Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0398 Trochodendron aralioides HOM05D000916 ORTHO05D038843 3.7e-57 224.6 107 100.0
PGR031G0424 Punica granatum HOM05D000916 ORTHO05D003833 4.2e-16 88.2 46 82.6
Nn2g15162 Nelumbo nucifera HOM05D000916 ORTHO05D003833 7.1e-16 87.4 48 75.0
Haze_03096 Corylus avellana HOM05D000916 ORTHO05D003833 9.3e-16 87.0 52 73.1
Cc04_g14700 Coffea canephora HOM05D000916 ORTHO05D003833 1.2e-15 86.7 48 77.1
TPR.G975 Trifolium pratense HOM05D000916 ORTHO05D003833 1.6e-15 86.3 63 61.9
ClCG09G004480 Citrullus lanatus HOM05D000916 ORTHO05D003833 2.1e-15 85.9 45 82.2
Dinv43398 Davidia involucrata HOM05D000916 ORTHO05D003833 2.1e-15 85.9 48 77.1
Lj3g0008484 Lotus japonicus HOM05D000916 ORTHO05D003833 2.1e-15 85.9 60 66.7
Manes.06G024300 Manihot esculenta HOM05D000916 ORTHO05D003833 2.1e-15 85.9 48 75.0
Sabra16G0159200 Salix brachista HOM05D000916 ORTHO05D003833 2.1e-15 85.9 59 62.7
Sed0027440 Sechium edule HOM05D000916 ORTHO05D003833 2.1e-15 85.9 45 82.2
Rhsim01G0124600 Rhododendron simsii HOM05D000916 ORTHO05D003833 2.7e-15 85.5 52 69.2
GSVIVG01001445001 Vitis vinifera HOM05D000916 ORTHO05D003833 2.7e-15 85.5 45 82.2
EL10Ac2g04388 Beta vulgaris HOM05D000916 ORTHO05D003833 3.5e-15 85.1 65 61.5
Eucgr.G03276 Eucalyptus grandis HOM05D000916 ORTHO05D003833 3.5e-15 85.1 46 78.3
Aqoxy2G00215 Aquilegia oxysepala HOM05D000916 ORTHO05D003833 4.6e-15 84.7 48 72.9
FvH4_7g01940 Fragaria vesca HOM05D000916 ORTHO05D003833 4.6e-15 84.7 48 72.9
FAN03G0804 Fragaria x ananassa HOM05D000916 ORTHO05D003833 4.6e-15 84.7 48 72.9
FAN03G2955 Fragaria x ananassa HOM05D000916 ORTHO05D003833 4.6e-15 84.7 48 72.9
FAN06G1297 Fragaria x ananassa HOM05D000916 ORTHO05D003833 4.6e-15 84.7 48 72.9
Glyma.09G226000 Glycine max HOM05D000916 ORTHO05D003833 4.6e-15 84.7 69 58.0
Glyma.12G010600 Glycine max HOM05D000916 ORTHO05D003833 4.6e-15 84.7 51 74.5
Nn7g36359 Nelumbo nucifera HOM05D000916 ORTHO05D003833 4.6e-15 84.7 48 75.0
QL04p010554 Quercus lobata HOM05D000916 ORTHO05D003833 4.6e-15 84.7 45 80.0
RcHm_v2.0_Chr1g0318891 Rosa chinensis HOM05D000916 ORTHO05D003833 4.6e-15 84.7 48 72.9
Thecc.01G403500 Theobroma cacao HOM05D000916 ORTHO05D003833 4.6e-15 84.7 48 70.8
TAR633G0084 Trochodendron aralioides HOM05D000916 ORTHO05D003833 4.6e-15 84.7 48 77.1
Ca_14192_v3 Cicer arietinum L. HOM05D000916 ORTHO05D003833 6.0e-15 84.3 45 77.8
MELO3C023590.2 Cucumis melo HOM05D000916 ORTHO05D003833 6.0e-15 84.3 45 80.0
CsaV3_7G030660 Cucumis sativus L. HOM05D000916 ORTHO05D003833 6.0e-15 84.3 45 80.0
Nitab4.5_0006695g0060 Nicotiana tabacum HOM05D000916 ORTHO05D003833 6.0e-15 84.3 48 75.0
Psat5g211600 Pisum sativum HOM05D000916 ORTHO05D003833 6.0e-15 84.3 45 77.8
