Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0696 Trochodendron aralioides HOM05D006300 ORTHO05D007623 1.4e-177 626.3 364 100.0
TAR624G0799 Trochodendron aralioides HOM05D006300 ORTHO05D007623 4.3e-137 491.9 361 76.7
Nn6g35476 Nelumbo nucifera HOM05D006300 ORTHO05D007623 4.9e-117 425.2 361 68.4
TAR383G0464 Trochodendron aralioides HOM05D006300 ORTHO05D007623 6.6e-114 414.8 348 71.8
Dinv30382 Davidia involucrata HOM05D006300 ORTHO05D007623 3.1e-103 379.4 362 64.9
Nn8g38867 Nelumbo nucifera HOM05D006300 ORTHO05D007623 1.4e-100 370.5 361 62.9
Dinv37916 Davidia involucrata HOM05D006300 ORTHO05D007623 1.5e-86 323.9 353 60.3
GSVIVG01016850001 Vitis vinifera HOM05D006300 ORTHO05D007623 2.7e-83 313.2 346 59.8
Actinidia21757 Actinidia chinensis HOM05D006300 ORTHO05D007623 3.3e-81 306.2 322 59.3
QL05p012743 Quercus lobata HOM05D006300 ORTHO05D007623 4.8e-80 302.4 355 58.3
MD17G1174400 Malus domestica HOM05D006300 ORTHO05D007623 2.6e-78 296.6 359 53.8
Manes.11G026800 Manihot esculenta HOM05D006300 ORTHO05D007623 2.9e-77 293.1 371 53.6
Manes.04G139300 Manihot esculenta HOM05D006300 ORTHO05D007623 6.5e-77 292.0 331 58.0
Prupe.3G050100 Prunus persica HOM05D006300 ORTHO05D007623 8.5e-77 291.6 351 59.5
CANSAT56G1450 Cannabis sativa HOM05D006300 ORTHO05D007623 7.2e-76 288.5 388 53.4
Duzib192G0510 Durio zibethinus HOM05D006300 ORTHO05D007623 1.6e-75 287.3 312 59.0
CAN.G1389.16 Capsicum annuum HOM05D006300 ORTHO05D007623 2.1e-75 287.0 339 54.3
Sopen03g040370 Solanum pennellii HOM05D006300 ORTHO05D007623 3.6e-75 286.2 335 55.2
Thecc.06G111200 Theobroma cacao HOM05D006300 ORTHO05D007623 4.6e-75 285.8 305 65.6
MBI01_g01269_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 7.9e-75 285.0 365 55.9
CiPaw.01G225300 Carya illinoinensis HOM05D006300 ORTHO05D007623 1.8e-74 283.9 357 51.5
Solyc03g121560.3 Solanum lycopersicum HOM05D006300 ORTHO05D007623 3.9e-74 282.7 332 54.5
MBI04_g34125_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 6.7e-74 282.0 355 54.6
Gohir.D03G056300 Gossypium hirsutum HOM05D006300 ORTHO05D007623 1.3e-72 277.7 339 59.0
Gohir.A02G115200 Gossypium hirsutum HOM05D006300 ORTHO05D007623 1.7e-72 277.3 337 59.1
Gorai.003G059300 Gossypium raimondii HOM05D006300 ORTHO05D007623 1.7e-72 277.3 339 59.0
Aqoxy7G01215 Aquilegia oxysepala HOM05D006300 ORTHO05D007623 2.2e-72 276.9 291 60.5
Duzib160G0060 Durio zibethinus HOM05D006300 ORTHO05D007623 4.8e-72 275.8 308 63.0
PSO210G0359 Papaver somniferum HOM05D006300 ORTHO05D007623 4.8e-72 275.8 348 52.9
COL.COLO4_30656 Corchorus olitorius HOM05D006300 ORTHO05D007623 1.1e-71 274.6 308 64.0
vmacro18787 Vaccinium macrocarpon HOM05D006300 ORTHO05D007623 1.1e-71 274.6 332 62.0
