Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3411 Trochodendron aralioides HOM05D002908 ORTHO05D007390 1.6e-202 709.1 348 100.0
TAR624G0208 Trochodendron aralioides HOM05D002908 ORTHO05D007390 7.1e-174 614.0 347 87.0
MBI04_g14938_MAGBIO Magnolia biondii HOM05D002908 ORTHO05D007390 3.1e-161 572.0 350 80.9
Nn2g11662 Nelumbo nucifera HOM05D002908 ORTHO05D007390 1.1e-158 563.5 352 78.7
Dinv30470 Davidia involucrata HOM05D002908 ORTHO05D007390 2.3e-156 555.8 351 78.6
GSVIVG01017049001 Vitis vinifera HOM05D002908 ORTHO05D007390 1.1e-155 553.5 348 77.3
Aqoxy7G01537 Aquilegia oxysepala HOM05D002908 ORTHO05D007390 2.5e-155 552.4 350 76.6
vmacro18877 Vaccinium macrocarpon HOM05D002908 ORTHO05D007390 1.5e-152 543.1 349 75.9
Actinidia32717 Actinidia chinensis HOM05D002908 ORTHO05D007390 7.7e-152 540.8 348 77.0
CSS0023180 Camellia sinensis var. sinensis HOM05D002908 ORTHO05D007390 1.0e-151 540.4 325 81.2
Cc06_g20260 Coffea canephora HOM05D002908 ORTHO05D007390 1.7e-151 539.7 332 77.1
PSO566G0119 Papaver somniferum HOM05D002908 ORTHO05D007390 1.1e-150 537.0 348 75.6
MSTRG.4742 Avicennia marina HOM05D002908 ORTHO05D007390 1.9e-150 536.2 347 75.8
PSO782G2745 Papaver somniferum HOM05D002908 ORTHO05D007390 2.5e-150 535.8 348 75.3
Nitab4.5_0009963g0020 Nicotiana tabacum HOM05D002908 ORTHO05D007390 3.2e-150 535.4 353 74.2
Cfa002106 Carpinus fangiana HOM05D002908 ORTHO05D007390 7.2e-150 534.3 325 79.7
EL10Ac9g22051 Beta vulgaris HOM05D002908 ORTHO05D007390 1.6e-149 533.1 346 73.4
AUR62011685 Chenopodium quinoa HOM05D002908 ORTHO05D007390 2.7e-149 532.3 346 74.6
Ciclev10026026m.g Citrus clementina HOM05D002908 ORTHO05D007390 6.1e-149 531.2 327 78.9
Oeu000462.1 Olea europaea HOM05D002908 ORTHO05D007390 7.9e-149 530.8 347 75.2
MD09G1208200 Malus domestica HOM05D002908 ORTHO05D007390 2.3e-148 529.3 331 77.3
CANSAT56G3591 Cannabis sativa HOM05D002908 ORTHO05D007390 3.0e-148 528.9 334 77.5
Lsat_1_v5_gn_5_131021 Lactuca sativa HOM05D002908 ORTHO05D007390 5.1e-148 528.1 344 74.4
Thecc.06G094700 Theobroma cacao HOM05D002908 ORTHO05D007390 6.7e-148 527.7 337 76.3
ECA234G0421 Erigeron canadensis HOM05D002908 ORTHO05D007390 8.8e-148 527.3 342 75.7
HPP92_002914 Vanilla planifolia HOM05D002908 ORTHO05D007390 8.8e-148 527.3 350 74.9
HanXRQChr12g0360831 Helianthus annuus HOM05D002908 ORTHO05D007390 1.1e-147 526.9 341 75.4
Sc15g0002180 Simmondsia chinensis HOM05D002908 ORTHO05D007390 1.1e-147 526.9 338 76.0
TWI18G0563 Tripterygium wilfordii HOM05D002908 ORTHO05D007390 1.1e-147 526.9 322 79.8
HanXRQChr04g0096211 Helianthus annuus HOM05D002908 ORTHO05D007390 2.0e-147 526.2 347 76.1
MD17G1189500 Malus domestica HOM05D002908 ORTHO05D007390 2.0e-147 526.2 333 76.6
Potri.003G051500 Populus trichocarpa HOM05D002908 ORTHO05D007390 3.3e-147 525.4 332 76.8
Sopen06g024840 Solanum pennellii HOM05D002908 ORTHO05D007390 1.7e-146 523.1 354 72.6
Solyc06g066570.4 Solanum lycopersicum HOM05D002908 ORTHO05D007390 2.2e-146 522.7 354 72.6
