Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0178 Trochodendron aralioides HOM05D002943 ORTHO05D002685 1.1e-39 166.0 78 100.0
Cc03_g10690 Coffea canephora HOM05D002943 ORTHO05D002685 1.7e-14 82.4 49 75.5
arahy.Tifrunner.gnm1.ann1.HA7VEA Arachis hypogaea HOM05D001631 ORTHO05D003183 6.3e-14 80.5 79 51.9
arahy.Tifrunner.gnm1.ann1.NISQ8K Arachis hypogaea HOM05D002943 ORTHO05D002685 6.3e-14 80.5 49 71.4
Nitab4.5_0005971g0020 Nicotiana tabacum HOM05D002943 ORTHO05D002685 8.3e-14 80.1 46 82.6
GSVIVG01001162001 Vitis vinifera HOM05D002943 ORTHO05D002685 8.3e-14 80.1 49 73.5
Hma1.2p1_0667F.1_g199660 Hydrangea macrophylla HOM05D002943 ORTHO05D002685 1.1e-13 79.7 46 82.6
Peaxi162Scf00641g00318 Petunia axillaris HOM05D002943 ORTHO05D002685 1.1e-13 79.7 44 86.4
Nitab4.5_0004318g0010 Nicotiana tabacum HOM05D002943 ORTHO05D002685 2.4e-13 78.6 45 82.2
SalBow4G2517 Salvia bowleyana HOM05D002943 ORTHO05D002685 7.0e-13 77.0 43 83.7
Nn4g26296 Nelumbo nucifera HOM05D002943 ORTHO05D002685 1.6e-12 75.9 41 87.8
Cfa006157 Carpinus fangiana HOM05D002943 ORTHO05D002685 2.7e-12 75.1 47 74.5
Medtr1g072140 Medicago truncatula HOM05D002943 ORTHO05D002685 2.7e-12 75.1 43 81.4
Haze_04694 Corylus avellana HOM05D002943 ORTHO05D002685 7.8e-12 73.6 47 72.3
Duzib138G1878 Durio zibethinus HOM05D002943 ORTHO05D002685 7.8e-12 73.6 39 87.2
PSO210G2619 Papaver somniferum HOM05D002943 ORTHO05D002685 7.8e-12 73.6 40 87.5
PSO761G0421 Papaver somniferum HOM05D002943 ORTHO05D002685 7.8e-12 73.6 40 87.5
Phvul.007G172600 Phaseolus vulgaris HOM05D002943 ORTHO05D002685 1.0e-11 73.2 43 81.4
TPR.G9116 Trifolium pratense HOM05D002943 ORTHO05D002685 1.0e-11 73.2 43 81.4
VMungo0720G0375 Vigna mungo HOM05D002943 ORTHO05D002685 1.0e-11 73.2 43 81.4
Psat6g060720 Pisum sativum HOM05D002943 ORTHO05D002685 1.3e-11 72.8 43 76.7
CANSAT56G2303 Cannabis sativa HOM05D002943 ORTHO05D002685 1.7e-11 72.4 39 87.2
ClCG09G007120 Citrullus lanatus HOM05D002943 ORTHO05D002685 1.7e-11 72.4 40 85.0
CsaV3_7G028040 Cucumis sativus L. HOM05D002943 ORTHO05D002685 1.7e-11 72.4 40 85.0
Cpa.g.sc52.53 Carica papaya HOM05D002943 ORTHO05D002685 2.9e-11 71.6 40 85.0
Ca_09752_v3 Cicer arietinum L. HOM05D002943 ORTHO05D002685 2.9e-11 71.6 41 80.5
Gohir.A08G045160 Gossypium hirsutum HOM05D002943 ORTHO05D002685 3.9e-11 71.2 39 87.2
Gohir.D08G055200 Gossypium hirsutum HOM05D002943 ORTHO05D002685 3.9e-11 71.2 39 87.2
Gorai.004G055700 Gossypium raimondii HOM05D002943 ORTHO05D002685 3.9e-11 71.2 39 87.2
Lalb_Chr21g0306431 Lupinus albus HOM05D002943 ORTHO05D002685 3.9e-11 71.2 40 82.5
MBI04_g36449_MAGBIO Magnolia biondii HOM05D002943 ORTHO05D002685 3.9e-11 71.2 40 82.5
Prupe.8G239500 Prunus persica HOM05D002943 ORTHO05D002685 3.9e-11 71.2 40 80.0
Thecc.01G277000 Theobroma cacao HOM05D002943 ORTHO05D002685 3.9e-11 71.2 39 87.2