RcHm_v2.0_Chr1g0318661 Rosa chinensis HOM05D000916 ORTHO05D003833 6.0e-15 84.3 48 70.8
vmacro21144 Vaccinium macrocarpon HOM05D000916 ORTHO05D003833 6.0e-15 84.3 49 73.5
CiPaw.14G004400 Carya illinoinensis HOM05D000916 ORTHO05D003833 7.9e-15 84.0 59 64.4
COL.COLO4_12325 Corchorus olitorius HOM05D000916 ORTHO05D003833 7.9e-15 84.0 48 70.8
Duzib138G1830 Durio zibethinus HOM05D000916 ORTHO05D003833 7.9e-15 84.0 48 70.8
Medtr3g034670 Medicago truncatula HOM05D000916 ORTHO05D003833 7.9e-15 84.0 61 62.3
Phvul.011G013400 Phaseolus vulgaris HOM05D000916 ORTHO05D003833 7.9e-15 84.0 51 72.5
Gohir.D12G102900 Gossypium hirsutum HOM05D000916 ORTHO05D003833 1.0e-14 83.6 48 70.8
Gorai.008G112100 Gossypium raimondii HOM05D000916 ORTHO05D003833 1.0e-14 83.6 48 70.8
Nitab4.5_0002187g0050 Nicotiana tabacum HOM05D000916 ORTHO05D003833 1.0e-14 83.6 48 75.0
Os06g0354700 Oryza sativa ssp. japonica HOM05D000916 ORTHO05D003833 1.0e-14 83.6 59 61.0
Hund02666 Selenicereus undatus HOM05D000916 ORTHO05D003833 1.0e-14 83.6 58 60.3
VMungo1127G2227 Vigna mungo HOM05D000916 ORTHO05D003833 1.0e-14 83.6 51 72.5
Actinidia21532 Actinidia chinensis HOM05D000916 ORTHO05D003833 1.3e-14 83.2 46 78.3
CANSAT80G0128 Cannabis sativa HOM05D000916 ORTHO05D003833 1.3e-14 83.2 45 82.2
Hma1.2p1_0269F.1_g107780 Hydrangea macrophylla HOM05D000916 ORTHO05D003833 1.3e-14 83.2 45 82.2
AUR62023112 Chenopodium quinoa HOM05D000916 ORTHO05D003833 1.8e-14 82.8 65 60.0
MD02G1299000 Malus domestica HOM05D000916 ORTHO05D003833 1.8e-14 82.8 45 77.8
Nitab4.5_0008059g0020 Nicotiana tabacum HOM05D000916 ORTHO05D003833 1.8e-14 82.8 46 76.1
Peaxi162Scf00071g00942 Petunia axillaris HOM05D000916 ORTHO05D003833 1.8e-14 82.8 70 54.3
Prupe.2G025100 Prunus persica HOM05D000916 ORTHO05D003833 1.8e-14 82.8 48 70.8
CAN.G410.9 Capsicum annuum HOM05D000916 ORTHO05D003833 2.3e-14 82.4 48 72.9
CDE08G0464 Ceratophyllum demersum HOM05D000916 ORTHO05D003833 2.3e-14 82.4 89 50.6
CARHR199640 Cardamine hirsuta HOM05D000916 ORTHO05D003833 3.0e-14 82.0 45 73.3
Cpa.g.sc197.25 Carica papaya HOM05D000916 ORTHO05D003833 3.0e-14 82.0 48 70.8
Lalb_Chr04g0263761 Lupinus albus HOM05D000916 ORTHO05D003833 3.0e-14 82.0 59 64.4
CSS0019872 Camellia sinensis var. sinensis HOM05D000916 ORTHO05D003833 3.9e-14 81.6 48 72.9
Dinv07420 Davidia involucrata HOM05D000916 ORTHO05D003833 3.9e-14 81.6 48 72.9
MD07G1025100 Malus domestica HOM05D000916 ORTHO05D003833 3.9e-14 81.6 48 70.8
Nitab4.5_0000087g0130 Nicotiana tabacum HOM05D000916 ORTHO05D003833 3.9e-14 81.6 46 73.9
PSO339G1599 Papaver somniferum HOM05D000916 ORTHO05D003833 3.9e-14 81.6 46 76.1
CiPaw.13G008700 Carya illinoinensis HOM05D000916 ORTHO05D003833 5.1e-14 81.3 45 77.8
