0 103 79.6
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 1.6e-44 182.6 101 81.2
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 2.8e-44 181.8 101 81.2
arahy.Tifrunner.gnm1.ann1.J7FTHV Arachis hypogaea HOM05D005643 ORTHO05D006819 2.8e-44 181.8 101 81.2
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 2.8e-44 181.8 101 81.2
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 2.8e-44 181.8 101 81.2
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 2.8e-44 181.8 101 82.2
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 2.8e-44 181.8 101 84.2
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 2.8e-44 181.8 101 83.2
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 4.7e-44 181.0 101 80.2
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 4.7e-44 181.0 101 82.2
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 4.7e-44 181.0 101 80.2
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 4.7e-44 181.0 101 82.2
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 6.2e-44 180.6 101 82.2
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 6.2e-44 180.6 101 80.2
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 6.2e-44 180.6 101 80.2
C09p53180 Brassica napus HOM05D005643 ORTHO05D006819 6.2e-44 180.6 101 80.2
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 6.2e-44 180.6 101 80.2
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 6.2e-44 180.6 101 81.2
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 6.2e-44 180.6 101 80.2
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 8.1e-44 180.3 106 80.2
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 8.1e-44 180.3 101 79.2
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 8.1e-44 180.3 101 82.2
MD03G1113200 Malus domestica HOM05D005643 ORTHO05D006819 1.1e-43 179.9 118 76.3
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 1.4e-43 179.5 101 81.2
BcaC03g13961 Brassica carinata HOM05D005643 ORTHO05D006819 2.4e-43 178.7 101 80.2
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 2.4e-43 178.7 101 80.2
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 2.4e-43 178.7 101 80.2
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 2.4e-43 178.7 101 79.2
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 2.4e-43 178.7 103 83.5
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 2.4e-43 178.7 101 79.2
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 2.4e-43 178.7 101 80.2
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 2.4e-43 178.7 101 80.2
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 2.4e-43 178.7 101 80.2
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 3.1e-43 178.3 101 81.2
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 3.1e-43 178.3 101 82.2
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 3.1e-43 178.3 101 79.2
DCAR_006056 Daucus carota HOM05D005643 ORTHO05D006819 4.0e-43 177.9 101 81.2
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 5.2e-43 177.6 101 79.2
Zm00001eb208970 Zea mays HOM05D005643 ORTHO05D006819 3.4e-42 174.9 101 80.2
Os02g0130100 Oryza sativa ssp. japonica HOM05D005643 ORTHO05D006819 4.4e-42 174.5 101 79.2
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 7.6e-42 173.7 101 78.2
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 7.6e-42 173.7 101 79.2
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 1.1e-40 169.9 101 76.2
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 1.4e-40 169.5 101 77.2
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 2.4e-40 168.7 101 74.3
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 2.7e-39 165.2 91 82.4
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 7.8e-39 163.7 124 66.9
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 1.9e-37 159.1 101 74.3
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 2.5e-37 158.7 111 68.5
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 3.3e-37 158.3 101 77.2
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 9.6e-37 156.8 102 75.5
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 6.2e-36 154.1 101 71.3
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 2.4e-35 152.1 82 85.4
Pp3c19_5510 Physcomitrium patens HOM05D005643 ORTHO05D006819 4.0e-35 151.4 101 73.3
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 1.5e-34 149.4 101 69.3
CBR_g31179 Chara braunii HOM05D005643 ORTHO05D006819 1.1e-29 133.3 101 63.4
Cre03.g167051 Chlamydomonas reinhardtii HOM05D005643 ORTHO05D006819 3.6e-28 128.3 101 61.4
BraA02t05718Z Brassica rapa HOM05D005643 ORTHO05D006819 6.2e-28 127.5 67 85.1
Lj2A1030T57 Lonicera japonica HOM05D005643 ORTHO05D006819 1.8e-27 125.9 65 83.1
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 7.6e-26 120.6 95 62.1
Cpa.g.sc216.17 Carica papaya HOM05D005643 ORTHO05D006819 4.6e-23 111.3 57 84.2
MCO05G014 Micromonas commoda HOM05D005643 ORTHO05D006819 6.0e-23 110.9 102 57.8
Rhsim06G0101300 Rhododendron simsii HOM05D005643 ORTHO05D006819 6.7e-22 107.5 62 79.0
Cfa022863 Carpinus fangiana HOM05D005643 ORTHO05D006819 1.1e-19 100.1 103 47.6
SHI06095 Sapria himalayana HOM05D005643 ORTHO05D006819 2.4e-19 99.0 54 79.6
Oeu002855.1 Olea europaea HOM05D005643 ORTHO05D006819 6.7e-14 80.9 46 78.3
CiPaw.13G111500 Carya illinoinensis HOM05D005643 ORTHO05D006819 8.4e-09 63.9 38 76.3
Haze_23864 Corylus avellana HOM05D005643 ORTHO05D006819 1.9e-08 62.8 38 73.7
BcaC04g19711 Brassica carinata HOM05D005643 ORTHO05D006819 1.0e-06 57.0 26 92.3
SHI06096 Sapria himalayana HOM05D005643 ORTHO05D006819 1.3e-06 56.6 41 61.0


User provided reference genes

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