CAN.G1152.12 Capsicum annuum HOM05D002908 ORTHO05D007390 3.7e-146 521.9 330 76.1
Migut.D01011 Erythranthe guttata HOM05D002908 ORTHO05D007390 4.8e-146 521.5 320 79.1
FvH4_6g31910 Fragaria vesca HOM05D002908 ORTHO05D007390 8.2e-146 520.8 343 75.8
FAN14G2394 Fragaria x ananassa HOM05D002908 ORTHO05D007390 8.2e-146 520.8 343 75.8
FAN02G4032 Fragaria x ananassa HOM05D002908 ORTHO05D007390 1.8e-145 519.6 340 75.9
PGSC0003DMG400016501 Solanum tuberosum HOM05D002908 ORTHO05D007390 1.8e-145 519.6 348 73.0
Peaxi162Scf00015g00145 Petunia axillaris HOM05D002908 ORTHO05D007390 2.4e-145 519.2 349 72.8
RcHm_v2.0_Chr2g0139271 Rosa chinensis HOM05D002908 ORTHO05D007390 2.4e-145 519.2 341 76.2
Potri.001G186000 Populus trichocarpa HOM05D002908 ORTHO05D007390 5.3e-145 518.1 341 75.1
Atru.chr1.3416 Acer truncatum HOM05D002908 ORTHO05D007390 6.9e-145 517.7 335 75.5
CDE05G0315 Ceratophyllum demersum HOM05D002908 ORTHO05D007390 6.9e-145 517.7 336 75.6
SGA_v2.0_scaffold68G22970 Striga asiatica HOM05D002908 ORTHO05D007390 6.9e-145 517.7 347 72.6
ClCG07G013190 Citrullus lanatus HOM05D002908 ORTHO05D007390 1.5e-144 516.5 318 78.9
Duzib235G0543 Durio zibethinus HOM05D002908 ORTHO05D007390 2.0e-144 516.2 338 74.6
Sed0011260 Sechium edule HOM05D002908 ORTHO05D007390 2.0e-144 516.2 318 78.9
arahy.Tifrunner.gnm1.ann1.E6TYPI Arachis hypogaea HOM05D002908 ORTHO05D007390 2.6e-144 515.8 335 75.5
Eucgr.J02953 Eucalyptus grandis HOM05D002908 ORTHO05D007390 3.4e-144 515.4 323 77.4
Manes.04G131100 Manihot esculenta HOM05D002908 ORTHO05D007390 3.4e-144 515.4 321 77.6
Nitab4.5_0000351g0020 Nicotiana tabacum HOM05D002908 ORTHO05D007390 5.9e-144 514.6 353 71.7
COL.COLO4_30459 Corchorus olitorius HOM05D002908 ORTHO05D007390 7.7e-144 514.2 341 73.3
arahy.Tifrunner.gnm1.ann1.0NGS5F Arachis hypogaea HOM05D002908 ORTHO05D007390 1.0e-143 513.8 323 76.8
Duzib192G0943 Durio zibethinus HOM05D002908 ORTHO05D007390 1.0e-143 513.8 340 72.9
FAN09G2740 Fragaria x ananassa HOM05D002908 ORTHO05D007390 1.0e-143 513.8 340 75.6
Actinidia21691 Actinidia chinensis HOM05D002908 ORTHO05D007390 1.3e-143 513.5 328 78.4
QL05p021375 Quercus lobata HOM05D002908 ORTHO05D007390 1.3e-143 513.5 345 73.9
Manes.11G036900 Manihot esculenta HOM05D002908 ORTHO05D007390 1.7e-143 513.1 327 76.1
VMungo0331G0294 Vigna mungo HOM05D002908 ORTHO05D007390 1.7e-143 513.1 325 77.8
Gorai.010G229600 Gossypium raimondii HOM05D002908 ORTHO05D007390 2.2e-143 512.7 337 74.2
CsaV3_3G023830 Cucumis sativus L. HOM05D002908 ORTHO05D007390 3.8e-143 511.9 317 78.5
Ca_11526_v3 Cicer arietinum L. HOM05D002908 ORTHO05D007390 5.0e-143 511.5 330 77.0
MELO3C012977.2 Cucumis melo HOM05D002908 ORTHO05D007390 6.5e-143 511.1 317 78.5
Glyma.08G203400 Glycine max HOM05D002908 ORTHO05D007390 8.5e-143 510.8 323 77.7
SGA_v2.0_scaffold4G02012 Striga asiatica HOM05D002908 ORTHO05D007390 1.1e-142 510.4 345 72.8
Lalb_Chr01g0013051 Lupinus albus HOM05D002908 ORTHO05D007390 1.4e-142 510.0 323 77.1
