Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2200 Trochodendron aralioides HOM05D001389 ORTHO05D002892 5.1e-60 234.2 115 100.0
Nn7g38413 Nelumbo nucifera HOM05D001389 ORTHO05D002892 1.6e-13 79.7 43 83.7
TAR626G0305 Trochodendron aralioides HOM05D001389 ORTHO05D002892 2.7e-13 79.0 43 83.7
Medtr8g447080 Medicago truncatula HOM05D001389 ORTHO05D002892 6.1e-13 77.8 64 62.5
Peaxi162Scf00286g00445 Petunia axillaris HOM05D001389 ORTHO05D002892 6.1e-13 77.8 66 59.1
VMungo1127G2030 Vigna mungo HOM05D001389 ORTHO05D002892 6.1e-13 77.8 64 62.5
Duzib268G1402 Durio zibethinus HOM05D001389 ORTHO05D002892 1.4e-12 76.6 43 76.7
Lj3g0008765 Lotus japonicus HOM05D001389 ORTHO05D002892 1.4e-12 76.6 64 60.9
Nitab4.5_0006630g0010 Nicotiana tabacum HOM05D001389 ORTHO05D002892 1.4e-12 76.6 43 81.4
Nitab4.5_0017314g0010 Nicotiana tabacum HOM05D001389 ORTHO05D002892 1.4e-12 76.6 43 81.4
Thecc.07G189400 Theobroma cacao HOM05D001389 ORTHO05D002892 1.4e-12 76.6 43 79.1
TWI38G1380 Tripterygium wilfordii HOM05D001389 ORTHO05D002892 1.4e-12 76.6 42 81.0
TWI38G1819 Tripterygium wilfordii HOM05D001389 ORTHO05D002892 1.4e-12 76.6 42 81.0
CiPaw.15G111800 Carya illinoinensis HOM05D001389 ORTHO05D002892 1.8e-12 76.3 42 83.3
Lalb_Chr03g0031961 Lupinus albus HOM05D001389 ORTHO05D002892 2.3e-12 75.9 63 60.3
PSO063G3640 Papaver somniferum HOM05D001389 ORTHO05D002892 3.9e-12 75.1 65 56.9
PSO170G2397 Papaver somniferum HOM05D001389 ORTHO05D002892 3.9e-12 75.1 65 56.9
PSO017G2219 Papaver somniferum HOM05D001389 ORTHO05D002892 5.1e-12 74.7 65 56.9
RcHm_v2.0_Chr5g0023141 Rosa chinensis HOM05D001389 ORTHO05D002892 5.1e-12 74.7 41 85.4
Ca_22975_v3 Cicer arietinum L. HOM05D001389 ORTHO05D002892 1.1e-11 73.6 62 59.7
Glyma.08G233500 Glycine max HOM05D001389 ORTHO05D002892 1.5e-11 73.2 63 58.7
PSO210G2469 Papaver somniferum HOM05D001389 ORTHO05D002892 1.5e-11 73.2 43 74.4
Prupe.4G126000 Prunus persica HOM05D001389 ORTHO05D002892 1.5e-11 73.2 41 80.5
TPR.G30142 Trifolium pratense HOM05D001389 ORTHO05D002892 1.5e-11 73.2 64 57.8
Cfa017766 Carpinus fangiana HOM05D001389 ORTHO05D002892 2.0e-11 72.8 43 74.4
FvH4_3g13930 Fragaria vesca HOM05D001389 ORTHO05D002892 2.0e-11 72.8 41 82.9
FAN11G0792 Fragaria x ananassa HOM05D001389 ORTHO05D002892 2.0e-11 72.8 41 82.9
FAN16G0794 Fragaria x ananassa HOM05D001389 ORTHO05D002892 2.0e-11 72.8 41 82.9
FAN25G2511 Fragaria x ananassa HOM05D001389 ORTHO05D002892 2.0e-11 72.8 41 82.9
Lsat_1_v5_gn_1_86281 Lactuca sativa HOM05D001389 ORTHO05D002892 2.0e-11 72.8 63 55.6
