Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 6.1e-151 537.7 326 100.0
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 4.8e-55 219.2 341 43.4
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 2.6e-53 213.4 315 46.7
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 3.8e-52 209.5 337 43.0
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 3.8e-52 209.5 375 38.9
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 8.4e-52 208.4 313 46.3
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 1.0e-49 201.4 299 44.1
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 6.7e-49 198.7 302 43.0
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 7.4e-48 195.3 321 41.7
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 2.8e-47 193.4 314 44.9
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 1.1e-46 191.4 345 38.8
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 1.8e-46 190.7 318 39.6
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 4.1e-46 189.5 318 39.3
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 1.5e-45 187.6 317 39.4
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 2.0e-45 187.2 336 43.2
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 3.4e-45 186.4 358 45.8
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 2.2e-44 183.7 332 41.6
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.4e-43 181.0 296 40.9
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 5.5e-43 179.1 313 42.2
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 7.2e-43 178.7 165 62.4
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 6.1e-42 175.6 368 39.7
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 2.5e-40 170.2 378 35.4
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 7.4e-40 168.7 344 38.7
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 1.3e-39 167.9 274 44.2
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 3.7e-39 166.4 340 38.5
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 6.3e-39 165.6 388 37.4
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 1.4e-38 164.5 338 37.0
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 2.4e-38 163.7 341 37.8
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 4.1e-38 162.9 311 37.9
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 5.3e-38 162.5 376 37.5
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 6.9e-38 162.2 316 39.2
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 3.8e-36 156.4 292 39.0
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 3.8e-36 156.4 281 38.4
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 8.5e-36 155.2 369 39.8
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 7.2e-35 152.1 307 37.8
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 9.4e-35 151.8 313 35.8
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 1.8e-33 147.5 270 38.9
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 1.8e-33 147.5 330 34.8
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 3.0e-33 146.7 330 35.2
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 5.1e-33 146.0 329 35.6
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 7.4e-32 142.1 233 41.6
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 9.7e-32 141.7 345 29.9
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 9.7e-32 141.7 293 34.5
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 9.7e-32 141.7 331 37.2
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 2.8e-31 140.2 316 36.7
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 4.8e-31 139.4 342 33.9
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 2.4e-30 137.1 312 37.2
QL04p005379 Quercus lobata HOM05D000011 ORTHO05D007876 7.0e-30 135.6 266 36.8
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 7.0e-30 135.6 300 35.0
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 2.6e-29 133.7 273 38.1
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 1.3e-28 131.3 321 34.0
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 3.8e-28 129.8 330 43.6
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 5.0e-28 129.4 199 45.2
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 6.5e-28 129.0 374 31.0
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 6.5e-28 129.0 369 30.6
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 8.5e-28 128.6 288 35.4
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 1.1e-27 128.3 314 37.3
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 1.4e-27 127.9 277 35.4
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 4.2e-27 126.3 276 36.6
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 4.2e-27 126.3 288 38.2
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 7.2e-27 125.6 374 31.6
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 1.2e-26 124.8 165 47.9
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 1.6e-26 124.4 273 35.2
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 4.7e-26 122.9 271 36.2
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 3.0e-25 120.2 278 34.2
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 8.8e-25 118.6 229 38.0
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 5.7e-24 115.9 151 48.3
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 7.4e-24 115.5 288 43.8
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 4.8e-23 112.8 89 66.3
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 9.1e-22 108.6 286 42.7
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 3.5e-21 106.7 162 45.1
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 3.5e-21 106.7 162 45.1
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 5.9e-21 105.9 337 32.9
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 1.0e-20 105.1 151 45.7
PSO210G6643 Papaver somniferum HOM05D006280 ORTHO05D007876 1.0e-20 105.1 158 45.6
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 1.7e-20 104.4 337 32.9
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 6.5e-20 102.4 151 45.0
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 6.5e-20 102.4 151 45.0
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 8.5e-20 102.1 156 45.5
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 1.9e-19 100.9 351 37.6
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 3.2e-19 100.1 277 31.8
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 1.6e-18 97.8 83 61.4
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 3.6e-18 96.7 348 37.4
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 6.7e-17 92.4 318 30.2
Manes.07G004300 Manihot esculenta HOM05D006280 ORTHO05D007876 6.7e-17 92.4 240 33.8
QL04p005302 Quercus lobata HOM05D006280 ORTHO05D007876 3.3e-16 90.1 231 35.5
MSTRG.5009 Avicennia marina HOM05D006280 ORTHO05D007876 3.1e-14 83.6 247 32.4
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 5.3e-14 82.8 151 41.1
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 5.3e-14 82.8 275 31.6
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.6e-13 81.3 233 44.6
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 5.0e-12 76.3 237 28.7
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 8.5e-12 75.5 255 30.6
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 1.5e-11 74.7 159 35.8
HPP92_006144 Vanilla planifolia HOM05D002569 ORTHO05D006728 7.2e-11 72.4 162 34.0
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 9.4e-11 72.0 148 41.9
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 9.4e-11 72.0 156 35.3
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 1.2e-10 71.6 171 31.6
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 2.1e-10 70.9 166 36.1
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 6.1e-10 69.3 151 39.7
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 6.1e-10 69.3 179 36.9
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 2.3e-09 67.4 82 47.6
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 2.3e-09 67.4 151 39.7
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 5.2e-09 66.2 142 37.3
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 3.4e-08 63.5 153 34.0
DCAR_006240 Daucus carota HOM05D006280 ORTHO05D007876 9.8e-08 62.0 208 29.8
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 2.8e-07 60.5 142 32.4
QL04p005401 Quercus lobata HOM05D000011 ORTHO05D000157 7.0e-06 55.8 96 36.5


User provided reference genes

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