Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0532 Trochodendron aralioides HOM05D002822 ORTHO05D003179 1.1e-43 179.5 88 100.0
TAR636G1209 Trochodendron aralioides HOM05D002822 ORTHO05D003179 6.9e-41 170.2 83 100.0
TAR636G0736 Trochodendron aralioides HOM05D002822 ORTHO05D415434 1.4e-38 162.5 81 97.5
TAR365G0855 Trochodendron aralioides HOM05D002822 ORTHO05D003179 3.7e-26 121.3 90 71.1
TAR365G1259 Trochodendron aralioides HOM05D002822 ORTHO05D003179 1.2e-24 116.3 90 68.9
Nn5g30166 Nelumbo nucifera HOM05D002822 ORTHO05D003179 7.4e-19 97.1 85 57.6
Aqoxy7G00033 Aquilegia oxysepala HOM05D002822 ORTHO05D003179 1.5e-16 89.4 90 55.6
GSVIVG01018788001 Vitis vinifera HOM05D002822 ORTHO05D003179 1.0e-15 86.7 86 55.8
Hma1.2p1_0743F.1_g211620 Hydrangea macrophylla HOM05D002822 ORTHO05D003179 2.5e-14 82.0 87 52.9
MBI05_g15348_MAGBIO Magnolia biondii HOM05D002822 ORTHO05D003179 7.2e-14 80.5 85 55.3
Aqoxy6G00179 Aquilegia oxysepala HOM05D002822 ORTHO05D003179 1.6e-13 79.3 72 54.2
Lj4C218G4 Lonicera japonica HOM05D002822 ORTHO05D003179 2.1e-13 79.0 89 51.7
Potri.005G114800 Populus trichocarpa HOM05D002822 ORTHO05D003179 2.1e-13 79.0 84 53.6
Potri.007G012200 Populus trichocarpa HOM05D002822 ORTHO05D003179 4.6e-13 77.8 74 52.7
CSS0040682 Camellia sinensis var. sinensis HOM05D002822 ORTHO05D003179 6.1e-13 77.4 91 51.6
Manes.01G145400 Manihot esculenta HOM05D002822 ORTHO05D003179 6.1e-13 77.4 74 54.1
vmacro18417 Vaccinium macrocarpon HOM05D002822 ORTHO05D003179 3.9e-12 74.7 81 46.9
Manes.02G103900 Manihot esculenta HOM05D002822 ORTHO05D003179 8.8e-12 73.6 72 55.6
TWI53G0573 Tripterygium wilfordii HOM05D002822 ORTHO05D003179 4.3e-11 71.2 91 48.4
QL06p032625 Quercus lobata HOM05D002822 ORTHO05D003179 5.7e-11 70.9 90 45.6
Rhsim08G0033900 Rhododendron simsii HOM05D002822 ORTHO05D003179 7.4e-11 70.5 89 44.9
TWI09G0155 Tripterygium wilfordii HOM05D002822 ORTHO05D003179 1.7e-10 69.3 89 47.2
Cpa.g.sc6.243 Carica papaya HOM05D002822 ORTHO05D003179 2.2e-10 68.9 92 46.7
TWI79G0578 Tripterygium wilfordii HOM05D002822 ORTHO05D003179 3.7e-10 68.2 90 45.6
Duzib187G1364 Durio zibethinus HOM05D002822 ORTHO05D003179 4.8e-10 67.8 83 48.2
COL.COLO4_21917 Corchorus olitorius HOM05D002822 ORTHO05D003179 6.3e-10 67.4 82 46.3
Nitab4.5_0003271g0040 Nicotiana tabacum HOM05D002822 ORTHO05D003179 8.2e-10 67.0 82 46.3
Actinidia28702 Actinidia chinensis HOM05D002822 ORTHO05D003179 1.1e-09 66.6 50 66.0
Nitab4.5_0006286g0010 Nicotiana tabacum HOM05D002822 ORTHO05D003179 2.4e-09 65.5 90 42.2