Duzib235G0903 Durio zibethinus HOM05D006300 ORTHO05D007623 4.1e-71 272.7 336 54.2
PSO210G2046 Papaver somniferum HOM05D006300 ORTHO05D007623 9.1e-71 271.6 360 51.4
Gohir.D10G061000 Gossypium hirsutum HOM05D006300 ORTHO05D007623 1.2e-70 271.2 343 56.3
Rhsim08G0233100 Rhododendron simsii HOM05D006300 ORTHO05D007623 2.0e-70 270.4 174 82.2
CiPaw.02G140400 Carya illinoinensis HOM05D006300 ORTHO05D007623 2.6e-70 270.0 356 51.7
PGR102G2043 Punica granatum HOM05D006300 ORTHO05D007623 2.6e-70 270.0 177 78.0
MELO3C024394.2 Cucumis melo HOM05D006300 ORTHO05D007623 5.9e-70 268.9 342 52.6
Haze_15947 Corylus avellana HOM05D006300 ORTHO05D007623 1.0e-69 268.1 386 50.0
AT1G17665 Arabidopsis thaliana HOM05D006300 ORTHO05D007623 3.8e-69 266.2 192 71.9
Lsat_1_v5_gn_4_95241 Lactuca sativa HOM05D006300 ORTHO05D007623 5.0e-69 265.8 186 74.2
Gohir.A10G059500 Gossypium hirsutum HOM05D006300 ORTHO05D007623 8.5e-69 265.0 342 59.4
CsaV3_7G034830 Cucumis sativus L. HOM05D006300 ORTHO05D007623 3.2e-68 263.1 340 52.4
Potri.003G038600 Populus trichocarpa HOM05D006300 ORTHO05D007623 3.2e-68 263.1 191 73.8
CDE04G2687 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 4.2e-68 262.7 307 55.4
Nitab4.5_0001295g0030 Nicotiana tabacum HOM05D006300 ORTHO05D007623 4.2e-68 262.7 362 53.0
arahy.Tifrunner.gnm1.ann1.X9C73S Arachis hypogaea HOM05D006300 ORTHO05D007623 7.2e-68 261.9 351 53.0
Cc04_g01980 Coffea canephora HOM05D006300 ORTHO05D007623 9.4e-68 261.5 171 77.2
Carub.0001s1740 Capsella rubella HOM05D006300 ORTHO05D007623 4.7e-67 259.2 194 70.1
CDE06G2767 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 7.9e-67 258.5 338 50.9
Ah.15g094170 Amaranthus hybridus HOM05D006300 ORTHO05D007623 1.4e-66 257.7 343 48.4
Gorai.011G065200 Gossypium raimondii HOM05D006300 ORTHO05D007623 1.8e-66 257.3 339 55.8
HanXRQChr09g0276431 Helianthus annuus HOM05D006300 ORTHO05D007623 2.3e-66 256.9 176 77.3
THA.LOC104812213 Tarenaya hassleriana HOM05D006300 ORTHO05D007623 2.3e-66 256.9 366 46.2
Hund20857 Selenicereus undatus HOM05D006300 ORTHO05D007623 8.8e-66 255.0 396 46.2
AL1G29990 Arabidopsis lyrata HOM05D006300 ORTHO05D007623 1.1e-65 254.6 350 46.9
arahy.Tifrunner.gnm1.ann1.F4I7X2 Arachis hypogaea HOM05D006300 ORTHO05D007623 1.1e-65 254.6 350 51.1
CARHR018270 Cardamine hirsuta HOM05D006300 ORTHO05D007623 1.5e-65 254.2 193 70.5
PGR102G2710 Punica granatum HOM05D006300 ORTHO05D007623 1.5e-65 254.2 177 74.0
BcaB07g34023 Brassica carinata HOM05D006300 ORTHO05D007623 2.0e-65 253.8 189 70.9
Medtr2g100100 Medicago truncatula HOM05D006300 ORTHO05D007623 5.7e-65 252.3 342 53.2
Sp1g15770 Schrenkiella parvula HOM05D006300 ORTHO05D007623 9.7e-65 251.5 201 67.7
Thhalv10008108m.g Eutrema salsugineum HOM05D006300 ORTHO05D007623 1.7e-64 250.8 173 74.6
