Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1144 Trochodendron aralioides HOM05D002163 ORTHO05D414496 1.9e-51 205.7 113 100.0
TAR626G0216 Trochodendron aralioides HOM05D002163 ORTHO05D002386 5.4e-22 107.8 82 70.7
Nn1g07647 Nelumbo nucifera HOM05D002163 ORTHO05D002386 1.4e-17 93.2 72 63.9
TAR624G1228 Trochodendron aralioides HOM05D002163 ORTHO05D002386 1.2e-16 90.1 79 59.5
Aqoxy4G02257 Aquilegia oxysepala HOM05D002163 ORTHO05D002386 1.1e-14 83.6 78 53.8
MBI15_g26854_MAGBIO Magnolia biondii HOM05D002163 ORTHO05D002386 1.4e-14 83.2 77 54.5
Gohir.A05G177100 Gossypium hirsutum HOM05D002163 ORTHO05D002386 1.3e-12 76.6 71 59.2
Cfa021531 Carpinus fangiana HOM05D002163 ORTHO05D002386 5.0e-12 74.7 75 50.7
PSO541G0268 Papaver somniferum HOM05D002163 ORTHO05D002386 6.6e-12 74.3 59 64.4
QL05p066200 Quercus lobata HOM05D002163 ORTHO05D002386 6.6e-12 74.3 66 60.6
PSO675G8732 Papaver somniferum HOM05D002163 ORTHO05D002386 8.6e-12 73.9 75 54.7
CiPaw.09G113100 Carya illinoinensis HOM05D002163 ORTHO05D002386 1.1e-11 73.6 89 47.2
Gohir.D05G180500 Gossypium hirsutum HOM05D002163 ORTHO05D002386 1.9e-11 72.8 78 53.8
Haze_07062 Corylus avellana HOM05D002163 ORTHO05D002386 2.5e-11 72.4 73 50.7
Gorai.009G185500 Gossypium raimondii HOM05D002163 ORTHO05D002386 2.5e-11 72.4 74 56.8
Thecc.06G244600 Theobroma cacao HOM05D002163 ORTHO05D002386 2.5e-11 72.4 84 53.6
Prupe.4G000500 Prunus persica HOM05D002163 ORTHO05D002386 3.3e-11 72.0 67 62.7
MD05G1364500 Malus domestica HOM05D002163 ORTHO05D002386 9.5e-11 70.5 77 55.8
Duzib192G1072 Durio zibethinus HOM05D002163 ORTHO05D002386 1.6e-10 69.7 81 53.1
Sabra06G0000900 Salix brachista HOM05D002163 ORTHO05D002386 1.6e-10 69.7 70 54.3
Sabra16G0007700 Salix brachista HOM05D002163 ORTHO05D002386 1.6e-10 69.7 88 46.6
Ciclev10015057m.g Citrus clementina HOM05D002163 ORTHO05D002386 2.8e-10 68.9 67 59.7
Potri.016G001000 Populus trichocarpa HOM05D002163 ORTHO05D002386 6.2e-10 67.8 70 52.9
Actinidia26624 Actinidia chinensis HOM05D002163 ORTHO05D002386 1.1e-09 67.0 78 53.8
COL.COLO4_31968 Corchorus olitorius HOM05D002163 ORTHO05D002386 1.4e-09 66.6 83 49.4
TWI63G0140 Tripterygium wilfordii HOM05D002163 ORTHO05D002386 2.3e-09 65.9 71 52.1
CiPaw.10G085000 Carya illinoinensis HOM05D002163 ORTHO05D002386 3.1e-09 65.5 71 50.7
MELO3C007987.2 Cucumis melo HOM05D002163 ORTHO05D002386 4.0e-09 65.1 72 56.9
CDE05G3653 Ceratophyllum demersum HOM05D002163 ORTHO05D002386 5.2e-09 64.7 71 49.3
CsaV3_6G048000 Cucumis sativus L. HOM05D002163 ORTHO05D002386 5.2e-09 64.7 72 56.9
Dinv04378 Davidia involucrata HOM05D002163 ORTHO05D002386 6.8e-09 64.3 84 47.6
Zm00001eb276160 Zea mays HOM05D002163 ORTHO05D002386 6.8e-09 64.3 75 45.3
ClCG01G021010 Citrullus lanatus HOM05D002163 ORTHO05D002386 1.2e-08 63.5 67 53.7
ATR0751G113 Amborella trichopoda HOM05D002163 ORTHO05D002386 1.5e-08 63.2 85 47.1
Eucgr.E04233 Eucalyptus grandis HOM05D002163 ORTHO05D002386 1.5e-08 63.2 73 46.6
Cpa.g.sc27.184 Carica papaya HOM05D002163 ORTHO05D002386 2.0e-08 62.8 66 53.0
Os06g0609700 Oryza sativa ssp. japonica HOM05D002163 ORTHO05D002386 2.6e-08 62.4 72 45.8
CDE02G3163 Ceratophyllum demersum HOM05D002163 ORTHO05D002386 4.4e-08 61.6 71 47.9
Rhsim02G0087600 Rhododendron simsii HOM05D002163 ORTHO05D002386 5.8e-08 61.2 78 44.9
Manes.08G014800 Manihot esculenta HOM05D002163 ORTHO05D002386 9.9e-08 60.5 71 49.3
CSS0003902 Camellia sinensis var. sinensis HOM05D002163 ORTHO05D002386 2.2e-07 59.3 79 43.0
Oeu016930.1 Olea europaea HOM05D002163 ORTHO05D002386 2.2e-07 59.3 76 43.4
TPR.G5952 Trifolium pratense HOM05D002163 ORTHO05D002386 3.7e-07 58.5 72 48.6
DCAR_005489 Daucus carota HOM05D002163 ORTHO05D002386 1.1e-06 57.0 60 56.7
Lj4g0014611 Lotus japonicus HOM05D002163 ORTHO05D002386 1.9e-06 56.2 62 51.6
HPP92_027044 Vanilla planifolia HOM05D002163 ORTHO05D002386 1.9e-06 56.2 81 42.0
SalBow8G3928 Salvia bowleyana HOM05D002163 ORTHO05D002386 2.4e-06 55.8 71 43.7
Ca_13512_v3 Cicer arietinum L. HOM05D002163 ORTHO05D002386 3.2e-06 55.5 69 46.4
Ca_13516_v3 Cicer arietinum L. HOM05D002163 ORTHO05D002386 3.2e-06 55.5 69 46.4
MD10G1342200 Malus domestica HOM05D002163 ORTHO05D002386 3.2e-06 55.5 74 48.6
vmacro15707 Vaccinium macrocarpon HOM05D002163 ORTHO05D002386 4.1e-06 55.1 78 42.3
Phvul.003G089300 Phaseolus vulgaris HOM05D002163 ORTHO05D002386 5.4e-06 54.7 71 46.5
RcHm_v2.0_Chr5g0000061 Rosa chinensis HOM05D002163 ORTHO05D002386 7.1e-06 54.3 81 46.9
GSVIVG01007067001 Vitis vinifera HOM05D002163 ORTHO05D002386 7.1e-06 54.3 50 58.0


User provided reference genes

Program Settings