TAR629G3468 Trochodendron aralioides HOM05D002943 ORTHO05D002685 3.9e-11 71.2 38 86.8
COL.COLO4_09075 Corchorus olitorius HOM05D002943 ORTHO05D002685 5.0e-11 70.9 40 85.0
Lsat_1_v5_gn_4_28161 Lactuca sativa HOM05D002943 ORTHO05D002685 6.6e-11 70.5 49 65.3
Atru.chr5.1459 Acer truncatum HOM05D002943 ORTHO05D002685 1.5e-10 69.3 41 80.5
QL12p021366 Quercus lobata HOM05D002943 ORTHO05D002685 1.5e-10 69.3 42 81.0
Glyma.02G146800 Glycine max HOM05D002943 ORTHO05D002685 3.3e-10 68.2 41 75.6
THA.LOC104815938 Tarenaya hassleriana HOM05D002943 ORTHO05D002685 3.3e-10 68.2 39 79.5
TAR636G0694 Trochodendron aralioides HOM05D002943 ORTHO05D002685 4.3e-10 67.8 41 82.9
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 5.6e-10 67.4 38 78.9
Eucgr.K03366 Eucalyptus grandis HOM05D002943 ORTHO05D002685 7.3e-10 67.0 38 81.6
Sed0026548 Sechium edule HOM05D002943 ORTHO05D002685 7.3e-10 67.0 37 83.8
PGR044G0058 Punica granatum HOM05D002943 ORTHO05D002685 1.6e-09 65.9 40 82.5
AL6G50270 Arabidopsis lyrata HOM05D002943 ORTHO05D002685 2.8e-09 65.1 40 80.0
AT4G02730 Arabidopsis thaliana HOM05D002943 ORTHO05D002685 2.8e-09 65.1 40 80.0
CARHR251070 Cardamine hirsuta HOM05D002943 ORTHO05D002685 2.8e-09 65.1 40 80.0
RcHm_v2.0_Chr6g0290821 Rosa chinensis HOM05D002943 ORTHO05D002685 2.8e-09 65.1 38 81.6
MD03G1263200 Malus domestica HOM05D002943 ORTHO05D002685 3.6e-09 64.7 42 73.8
Carub.0006s3437 Capsella rubella HOM05D002943 ORTHO05D002685 6.2e-09 63.9 40 77.5
BcaB05g23663 Brassica carinata HOM05D002943 ORTHO05D002685 1.0e-08 63.2 39 79.5
Thhalv10028762m.g Eutrema salsugineum HOM05D002943 ORTHO05D002685 1.0e-08 63.2 39 79.5
Sp6g02690 Schrenkiella parvula HOM05D002943 ORTHO05D002685 1.0e-08 63.2 39 79.5
Lj5g0020766 Lotus japonicus HOM05D002943 ORTHO05D002685 1.4e-08 62.8 38 71.1
VMungo0464G1999 Vigna mungo HOM05D009278 ORTHO05D002685 1.4e-08 62.8 41 78.0
MELO3C015824.2 Cucumis melo HOM05D002943 ORTHO05D002685 3.1e-08 61.6 45 71.1
VMungo0251G3091 Vigna mungo HOM05D002943 ORTHO05D020395 4.0e-08 61.2 46 71.7
CSS0032407 Camellia sinensis var. sinensis HOM05D002943 ORTHO05D002685 5.2e-08 60.8 57 54.4
AUR62000261 Chenopodium quinoa HOM05D002943 ORTHO05D002685 4.4e-07 57.8 39 66.7
ECA247G3845 Erigeron canadensis HOM05D002943 ORTHO05D002685 5.8e-07 57.4 41 70.7
A06p18050 Brassica napus HOM05D009278 ORTHO05D002685 2.2e-06 55.5 41 63.4
Dinv34766 Davidia involucrata HOM05D002943 ORTHO05D002685 2.9e-06 55.1 43 67.4
Thhalv10023908m.g Eutrema salsugineum HOM05D067168 ORTHO05D020395 6.4e-06 53.9 41 68.3
arahy.Tifrunner.gnm1.ann1.FR17PC Arachis hypogaea HOM05D002943 ORTHO05D002685 8.3e-06 53.5 34 73.5
vmacro02582 Vaccinium macrocarpon HOM05D002943 ORTHO05D002685 8.3e-06 53.5 36 72.2


User provided reference genes

Program Settings