Sed0007782 Sechium edule HOM05D001389 ORTHO05D002892 2.0e-11 72.8 43 76.7
Haze_18484 Corylus avellana HOM05D001389 ORTHO05D002892 2.5e-11 72.4 41 78.0
MBI18_g37375_MAGBIO Magnolia biondii HOM05D001389 ORTHO05D002892 2.5e-11 72.4 67 56.7
CAN.G710.30 Capsicum annuum HOM05D001389 ORTHO05D002892 3.3e-11 72.0 45 82.2
CDE01G0582 Ceratophyllum demersum HOM05D001389 ORTHO05D002892 3.3e-11 72.0 65 60.0
Ciclev10006644m.g Citrus clementina HOM05D001389 ORTHO05D002892 3.3e-11 72.0 42 73.8
FAN21G0824 Fragaria x ananassa HOM05D001389 ORTHO05D002892 3.3e-11 72.0 41 82.9
MD10G1218100 Malus domestica HOM05D001389 ORTHO05D002892 3.3e-11 72.0 43 76.7
SGA_v2.0_scaffold7G03632 Striga asiatica HOM05D001389 ORTHO05D002892 3.3e-11 72.0 67 55.2
THA.LOC104812396 Tarenaya hassleriana HOM05D001389 ORTHO05D002892 3.3e-11 72.0 43 74.4
CARHR072980 Cardamine hirsuta HOM05D001389 ORTHO05D002892 4.3e-11 71.6 64 54.7
Potri.008G081100 Populus trichocarpa HOM05D001389 ORTHO05D002892 4.3e-11 71.6 42 73.8
Potri.010G175000 Populus trichocarpa HOM05D001389 ORTHO05D002892 4.3e-11 71.6 42 78.6
Sc02g0005340 Simmondsia chinensis HOM05D001389 ORTHO05D002892 4.3e-11 71.6 43 76.7
Atru.chr1.21 Acer truncatum HOM05D001389 ORTHO05D002892 5.7e-11 71.2 41 78.0
CDE12G0651 Ceratophyllum demersum HOM05D001389 ORTHO05D002892 5.7e-11 71.2 65 60.0
Sabra08G0060400 Salix brachista HOM05D001389 ORTHO05D002892 5.7e-11 71.2 42 73.8
Sp5g34390 Schrenkiella parvula HOM05D001389 ORTHO05D002892 5.7e-11 71.2 64 54.7
Actinidia03632 Actinidia chinensis HOM05D001389 ORTHO05D002892 7.4e-11 70.9 43 76.7
Carub.0002s2616 Capsella rubella HOM05D001389 ORTHO05D002892 7.4e-11 70.9 53 60.4
HanXRQChr16g0520371 Helianthus annuus HOM05D001389 ORTHO05D002892 7.4e-11 70.9 62 54.8
PSO210G7753 Papaver somniferum HOM05D001389 ORTHO05D002892 7.4e-11 70.9 43 72.1
Rhsim04G0003600 Rhododendron simsii HOM05D001389 ORTHO05D002892 7.4e-11 70.9 48 72.9
Glyma.15G219100 Glycine max HOM05D001389 ORTHO05D002892 9.7e-11 70.5 63 57.1
Phvul.011G180300 Phaseolus vulgaris HOM05D001389 ORTHO05D002892 9.7e-11 70.5 64 59.4
Carub.0002s2619 Capsella rubella HOM05D001389 ORTHO05D002892 1.3e-10 70.1 64 54.7
AUR62025205 Chenopodium quinoa HOM05D001389 ORTHO05D002892 1.3e-10 70.1 41 73.2
AUR62028968 Chenopodium quinoa HOM05D001389 ORTHO05D002892 1.3e-10 70.1 41 73.2
Manes.16G048900 Manihot esculenta HOM05D001389 ORTHO05D002892 1.3e-10 70.1 42 73.8
Sabra10G0134800 Salix brachista HOM05D001389 ORTHO05D002892 1.3e-10 70.1 42 76.2
vmacro09763 Vaccinium macrocarpon HOM05D001389 ORTHO05D002892 1.3e-10 70.1 48 70.8
