Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2555 Trochodendron aralioides HOM05D005876 ORTHO05D007326 1.3e-62 243.0 141 100.0
TAR375G0626 Trochodendron aralioides HOM05D005876 ORTHO05D007326 2.5e-29 132.5 124 64.5
TAR633G1288 Trochodendron aralioides HOM05D005876 ORTHO05D007326 3.1e-27 125.6 116 62.9
Duzib093G1198 Durio zibethinus HOM05D005876 ORTHO05D007326 7.2e-16 87.8 122 45.9
CiPaw.09G179800 Carya illinoinensis HOM05D005876 ORTHO05D007326 2.7e-15 85.9 124 48.4
Haze_20644 Corylus avellana HOM05D005876 ORTHO05D007326 3.6e-15 85.5 123 48.8
Cfa017510 Carpinus fangiana HOM05D000666 ORTHO05D001727 4.7e-15 85.1 123 48.8
CSS0011524 Camellia sinensis var. sinensis HOM05D005876 ORTHO05D007326 1.4e-14 83.6 116 48.3
Nn2g10678 Nelumbo nucifera HOM05D005876 ORTHO05D007326 2.3e-14 82.8 119 55.5
PSO063G0740 Papaver somniferum HOM05D005876 ORTHO05D007326 2.3e-14 82.8 117 46.2
PSO063G1014 Papaver somniferum HOM05D005876 ORTHO05D007326 2.3e-14 82.8 117 46.2
GSVIVG01025628001 Vitis vinifera HOM05D005876 ORTHO05D007326 3.0e-14 82.4 125 47.2
Ciclev10012269m.g Citrus clementina HOM05D005876 ORTHO05D007326 3.9e-14 82.0 122 48.4
Atru.chr8.2559 Acer truncatum HOM05D005876 ORTHO05D007326 6.7e-14 81.3 117 46.2
TWI74G1051 Tripterygium wilfordii HOM05D005876 ORTHO05D007326 1.1e-13 80.5 118 44.9
Actinidia13103 Actinidia chinensis HOM05D005876 ORTHO05D007326 2.6e-13 79.3 123 45.5
Dinv37257 Davidia involucrata HOM05D005876 ORTHO05D007326 3.3e-13 79.0 122 45.1
Gohir.A01G216800 Gossypium hirsutum HOM05D005876 ORTHO05D007326 1.3e-12 77.0 119 48.7
Thecc.05G054500 Theobroma cacao HOM05D005876 ORTHO05D007326 1.7e-12 76.6 118 45.8
Gorai.002G249900 Gossypium raimondii HOM05D005876 ORTHO05D007326 8.2e-12 74.3 117 47.0
FAN02G3306 Fragaria x ananassa HOM05D005876 ORTHO05D007326 1.1e-11 73.9 111 45.9
MBI19_g11838_MAGBIO Magnolia biondii HOM05D005876 ORTHO05D007326 1.4e-11 73.6 122 48.4
Gohir.D01G205600 Gossypium hirsutum HOM05D005876 ORTHO05D007326 7.0e-11 71.2 108 46.3
FvH4_6g15400 Fragaria vesca HOM05D005876 ORTHO05D007326 9.1e-11 70.9 111 42.3
FAN09G4005 Fragaria x ananassa HOM05D005876 ORTHO05D007326 9.1e-11 70.9 114 43.9
FAN14G3435 Fragaria x ananassa HOM05D005876 ORTHO05D007326 1.6e-10 70.1 111 42.3
RcHm_v2.0_Chr3g0468881 Rosa chinensis HOM05D005876 ORTHO05D007326 1.6e-10 70.1 113 44.2
Solyc09g007370.4 Solanum lycopersicum HOM05D005876 ORTHO05D007326 1.6e-10 70.1 118 40.7
Sopen09g002270 Solanum pennellii HOM05D005876 ORTHO05D007326 1.6e-10 70.1 118 40.7
PGSC0003DMG400001766 Solanum tuberosum HOM05D005876 ORTHO05D007326 7.7e-10 67.8 118 39.8
Hma1.2p1_0350F.1_g132760 Hydrangea macrophylla HOM05D005876 ORTHO05D007326 2.9e-09 65.9 130 40.8
Prupe.4G230000 Prunus persica HOM05D005876 ORTHO05D007326 2.9e-09 65.9 118 42.4
SGA_v2.0_scaffold75G24879 Striga asiatica HOM05D005876 ORTHO05D007326 2.9e-09 65.9 124 33.9
CANSAT80G1885 Cannabis sativa HOM05D005876 ORTHO05D007326 6.5e-09 64.7 116 42.2
Migut.J00418 Erythranthe guttata HOM05D005876 ORTHO05D007326 6.5e-09 64.7 119 37.8
COL.COLO4_06720 Corchorus olitorius HOM05D005876 ORTHO05D007326 8.5e-09 64.3 118 43.2
MSTRG.5723 Avicennia marina HOM05D005876 ORTHO05D007326 1.1e-08 63.9 115 40.9
VMungo1215G0672 Vigna mungo HOM05D005876 ORTHO05D007326 1.1e-08 63.9 120 42.5
Lj2C107T12 Lonicera japonica HOM05D005876 ORTHO05D007326 2.5e-08 62.8 122 38.5
Oeu060085.1 Olea europaea HOM05D005876 ORTHO05D007326 3.2e-08 62.4 110 36.4
Cpa.g.sc45.33 Carica papaya HOM05D005876 ORTHO05D007326 9.4e-08 60.8 121 35.5
Glyma.11G012100 Glycine max HOM05D005876 ORTHO05D007326 9.4e-08 60.8 108 43.5
Potri.001G033900 Populus trichocarpa HOM05D005876 ORTHO05D007326 2.1e-07 59.7 121 48.8
CAN.G1676.1 Capsicum annuum HOM05D005876 ORTHO05D007326 6.1e-07 58.2 109 41.3
Manes.09G081419 Manihot esculenta HOM05D005876 ORTHO05D007326 6.1e-07 58.2 113 46.9
Sabra01G0024100 Salix brachista HOM05D001063 ORTHO05D000986 1.4e-06 57.0 133 43.6
MD12G1123900 Malus domestica HOM05D005876 ORTHO05D007326 2.3e-06 56.2 122 36.9
QL07p024280 Quercus lobata HOM05D005876 ORTHO05D007326 2.3e-06 56.2 122 36.1
QL03p054300 Quercus lobata HOM05D005876 ORTHO05D007326 3.0e-06 55.8 122 36.1
SalBow3G2410 Salvia bowleyana HOM05D005876 ORTHO05D007326 3.0e-06 55.8 114 35.1
SalBow3G3945 Salvia bowleyana HOM05D005876 ORTHO05D007326 3.0e-06 55.8 114 35.1
Phvul.002G038100 Phaseolus vulgaris HOM05D005876 ORTHO05D007326 4.0e-06 55.5 105 40.0
Duzib106G1607 Durio zibethinus HOM05D005876 ORTHO05D007326 5.2e-06 55.1 109 36.7
Nitab4.5_0002614g0010 Nicotiana tabacum HOM05D005876 ORTHO05D007326 5.2e-06 55.1 113 44.2


User provided reference genes

Program Settings