Phvul.010G147500 Phaseolus vulgaris HOM05D002908 ORTHO05D007390 1.4e-142 510.0 323 77.7
Os05g0275700 Oryza sativa ssp. japonica HOM05D002908 ORTHO05D007390 1.9e-142 509.6 340 73.8
Gorai.011G073300 Gossypium raimondii HOM05D002908 ORTHO05D007390 2.5e-142 509.2 329 75.1
PGR102G0394 Punica granatum HOM05D002908 ORTHO05D007390 2.5e-142 509.2 318 77.0
Medtr8g013660 Medicago truncatula HOM05D002908 ORTHO05D007390 3.2e-142 508.8 330 76.4
Glyma.07G018400 Glycine max HOM05D002908 ORTHO05D007390 9.4e-142 507.3 325 77.2
Sabra03G0027500 Salix brachista HOM05D002908 ORTHO05D007390 6.1e-141 504.6 359 70.5
TPR.G14821 Trifolium pratense HOM05D002908 ORTHO05D007390 1.0e-140 503.8 330 75.5
Hund00658 Selenicereus undatus HOM05D002908 ORTHO05D007390 2.0e-139 499.6 345 70.1
THA.LOC104813553 Tarenaya hassleriana HOM05D002908 ORTHO05D007390 9.7e-139 497.3 322 73.6
Sp5g35950 Schrenkiella parvula HOM05D002908 ORTHO05D007390 9.1e-137 490.7 319 73.7
CARHR074760 Cardamine hirsuta HOM05D002908 ORTHO05D007390 2.0e-136 489.6 319 74.0
Rhsim08G0224800 Rhododendron simsii HOM05D002908 ORTHO05D007390 2.0e-136 489.6 348 72.1
AT1G79810 Arabidopsis thaliana HOM05D002908 ORTHO05D007390 5.9e-136 488.0 321 73.2
Carub.0002s2769 Capsella rubella HOM05D002908 ORTHO05D007390 2.2e-135 486.1 319 74.0
AL2G41740 Arabidopsis lyrata HOM05D002908 ORTHO05D007390 3.8e-135 485.3 319 73.7
Thhalv10018845m.g Eutrema salsugineum HOM05D002908 ORTHO05D007390 1.1e-134 483.8 320 73.1
Lj5C318G10 Lonicera japonica HOM05D002908 ORTHO05D007390 1.1e-134 483.8 309 79.3
A07p26340 Brassica napus HOM05D002908 ORTHO05D007390 7.2e-134 481.1 320 72.5
BraA07t30278Z Brassica rapa HOM05D002908 ORTHO05D007390 7.2e-134 481.1 320 72.5
AUR62016511 Chenopodium quinoa HOM05D002908 ORTHO05D007390 1.2e-133 480.3 303 77.6
C06p28730 Brassica napus HOM05D002908 ORTHO05D007390 1.6e-133 479.9 317 72.9
BolC6t38042H Brassica oleracea HOM05D002908 ORTHO05D007390 3.0e-132 475.7 320 71.9
ATR0315G165 Amborella trichopoda HOM05D002908 ORTHO05D007390 4.0e-132 475.3 325 71.4
unitig_736.g22790 Utricularia gibba HOM05D002908 ORTHO05D007390 5.7e-131 471.5 349 67.3
Hund06642 Selenicereus undatus HOM05D002908 ORTHO05D007390 1.3e-130 470.3 301 77.4
Haze_16343 Corylus avellana HOM05D002908 ORTHO05D007390 1.1e-129 467.2 322 74.2
Zm00001eb031430 Zea mays HOM05D002908 ORTHO05D007390 3.1e-129 465.7 287 78.0
Aa31LG4G20 Aethionema arabicum HOM05D002908 ORTHO05D007390 7.0e-129 464.5 353 64.3
Lj3g0013088 Lotus japonicus HOM05D002908 ORTHO05D007390 5.7e-123 444.9 291 75.3
DCAR_026336 Daucus carota HOM05D002908 ORTHO05D007390 3.1e-121 439.1 352 65.3
Sabra01G0154100 Salix brachista HOM05D002908 ORTHO05D007390 1.6e-120 436.8 328 70.1
SalBow7G1474 Salvia bowleyana HOM05D002908 ORTHO05D007390 2.7e-120 436.0 363 63.9
Prupe.3G064400 Prunus persica HOM05D002908 ORTHO05D007390 8.0e-117 424.5 255 78.8
Gohir.A06G188700 Gossypium hirsutum HOM05D002908 ORTHO05D007390 1.4e-116 423.7 263 76.4