BcaC05g25688 Brassica carinata HOM05D006300 ORTHO05D007623 3.7e-64 249.6 192 68.8
C05p16080 Brassica napus HOM05D006300 ORTHO05D007623 3.7e-64 249.6 192 68.8
BolC5t30308H Brassica oleracea HOM05D006300 ORTHO05D007623 3.7e-64 249.6 192 68.8
ECA232G1041 Erigeron canadensis HOM05D000140 ORTHO05D000087 1.1e-63 248.1 172 76.7
Migut.I01022 Erythranthe guttata HOM05D006300 ORTHO05D007623 1.8e-63 247.3 337 49.0
RcHm_v2.0_Chr2g0142971 Rosa chinensis HOM05D006300 ORTHO05D007623 5.3e-63 245.7 194 69.1
SalBow6G0902 Salvia bowleyana HOM05D006300 ORTHO05D007623 2.0e-62 243.8 164 78.0
MSTRG.10986 Avicennia marina HOM05D006300 ORTHO05D007623 7.7e-62 241.9 180 71.7
FvH4_6g33270 Fragaria vesca HOM05D006300 ORTHO05D007623 2.9e-61 240.0 196 68.9
FAN14G0371 Fragaria x ananassa HOM05D006300 ORTHO05D007623 2.9e-61 240.0 196 68.9
Sabra03G0025100 Salix brachista HOM05D006300 ORTHO05D007623 1.1e-60 238.0 209 64.1
DCAR_007620 Daucus carota HOM05D006300 ORTHO05D007623 1.5e-60 237.7 333 48.6
A06p13560 Brassica napus HOM05D006300 ORTHO05D007623 4.2e-60 236.1 179 72.1
Lalb_Chr24g0396361 Lupinus albus HOM05D006300 ORTHO05D007623 5.5e-60 235.7 294 51.0
Lj3g0013508 Lotus japonicus HOM05D006300 ORTHO05D007623 7.2e-60 235.3 186 71.5
AUR62038132 Chenopodium quinoa HOM05D000073 ORTHO05D000033 1.2e-59 234.6 161 76.4
Glyma.15G023900 Glycine max HOM05D006300 ORTHO05D007623 1.2e-59 234.6 186 68.3
BraA06t24508Z Brassica rapa HOM05D006300 ORTHO05D007623 1.6e-59 234.2 333 50.5
Glyma.13G350600 Glycine max HOM05D006300 ORTHO05D007623 4.7e-59 232.6 169 75.7
Phvul.005G159900 Phaseolus vulgaris HOM05D006300 ORTHO05D007623 2.3e-58 230.3 174 71.3
Aa31LG7G2500 Aethionema arabicum HOM05D006300 ORTHO05D007623 6.7e-58 228.8 162 73.5
FAN02G1261 Fragaria x ananassa HOM05D006300 ORTHO05D007623 1.1e-57 228.0 184 69.6
FAN05G1138 Fragaria x ananassa HOM05D006300 ORTHO05D007623 1.7e-56 224.2 184 69.0
TPR.G6530 Trifolium pratense HOM05D006300 ORTHO05D007623 2.8e-56 223.4 186 67.2
Psat4g199680 Pisum sativum HOM05D006300 ORTHO05D007623 8.2e-56 221.9 179 68.7
Nitab4.5_0007429g0010 Nicotiana tabacum HOM05D006300 ORTHO05D007623 1.8e-55 220.7 286 57.0
VMungo1080G1020 Vigna mungo HOM05D006300 ORTHO05D007623 1.6e-54 217.6 180 67.8
Mapoly0001s0383 Marchantia polymorpha HOM05D006300 ORTHO05D007623 2.6e-54 216.9 172 65.1
SGA_v2.0_scaffold127G34049 Striga asiatica HOM05D006300 ORTHO05D007623 4.5e-54 216.1 177 66.7
Medtr8g016260 Medicago truncatula HOM05D006300 ORTHO05D007623 8.5e-53 211.8 189 62.4
Ciclev10025783m.g Citrus clementina HOM05D006300 ORTHO05D007623 3.2e-52 209.9 173 66.5
Peaxi162Scf00038g01529 Petunia axillaris HOM05D006300 ORTHO05D007623 1.4e-50 204.5 232 54.7
Pp3c7_7340 Physcomitrium patens HOM05D006300 ORTHO05D007623 1.8e-50 204.1 187 59.9