Oeu035304.1 Olea europaea HOM05D002822 ORTHO05D003179 1.5e-08 62.8 88 43.2
Thecc.01G019600 Theobroma cacao HOM05D002822 ORTHO05D003179 2.0e-08 62.4 82 43.9
Solyc02g083960.4 Solanum lycopersicum HOM05D002822 ORTHO05D003179 3.4e-08 61.6 80 46.2
Sopen02g028760 Solanum pennellii HOM05D002822 ORTHO05D003179 4.5e-08 61.2 80 46.2
Sabra07G0009500 Salix brachista HOM05D002822 ORTHO05D003179 5.9e-08 60.8 74 50.0
Sed0005535 Sechium edule HOM05D002822 ORTHO05D003179 5.9e-08 60.8 95 43.2
SalBow3G2907 Salvia bowleyana HOM05D002822 ORTHO05D003179 1.0e-07 60.1 82 45.1
Sed0016265 Sechium edule HOM05D002822 ORTHO05D003179 1.0e-07 60.1 95 40.0
PGSC0003DMG400003560 Solanum tuberosum HOM05D002822 ORTHO05D003179 1.0e-07 60.1 80 45.0
Oeu062502.1 Olea europaea HOM05D002822 ORTHO05D003179 1.3e-07 59.7 88 42.0
THA.LOC104819751 Tarenaya hassleriana HOM05D002822 ORTHO05D003179 2.2e-07 58.9 91 40.7
MSTRG.2709 Avicennia marina HOM05D002822 ORTHO05D003179 2.9e-07 58.5 90 40.0
Cfa006968 Carpinus fangiana HOM05D002822 ORTHO05D003179 2.9e-07 58.5 56 48.2
MD02G1133100 Malus domestica HOM05D002822 ORTHO05D003179 5.0e-07 57.8 46 58.7
TWI73G0572 Tripterygium wilfordii HOM05D002822 ORTHO05D003179 5.0e-07 57.8 74 44.6
DCAR_021500 Daucus carota HOM05D002822 ORTHO05D003179 6.5e-07 57.4 88 42.0
ECA246G0773 Erigeron canadensis HOM05D002822 ORTHO05D003179 6.5e-07 57.4 47 61.7
Atru.chr3.794 Acer truncatum HOM05D002822 ORTHO05D003179 8.5e-07 57.0 70 45.7
Gorai.007G195400 Gossypium raimondii HOM05D002822 ORTHO05D003179 8.5e-07 57.0 84 41.7
Gohir.A11G175700 Gossypium hirsutum HOM05D002822 ORTHO05D003179 1.1e-06 56.6 84 41.7
Cc07_g10650 Coffea canephora HOM05D002822 ORTHO05D003179 1.9e-06 55.8 92 37.0
Haze_03770 Corylus avellana HOM05D002822 ORTHO05D003179 1.9e-06 55.8 44 54.5
HanXRQChr16g0531291 Helianthus annuus HOM05D002822 ORTHO05D003179 1.9e-06 55.8 91 40.7
Peaxi162Scf00083g00623 Petunia axillaris HOM05D002822 ORTHO05D003179 1.9e-06 55.8 86 47.7
Gohir.D11G183500 Gossypium hirsutum HOM05D002822 ORTHO05D003179 2.5e-06 55.5 84 40.5
Nitab4.5_0000188g0100 Nicotiana tabacum HOM05D002822 ORTHO05D003179 2.5e-06 55.5 82 42.7
VMungo0647G2487 Vigna mungo HOM05D002822 ORTHO05D003179 2.5e-06 55.5 44 52.3
CAN.G1671.9 Capsicum annuum HOM05D002822 ORTHO05D003179 3.2e-06 55.1 80 43.8
CiPaw.07G058100 Carya illinoinensis HOM05D002822 ORTHO05D003179 4.2e-06 54.7 70 41.4
MD15G1245500 Malus domestica HOM05D002822 ORTHO05D003179 4.2e-06 54.7 93 39.8
Duzib147G1511 Durio zibethinus HOM05D002822 ORTHO05D003179 7.2e-06 53.9 79 41.8


User provided reference genes

Program Settings