Gohir.D06G197300 Gossypium hirsutum HOM05D002908 ORTHO05D007390 4.0e-116 422.2 263 76.0
Lsat_1_v5_gn_1_35361 Lactuca sativa HOM05D002908 ORTHO05D007390 4.4e-115 418.7 294 72.8
CiPaw.02G148100 Carya illinoinensis HOM05D002908 ORTHO05D007390 2.0e-112 409.8 265 75.1
Gohir.D10G068700 Gossypium hirsutum HOM05D002908 ORTHO05D007390 1.3e-106 390.6 263 71.5
Mapoly0052s0120 Marchantia polymorpha HOM05D002908 ORTHO05D007390 5.4e-105 385.2 330 57.9
Pp3c3_18540 Physcomitrium patens HOM05D002908 ORTHO05D007390 6.6e-103 378.3 328 57.0
CiPaw.01G234600 Carya illinoinensis HOM05D002908 ORTHO05D007390 1.0e-100 370.9 233 77.3
Dinv38008 Davidia involucrata HOM05D002908 ORTHO05D007390 4.0e-100 369.0 227 81.1
SMO146G0339 Selaginella moellendorffii HOM05D002908 ORTHO05D007390 1.5e-94 350.5 314 56.7
CBR_g960 Chara braunii HOM05D002908 ORTHO05D007390 5.6e-78 295.4 347 47.8
SEGI_14821 Sequoiadendron giganteum HOM05D002908 ORTHO05D007390 3.1e-76 289.7 221 62.0
Cpa.g.sc109.47 Carica papaya HOM05D002908 ORTHO05D007390 1.3e-71 274.2 207 69.6
Lalb_Chr25g0280041 Lupinus albus HOM05D002908 ORTHO05D007390 1.3e-69 267.7 274 55.1
Gohir.A10G083732 Gossypium hirsutum HOM05D002908 ORTHO05D007390 2.6e-67 260.0 179 72.1
Psat4g199400 Pisum sativum HOM05D002908 ORTHO05D007390 4.8e-61 239.2 145 78.6
AagrBONN_evm.TU.Sc2ySwM_228.2361 Anthoceros agrestis HOM05D002908 ORTHO05D007390 1.4e-60 237.7 209 57.4
PGSC0003DMG400002631 Solanum tuberosum HOM05D002908 ORTHO05D007390 9.0e-52 208.4 323 44.9
Sed0019299 Sechium edule HOM05D002908 ORTHO05D007390 3.4e-51 206.5 206 56.8
MCO16G131 Micromonas commoda HOM05D002908 ORTHO05D007390 2.5e-49 200.3 322 36.3
Solyc03g120520.2 Solanum lycopersicum HOM05D002908 ORTHO05D007390 1.6e-45 187.6 242 42.6
Cre17.g698800 Chlamydomonas reinhardtii HOM05D002908 ORTHO05D007390 2.2e-42 177.2 399 31.6
Lsat_1_v5_gn_1_85060 Lactuca sativa HOM05D002908 ORTHO05D007390 2.9e-42 176.8 200 49.5
SEGI_00949 Sequoiadendron giganteum HOM05D002908 ORTHO05D007390 1.4e-41 174.5 131 67.2
CAN.G438.36 Capsicum annuum HOM05D002908 ORTHO05D007390 1.0e-39 168.3 114 71.9
Lj5C56G8 Lonicera japonica HOM05D002908 ORTHO05D007390 1.5e-35 154.5 231 46.8
PRCOL_00006980 Prasinoderma coloniale HOM05D000198 ORTHO05D003232 5.9e-35 152.5 318 34.0
Rhsim02G0192800 Rhododendron simsii HOM05D002908 ORTHO05D004240 8.8e-23 112.1 71 77.5
Medtr7g090350 Medicago truncatula HOM05D002908 ORTHO05D007390 1.9e-17 94.4 250 32.8
Sopen00g008760 Solanum pennellii HOM05D002908 ORTHO05D007390 3.2e-17 93.6 98 50.0
Lsat_1_v5_gn_3_20480 Lactuca sativa HOM05D001398 ORTHO05D011740 1.8e-15 87.8 78 56.4
Rhsim12G0105800 Rhododendron simsii HOM05D002908 ORTHO05D340239 1.3e-10 71.6 55 67.3
Nn3g18125 Nelumbo nucifera HOM05D002908 ORTHO05D007390 1.6e-08 64.7 41 80.5
Rhsim03G0241200 Rhododendron simsii HOM05D002908 ORTHO05D050692 1.6e-08 64.7 43 69.8
Nitab4.5_0016721g0010 Nicotiana tabacum HOM05D002908 ORTHO05D283189 1.0e-07 62.0 82 51.2


User provided reference genes

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