Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 2.0e-159 566.6 530 100.0
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 2.1e-47 194.5 408 87.0
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 3.6e-44 183.7 197 51.8
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 1.3e-41 175.3 198 51.0
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 2.2e-41 174.5 201 51.2
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 4.9e-41 173.3 548 59.9
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 4.1e-40 170.2 197 48.7
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 5.4e-40 169.9 201 49.3
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 1.2e-39 168.7 198 47.5
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 2.1e-39 167.9 199 48.2
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 2.1e-39 167.9 199 47.7
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 1.7e-38 164.9 200 47.0
BcaC08g47471 Brassica carinata HOM05D006918 ORTHO05D008525 3.0e-38 164.1 200 47.0
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 8.6e-38 162.5 199 46.2
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 2.5e-37 161.0 198 46.5
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 5.6e-37 159.8 559 64.9
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 1.2e-31 142.1 102 64.7
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 8.7e-30 136.0 83 73.5
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 1.1e-29 135.6 83 73.5
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 9.6e-29 132.5 85 70.6
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 1.6e-28 131.7 85 69.4
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 1.6e-28 131.7 85 69.4
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 3.6e-28 130.6 103 60.2
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 6.2e-28 129.8 100 58.0
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 8.1e-28 129.4 103 60.2
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 1.1e-27 129.0 70 80.0
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 1.4e-27 128.6 529 63.3
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 2.4e-27 127.9 103 59.2
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 3.1e-27 127.5 85 67.1
CDE12G0330 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 4.0e-27 127.1 84 71.4
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 4.0e-27 127.1 85 68.2
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 5.2e-27 126.7 85 65.9
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 1.2e-26 125.6 85 64.7
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 2.0e-26 124.8 85 65.9
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 4.4e-26 123.6 99 60.6
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 7.6e-26 122.9 85 65.9
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 9.9e-26 122.5 98 62.2
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 9.9e-26 122.5 98 62.2
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 9.9e-26 122.5 85 63.5
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 9.9e-26 122.5 85 63.5
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 9.9e-26 122.5 124 47.6
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 1.3e-25 122.1 84 65.5
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 1.7e-25 121.7 83 62.7
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 1.7e-25 121.7 85 62.4
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 1.7e-25 121.7 123 49.6
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 2.2e-25 121.3 104 55.8
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 2.9e-25 120.9 85 64.7
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 3.8e-25 120.6 98 61.2
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 3.8e-25 120.6 98 61.2
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 3.8e-25 120.6 523 44.7
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 4.9e-25 120.2 84 63.1
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 4.9e-25 120.2 77 71.4
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 8.4e-25 119.4 85 62.4
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 1.1e-24 119.0 76 69.7
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.1e-24 119.0 99 59.6
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 1.1e-24 119.0 104 55.8
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 1.1e-24 119.0 85 61.2
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 1.9e-24 118.2 76 65.8
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 2.4e-24 117.9 80 65.0
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 2.4e-24 117.9 85 61.2
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 5.4e-24 116.7 383 61.4
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 5.4e-24 116.7 84 63.1
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 5.4e-24 116.7 85 60.0
Cfa019933 Carpinus fangiana HOM05D006918 ORTHO05D008525 9.3e-24 115.9 161 44.1
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 9.3e-24 115.9 127 44.9
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 1.2e-23 115.5 76 68.4
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 1.6e-23 115.2 97 56.7
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 1.6e-23 115.2 84 61.9
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 2.7e-23 114.4 75 68.0
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 4.6e-23 113.6 85 60.0
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 4.6e-23 113.6 98 55.1
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 4.6e-23 113.6 71 66.2
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 6.0e-23 113.2 77 63.6
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 7.8e-23 112.8 84 59.5
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 7.8e-23 112.8 71 66.2
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 7.8e-23 112.8 78 62.8
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 1.0e-22 112.5 71 66.2
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 1.3e-22 112.1 182 39.0
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 1.3e-22 112.1 84 59.5
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 1.3e-22 112.1 84 59.5
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 1.3e-22 112.1 84 60.7
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 1.3e-22 112.1 63 74.6
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 1.7e-22 111.7 67 70.1
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 1.7e-22 111.7 80 61.2
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 2.3e-22 111.3 76 61.8
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 3.9e-22 110.5 212 34.0
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 3.9e-22 110.5 96 55.2
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 3.9e-22 110.5 68 69.1
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 8.7e-22 109.4 96 55.2
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 1.1e-21 109.0 503 44.3
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 4.3e-21 107.1 182 37.9
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 7.3e-21 106.3 86 58.1
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 1.3e-20 105.5 88 58.0
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 1.3e-20 105.5 88 58.0
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 1.3e-20 105.5 76 61.8
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 1.6e-20 105.1 76 57.9
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 6.2e-20 103.2 184 38.6
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 8.1e-20 102.8 77 61.0
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 1.1e-19 102.4 99 53.5
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 1.1e-19 102.4 104 47.1
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 5.8e-18 96.7 71 59.2
Lj5C202T3 Lonicera japonica HOM05D006918 ORTHO05D008525 3.8e-17 94.0 162 37.7
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 6.4e-17 93.2 63 60.3
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 4.6e-15 87.0 85 45.9
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 1.0e-14 85.9 85 45.9
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 3.9e-14 84.0 85 44.7
SalBow8G1439 Salvia bowleyana HOM05D006918 ORTHO05D008525 3.3e-13 80.9 87 46.0
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 9.6e-13 79.3 43 79.1
Lj5C202T4 Lonicera japonica HOM05D006918 ORTHO05D008525 2.9e-09 67.8 56 55.4
FAN16G1729 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.4e-08 65.5 71 43.7
Peaxi162Scf00099g00032 Petunia axillaris HOM05D002986 ORTHO05D007611 7.9e-07 59.7 87 36.8
Peaxi162Scf00683g00048 Petunia axillaris HOM05D006707 ORTHO05D008243 1.3e-06 58.9 152 25.0
FvH4_5g17250 Fragaria vesca HOM05D006707 ORTHO05D008243 5.1e-06 57.0 153 24.2
FAN18G2052 Fragaria x ananassa HOM05D006707 ORTHO05D008243 5.1e-06 57.0 153 24.2


User provided reference genes

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