Ah.09g231460 Amaranthus hybridus HOM05D001389 ORTHO05D002892 1.7e-10 69.7 41 75.6
CSS0030714 Camellia sinensis var. sinensis HOM05D001389 ORTHO05D002892 1.7e-10 69.7 46 71.7
Eucgr.F04472 Eucalyptus grandis HOM05D001389 ORTHO05D002892 1.7e-10 69.7 41 75.6
Hma1.2p1_0754F.1_g213040 Hydrangea macrophylla HOM05D001389 ORTHO05D002892 1.7e-10 69.7 39 82.1
Sopen09g036100 Solanum pennellii HOM05D001389 ORTHO05D002892 1.7e-10 69.7 43 74.4
PGSC0003DMG400011909 Solanum tuberosum HOM05D001389 ORTHO05D002892 1.7e-10 69.7 43 74.4
Ah.14g084960 Amaranthus hybridus HOM05D001389 ORTHO05D002892 2.2e-10 69.3 41 75.6
Aqoxy1G01381 Aquilegia oxysepala HOM05D001389 ORTHO05D002892 2.2e-10 69.3 43 69.8
BcaB02g08680 Brassica carinata HOM05D001389 ORTHO05D002892 2.2e-10 69.3 69 47.8
BcaB05g25193 Brassica carinata HOM05D001389 ORTHO05D002892 2.2e-10 69.3 64 53.1
BcaC03g15884 Brassica carinata HOM05D001389 ORTHO05D002892 2.2e-10 69.3 64 53.1
BcaC08g47494 Brassica carinata HOM05D001389 ORTHO05D002892 2.2e-10 69.3 69 47.8
A07p44420 Brassica napus HOM05D001389 ORTHO05D002892 2.2e-10 69.3 69 47.8
C02p36520 Brassica napus HOM05D001389 ORTHO05D002892 2.2e-10 69.3 64 53.1
C06p53230 Brassica napus HOM05D001389 ORTHO05D002892 2.2e-10 69.3 69 47.8
BolC2t09651H Brassica oleracea HOM05D001389 ORTHO05D002892 2.2e-10 69.3 64 53.1
BolC6t40341H Brassica oleracea HOM05D001389 ORTHO05D002892 2.2e-10 69.3 69 47.8
BraA02t07277Z Brassica rapa HOM05D001389 ORTHO05D002892 2.2e-10 69.3 64 53.1
BraA07t31951Z Brassica rapa HOM05D001389 ORTHO05D002892 2.2e-10 69.3 69 47.8
CARHR073000 Cardamine hirsuta HOM05D001389 ORTHO05D002892 2.2e-10 69.3 42 71.4
MELO3C013563.2 Cucumis melo HOM05D001389 ORTHO05D002892 2.2e-10 69.3 40 75.0
Solyc09g098150.3 Solanum lycopersicum HOM05D001389 ORTHO05D002892 2.2e-10 69.3 43 72.1
GSVIVG01036702001 Vitis vinifera HOM05D001389 ORTHO05D002892 2.2e-10 69.3 51 62.7
CANSAT56G0756 Cannabis sativa HOM05D001389 ORTHO05D002892 2.8e-10 68.9 43 79.1
Glyma.08G233300 Glycine max HOM05D001389 ORTHO05D002892 2.8e-10 68.9 62 56.5
PGR031G3914 Punica granatum HOM05D001389 ORTHO05D002892 2.8e-10 68.9 42 73.8
AL2G39900 Arabidopsis lyrata HOM05D001389 ORTHO05D002892 3.7e-10 68.6 68 50.0
AT1G79330 Arabidopsis thaliana HOM05D001389 ORTHO05D002892 3.7e-10 68.6 64 54.7
COL.COLO4_25002 Corchorus olitorius HOM05D001389 ORTHO05D002892 3.7e-10 68.6 47 72.3
Sp5g34400 Schrenkiella parvula HOM05D001389 ORTHO05D002892 3.7e-10 68.6 42 71.4
AL2G39950 Arabidopsis lyrata HOM05D001389 ORTHO05D002892 4.8e-10 68.2 41 73.2