AUR62009433 Chenopodium quinoa HOM05D000916 ORTHO05D003833 5.1e-14 81.3 62 61.3
FAN01G1598 Fragaria x ananassa HOM05D000916 ORTHO05D003833 6.7e-14 80.9 48 70.8
Lsat_1_v5_gn_1_100221 Lactuca sativa HOM05D000916 ORTHO05D003833 6.7e-14 80.9 51 66.7
Lj9A642T54 Lonicera japonica HOM05D000916 ORTHO05D003833 6.7e-14 80.9 51 68.6
Oeu014600.1 Olea europaea HOM05D000916 ORTHO05D003833 8.7e-14 80.5 48 70.8
PGSC0003DMG400006768 Solanum tuberosum HOM05D000916 ORTHO05D003833 8.7e-14 80.5 48 70.8
MSTRG.17001 Avicennia marina HOM05D000916 ORTHO05D003833 1.1e-13 80.1 45 73.3
Solyc01g088090.3 Solanum lycopersicum HOM05D000916 ORTHO05D003833 1.1e-13 80.1 73 53.4
Gohir.A12G100000 Gossypium hirsutum HOM05D000916 ORTHO05D003833 1.5e-13 79.7 48 66.7
Sopen01g034960 Solanum pennellii HOM05D000916 ORTHO05D003833 1.5e-13 79.7 73 53.4
CDE09G0790 Ceratophyllum demersum HOM05D000916 ORTHO05D003833 1.9e-13 79.3 48 70.8
Gohir.D08G162200 Gossypium hirsutum HOM05D000916 ORTHO05D003833 1.9e-13 79.3 48 68.8
Peaxi162Scf01108g00012 Petunia axillaris HOM05D000916 ORTHO05D003833 1.9e-13 79.3 74 52.7
Phvul.005G035700 Phaseolus vulgaris HOM05D000916 ORTHO05D003833 1.9e-13 79.3 65 58.5
AL6G24420 Arabidopsis lyrata HOM05D000916 ORTHO05D003833 2.5e-13 79.0 45 68.9
AT5G13800 Arabidopsis thaliana HOM05D000916 ORTHO05D003833 2.5e-13 79.0 45 68.9
Carub.0006s1198 Capsella rubella HOM05D000916 ORTHO05D003833 2.5e-13 79.0 45 68.9
Gohir.A08G141100 Gossypium hirsutum HOM05D000916 ORTHO05D003833 2.5e-13 79.0 48 66.7
Gorai.004G168500 Gossypium raimondii HOM05D000916 ORTHO05D003833 2.5e-13 79.0 48 66.7
Potri.009G054800 Populus trichocarpa HOM05D000916 ORTHO05D003833 2.5e-13 79.0 46 69.6
Sc11g0008990 Simmondsia chinensis HOM05D000916 ORTHO05D003833 2.5e-13 79.0 45 75.6
VMungo1080G0664 Vigna mungo HOM05D000916 ORTHO05D003833 2.5e-13 79.0 45 71.1
arahy.Tifrunner.gnm1.ann1.Y4Z44P Arachis hypogaea HOM05D000916 ORTHO05D003833 3.3e-13 78.6 45 75.6
MSTRG.5048 Avicennia marina HOM05D000916 ORTHO05D003833 3.3e-13 78.6 46 76.1
ECA248G0906 Erigeron canadensis HOM05D000916 ORTHO05D003833 3.3e-13 78.6 46 69.6
ATR0320G046 Amborella trichopoda HOM05D000916 ORTHO05D003833 4.3e-13 78.2 45 71.1
arahy.Tifrunner.gnm1.ann1.S8KRYV Arachis hypogaea HOM05D000916 ORTHO05D003833 4.3e-13 78.2 45 73.3
arahy.Tifrunner.gnm1.ann1.YN40WG Arachis hypogaea HOM05D000916 ORTHO05D003833 4.3e-13 78.2 45 73.3
Atru.chr11.2554 Acer truncatum HOM05D000916 ORTHO05D003833 5.6e-13 77.8 45 73.3
DCAR_031814 Daucus carota HOM05D000916 ORTHO05D003833 5.6e-13 77.8 61 59.0
Glyma.11G157976 Glycine max HOM05D000916 ORTHO05D003833 5.6e-13 77.8 45 71.1
SalBow5G3829 Salvia bowleyana HOM05D000916 ORTHO05D003833 5.6e-13 77.8 48 72.9