AagrBONN_evm.TU.Sc2ySwM_228.500 Anthoceros agrestis HOM05D006300 ORTHO05D007623 2.6e-49 200.3 167 63.5
ATR0026G017 Amborella trichopoda HOM05D006300 ORTHO05D007623 7.5e-49 198.7 176 61.4
Atru.chr1.3720 Acer truncatum HOM05D001008 ORTHO05D003146 4.1e-47 193.0 293 49.1
ClCG09G000650 Citrullus lanatus HOM05D006300 ORTHO05D007623 5.9e-46 189.1 293 45.7
FAN09G0301 Fragaria x ananassa HOM05D006300 ORTHO05D007623 1.0e-45 188.3 203 56.7
Oeu039964.1 Olea europaea HOM05D006300 ORTHO05D007623 1.5e-44 184.5 124 76.6
Ca_28052_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 1.2e-41 174.9 156 64.1
Ca_30533_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 1.2e-41 174.9 156 64.1
PGSC0003DMG400002589 Solanum tuberosum HOM05D006300 ORTHO05D007623 1.8e-39 167.5 261 49.4
Cpa.g.sc25.55 Carica papaya HOM05D006300 ORTHO05D007623 2.0e-38 164.1 104 82.7
HPP92_003967 Vanilla planifolia HOM05D006300 ORTHO05D007623 1.7e-37 161.0 124 68.5
TPR.G7922 Trifolium pratense HOM05D006300 ORTHO05D007623 8.0e-35 152.1 119 70.6
Os01g0197400 Oryza sativa ssp. japonica HOM05D006300 ORTHO05D007623 7.8e-30 135.6 191 43.5
Zm00001eb337890 Zea mays HOM05D006300 ORTHO05D007623 1.1e-28 131.7 168 44.6
arahy.Tifrunner.gnm1.ann1.046NH9 Arachis hypogaea HOM05D006300 ORTHO05D007623 2.1e-27 127.5 110 64.5
COL.COLO4_30657 Corchorus olitorius HOM05D001008 ORTHO05D007623 2.9e-24 117.1 70 87.1
arahy.Tifrunner.gnm1.ann1.Z85M5C Arachis hypogaea HOM05D006300 ORTHO05D007623 3.7e-24 116.7 115 59.1
CSS0024626 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 4.7e-19 99.8 64 81.2
arahy.Tifrunner.gnm1.ann1.RJ4DBV Arachis hypogaea HOM05D006300 ORTHO05D007623 1.8e-18 97.8 73 74.0
CSS0019345 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 1.8e-18 97.8 231 43.3
Sed0006903 Sechium edule HOM05D006300 ORTHO05D007623 1.2e-14 85.1 230 32.6
Lj9P518T56 Lonicera japonica HOM05D006300 ORTHO05D007623 2.1e-14 84.3 159 47.8
Cpa.g.sc25.56 Carica papaya HOM05D006300 ORTHO05D007623 4.6e-14 83.2 191 38.2
Sc15g0000130 Simmondsia chinensis HOM05D006300 ORTHO05D007623 3.9e-13 80.1 231 33.3
arahy.Tifrunner.gnm1.ann1.IE7N3Z Arachis hypogaea HOM05D006300 ORTHO05D007623 2.5e-12 77.4 107 45.8
MBI06_g20962_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 7.3e-12 75.9 40 92.5
MBI09_g03017_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 2.1e-11 74.3 39 92.3
MBI07_g16251_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 8.1e-11 72.4 64 64.1
arahy.Tifrunner.gnm1.ann1.24L57E Arachis hypogaea HOM05D006300 ORTHO05D007623 1.7e-08 64.7 76 55.3
Oeu007005.1 Olea europaea HOM05D006300 ORTHO05D007623 4.9e-08 63.2 42 73.8


User provided reference genes

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