AT1G79340 Arabidopsis thaliana HOM05D001389 ORTHO05D002892 4.8e-10 68.2 41 73.2
EL10Ac8g19097 Beta vulgaris HOM05D001389 ORTHO05D002892 4.8e-10 68.2 43 74.4
Carub.0002s2620 Capsella rubella HOM05D001389 ORTHO05D002892 4.8e-10 68.2 41 73.2
VMungo1127G0819 Vigna mungo HOM05D001389 ORTHO05D002892 4.8e-10 68.2 41 75.6
A02p22750 Brassica napus HOM05D001389 ORTHO05D002892 6.3e-10 67.8 64 51.6
Thhalv10018618m.g Eutrema salsugineum HOM05D001389 ORTHO05D002892 6.3e-10 67.8 66 50.0
CsaV3_6G012630 Cucumis sativus L. HOM05D001389 ORTHO05D002892 8.2e-10 67.4 59 59.3
DCAR_019907 Daucus carota HOM05D001389 ORTHO05D002892 8.2e-10 67.4 43 69.8
THA.LOC104808147 Tarenaya hassleriana HOM05D001389 ORTHO05D002892 8.2e-10 67.4 54 59.3
Aa31LG4G1690 Aethionema arabicum HOM05D001389 ORTHO05D002892 1.1e-09 67.0 44 63.6
ATR0794G112 Amborella trichopoda HOM05D001389 ORTHO05D002892 1.1e-09 67.0 43 74.4
MSTRG.7099 Avicennia marina HOM05D001389 ORTHO05D002892 1.1e-09 67.0 46 69.6
ClCG02G011200 Citrullus lanatus HOM05D001389 ORTHO05D002892 1.1e-09 67.0 40 72.5
Cc07_g20600 Coffea canephora HOM05D001389 ORTHO05D002892 1.1e-09 67.0 43 72.1
ECA234G1641 Erigeron canadensis HOM05D001389 ORTHO05D002892 1.4e-09 66.6 64 51.6
Migut.M01495 Erythranthe guttata HOM05D001389 ORTHO05D002892 1.4e-09 66.6 43 69.8
Phvul.011G180200 Phaseolus vulgaris HOM05D001389 ORTHO05D002892 1.4e-09 66.6 41 73.2
Hund12038 Selenicereus undatus HOM05D001389 ORTHO05D002892 1.4e-09 66.6 43 72.1
CARHR072960 Cardamine hirsuta HOM05D001389 ORTHO05D002892 1.8e-09 66.2 45 62.2
Cpa.g.sc32.144 Carica papaya HOM05D001389 ORTHO05D002892 2.4e-09 65.9 43 67.4
Thhalv10018629m.g Eutrema salsugineum HOM05D001389 ORTHO05D002892 2.4e-09 65.9 63 52.4
Gohir.A13G126850 Gossypium hirsutum HOM05D001389 ORTHO05D002892 2.4e-09 65.9 45 68.9
Gohir.D13G130500 Gossypium hirsutum HOM05D001389 ORTHO05D002892 2.4e-09 65.9 45 68.9
Gorai.013G146600 Gossypium raimondii HOM05D001389 ORTHO05D002892 2.4e-09 65.9 45 68.9
Oeu025994.1 Olea europaea HOM05D001389 ORTHO05D002892 2.4e-09 65.9 46 65.2
Psat0s11g0160 Pisum sativum HOM05D001389 ORTHO05D002892 2.4e-09 65.9 63 49.2
SEGI_02619 Sequoiadendron giganteum HOM05D001389 ORTHO05D002892 2.4e-09 65.9 91 42.9
Carub.0002s2618 Capsella rubella HOM05D001389 ORTHO05D002892 3.1e-09 65.5 58 55.2
Lj2C7T6 Lonicera japonica HOM05D001389 ORTHO05D002892 3.1e-09 65.5 52 59.6
Oeu042832.1 Olea europaea HOM05D001389 ORTHO05D002892 3.1e-09 65.5 64 51.6
THA.LOC104812395 Tarenaya hassleriana HOM05D001389 ORTHO05D002892 3.1e-09 65.5 41 70.7