Sp6g30220 Schrenkiella parvula HOM05D000916 ORTHO05D003833 5.6e-13 77.8 50 62.0
SGA_v2.0_scaffold119G32770 Striga asiatica HOM05D000916 ORTHO05D003833 5.6e-13 77.8 46 69.6
TWI73G1133 Tripterygium wilfordii HOM05D000916 ORTHO05D003833 5.6e-13 77.8 48 70.8
Aa31LG2G15250 Aethionema arabicum HOM05D000916 ORTHO05D003833 7.4e-13 77.4 74 43.2
BcaNung04182 Brassica carinata HOM05D000916 ORTHO05D003833 7.4e-13 77.4 45 68.9
A02p02190 Brassica napus HOM05D000916 ORTHO05D003833 7.4e-13 77.4 50 62.0
BraA02t05192Z Brassica rapa HOM05D000916 ORTHO05D003833 7.4e-13 77.4 50 62.0
Migut.B01255 Erythranthe guttata HOM05D000916 ORTHO05D003833 7.4e-13 77.4 45 71.1
Sabra09G0040100 Salix brachista HOM05D000916 ORTHO05D003833 1.3e-12 76.6 46 73.9
HPP92_011273 Vanilla planifolia HOM05D000916 ORTHO05D003833 1.3e-12 76.6 45 71.1
HPP92_011294 Vanilla planifolia HOM05D000916 ORTHO05D003833 1.3e-12 76.6 45 71.1
Thhalv10013390m.g Eutrema salsugineum HOM05D000916 ORTHO05D003833 1.6e-12 76.3 45 66.7
THA.LOC104827431 Tarenaya hassleriana HOM05D000916 ORTHO05D003833 1.6e-12 76.3 45 66.7
THA.LOC104819108 Tarenaya hassleriana HOM05D000916 ORTHO05D003833 2.1e-12 75.9 45 66.7
Ciclev10031731m.g Citrus clementina HOM05D000916 ORTHO05D003833 2.8e-12 75.5 48 64.6
HanXRQChr05g0159011 Helianthus annuus HOM05D000916 ORTHO05D003833 2.8e-12 75.5 45 68.9
BcaB01g05336 Brassica carinata HOM05D000916 ORTHO05D003833 3.7e-12 75.1 45 64.4
A03p06180 Brassica napus HOM05D000916 ORTHO05D003833 3.7e-12 75.1 45 64.4
BraA03t09952Z Brassica rapa HOM05D000916 ORTHO05D003833 3.7e-12 75.1 45 64.4
C02p06440 Brassica napus HOM05D000916 ORTHO05D003833 6.2e-12 74.3 50 60.0
C03p07190 Brassica napus HOM05D000916 ORTHO05D003833 6.2e-12 74.3 45 64.4
BolC2t06590H Brassica oleracea HOM05D000916 ORTHO05D003833 6.2e-12 74.3 50 60.0
BolC3t13220H Brassica oleracea HOM05D000916 ORTHO05D003833 6.2e-12 74.3 45 64.4
Duzib133G0052 Durio zibethinus HOM05D000916 ORTHO05D003833 8.2e-12 73.9 58 58.6
Zm00001eb231810 Zea mays HOM05D000916 ORTHO05D003833 8.2e-12 73.9 59 54.2
Migut.N01808 Erythranthe guttata HOM05D000916 ORTHO05D003833 2.4e-11 72.4 70 51.4
Haze_11740 Corylus avellana HOM05D000916 ORTHO05D003833 9.0e-11 70.5 62 50.0
unitig_61.g26130 Utricularia gibba HOM05D000916 ORTHO05D003833 2.6e-10 68.9 61 52.5
Pp3c25_9360 Physcomitrium patens HOM05D000916 ORTHO05D003833 3.4e-10 68.6 45 64.4
unitig_0.g979 Utricularia gibba HOM05D000916 ORTHO05D003833 3.4e-10 68.6 45 60.0
Actinidia20653 Actinidia chinensis HOM05D000916 ORTHO05D003833 7.6e-10 67.4 60 55.0
arahy.Tifrunner.gnm1.ann1.VX3IL8 Arachis hypogaea HOM05D000916 ORTHO05D038843 2.1e-07 59.3 31 74.2


User provided reference genes

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