AT1G79310 Arabidopsis thaliana HOM05D001389 ORTHO05D002892 4.1e-09 65.1 37 73.0
BcaB02g07210 Brassica carinata HOM05D001389 ORTHO05D002892 4.1e-09 65.1 54 55.6
BcaB02g08683 Brassica carinata HOM05D001389 ORTHO05D002892 4.1e-09 65.1 68 48.5
Lsat_1_v5_gn_4_46521 Lactuca sativa HOM05D001389 ORTHO05D002892 4.1e-09 65.1 42 71.4
Medtr2g063570 Medicago truncatula HOM05D001389 ORTHO05D002892 4.1e-09 65.1 43 62.8
Aa31LG4G1700 Aethionema arabicum HOM05D001389 ORTHO05D002892 6.9e-09 64.3 53 54.7
Carub.0002s2617 Capsella rubella HOM05D001389 ORTHO05D002892 6.9e-09 64.3 42 61.9
Sp5g34380 Schrenkiella parvula HOM05D001389 ORTHO05D002892 6.9e-09 64.3 56 50.0
A07p44410 Brassica napus HOM05D001389 ORTHO05D002892 9.1e-09 63.9 63 49.2
C06p29950 Brassica napus HOM05D001389 ORTHO05D002892 9.1e-09 63.9 64 50.0
BolC6t38156H Brassica oleracea HOM05D001389 ORTHO05D002892 9.1e-09 63.9 62 51.6
BraA07t30363Z Brassica rapa HOM05D001389 ORTHO05D002892 9.1e-09 63.9 64 50.0
BraA07t31950Z Brassica rapa HOM05D001389 ORTHO05D002892 9.1e-09 63.9 63 49.2
CARHR072970 Cardamine hirsuta HOM05D001389 ORTHO05D002892 9.1e-09 63.9 66 51.5
AL2G39930 Arabidopsis lyrata HOM05D001389 ORTHO05D002892 1.2e-08 63.5 64 50.0
A07p27190 Brassica napus HOM05D001389 ORTHO05D002892 1.5e-08 63.2 62 51.6
Ca_03188_v3 Cicer arietinum L. HOM05D001389 ORTHO05D002892 1.5e-08 63.2 90 44.4
DCAR_009667 Daucus carota HOM05D001389 ORTHO05D002892 1.5e-08 63.2 44 65.9
Sp7g12170 Schrenkiella parvula HOM05D001389 ORTHO05D002892 1.5e-08 63.2 40 67.5
QL04p010765 Quercus lobata HOM05D001389 ORTHO05D002892 2.0e-08 62.8 43 62.8
BcaC08g45364 Brassica carinata HOM05D001389 ORTHO05D002892 2.6e-08 62.4 62 50.0
A07p44400 Brassica napus HOM05D001389 ORTHO05D002892 2.6e-08 62.4 53 50.9
C06p53190 Brassica napus HOM05D001389 ORTHO05D002892 2.6e-08 62.4 53 50.9
BolC6t40337H Brassica oleracea HOM05D001389 ORTHO05D002892 2.6e-08 62.4 53 50.9
BraA07t31948Z Brassica rapa HOM05D001389 ORTHO05D002892 2.6e-08 62.4 53 50.9
QL04p010778 Quercus lobata HOM05D001389 ORTHO05D002892 2.6e-08 62.4 43 65.1
QL04p095775 Quercus lobata HOM05D001389 ORTHO05D002892 2.6e-08 62.4 43 65.1
TPR.G3602 Trifolium pratense HOM05D001389 ORTHO05D002892 2.6e-08 62.4 76 42.1
AT1G79320 Arabidopsis thaliana HOM05D001389 ORTHO05D002892 3.4e-08 62.0 58 51.7
Sp1g29540 Schrenkiella parvula HOM05D001389 ORTHO05D001091 3.4e-08 62.0 66 47.0
AL2G39910 Arabidopsis lyrata HOM05D001389 ORTHO05D002892 5.9e-08 61.2 36 69.4
AL2G39920 Arabidopsis lyrata HOM05D001389 ORTHO05D002892 5.9e-08 61.2 36 75.0
ECA248G2318 Erigeron canadensis HOM05D001389 ORTHO05D002892 5.9e-08 61.2 50 58.0
Thhalv10018721m.g Eutrema salsugineum HOM05D001389 ORTHO05D002892 5.9e-08 61.2 58 51.7
QL04p095794 Quercus lobata HOM05D001389 ORTHO05D002892 7.7e-08 60.8 43 60.5
RcHm_v2.0_Chr5g0023131 Rosa chinensis HOM05D001389 ORTHO05D002892 7.7e-08 60.8 63 46.0
HPP92_001768 Vanilla planifolia HOM05D001389 ORTHO05D002892 7.7e-08 60.8 70 48.6
BcaB02g08682 Brassica carinata HOM05D001389 ORTHO05D002892 1.3e-07 60.1 60 51.7
C06p53210 Brassica napus HOM05D001389 ORTHO05D002892 1.3e-07 60.1 37 70.3
BolC6t40339H Brassica oleracea HOM05D001389 ORTHO05D002892 1.3e-07 60.1 37 70.3
BraA07t31949Z Brassica rapa HOM05D001389 ORTHO05D002892 1.3e-07 60.1 37 70.3
unitig_748.g7853 Utricularia gibba HOM05D001389 ORTHO05D002892 1.3e-07 60.1 43 60.5
SMO115G0231 Selaginella moellendorffii HOM05D001389 ORTHO05D002892 1.7e-07 59.7 62 45.2
SMO166G0054 Selaginella moellendorffii HOM05D001389 ORTHO05D002892 1.7e-07 59.7 62 45.2
Hund08739 Selenicereus undatus HOM05D001389 ORTHO05D002892 1.7e-07 59.7 36 69.4
C06p53220 Brassica napus HOM05D001389 ORTHO05D002892 2.2e-07 59.3 63 46.0
BolC6t40340H Brassica oleracea HOM05D001389 ORTHO05D002892 2.2e-07 59.3 63 46.0
HanXRQChr01g0018051 Helianthus annuus HOM05D001389 ORTHO05D002892 3.8e-07 58.5 64 48.4
Pp3c1_20350 Physcomitrium patens HOM05D001389 ORTHO05D002892 3.8e-07 58.5 40 65.0
Sc14g0000590 Simmondsia chinensis HOM05D001389 ORTHO05D002892 3.8e-07 58.5 52 51.9
Os01g0799900 Oryza sativa ssp. japonica HOM05D001389 ORTHO05D002892 6.5e-07 57.8 62 45.2
SEGI_06663 Sequoiadendron giganteum HOM05D001389 ORTHO05D002892 6.5e-07 57.8 66 45.5
unitig_32.g11073 Utricularia gibba HOM05D001389 ORTHO05D002892 6.5e-07 57.8 58 48.3
Zm00001eb352560 Zea mays HOM05D001389 ORTHO05D002892 6.5e-07 57.8 44 59.1
Os05g0496500 Oryza sativa ssp. japonica HOM05D001389 ORTHO05D002892 8.5e-07 57.4 69 42.0
Sc14g0000580 Simmondsia chinensis HOM05D001389 ORTHO05D002892 8.5e-07 57.4 36 69.4
Lalb_Chr25g0284251 Lupinus albus HOM05D001389 ORTHO05D002892 1.4e-06 56.6 71 45.1
HPP92_015990 Vanilla planifolia HOM05D001389 ORTHO05D002892 1.9e-06 56.2 48 54.2
AagrBONN_evm.TU.Sc2ySwM_228.5707 Anthoceros agrestis HOM05D001389 ORTHO05D002892 2.5e-06 55.8 53 49.1
Psat0s11g0080 Pisum sativum HOM05D001389 ORTHO05D002892 3.2e-06 55.5 55 47.3
Zm00001eb150730 Zea mays HOM05D001389 ORTHO05D002892 3.2e-06 55.5 62 41.9


User provided reference genes

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