Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G2511 Trochodendron aralioides HOM05D001780 ORTHO05D004373 6.4e-120 434.1 219 100.0
TAR362G1083 Trochodendron aralioides HOM05D001780 ORTHO05D004373 9.3e-63 244.2 177 74.6
MBI18_g09771_MAGBIO Magnolia biondii HOM05D001780 ORTHO05D004373 5.5e-55 218.4 176 65.9
Dinv15122 Davidia involucrata HOM05D001780 ORTHO05D004373 1.3e-53 213.8 180 64.4
Actinidia34617 Actinidia chinensis HOM05D001780 ORTHO05D004373 7.4e-52 208.0 175 61.1
Thecc.05G003300 Theobroma cacao HOM05D001780 ORTHO05D004373 7.4e-52 208.0 178 60.7
GSVIVG01010735001 Vitis vinifera HOM05D001780 ORTHO05D004373 2.2e-51 206.5 181 61.3
COL.COLO4_14418 Corchorus olitorius HOM05D001780 ORTHO05D004373 3.7e-51 205.7 178 57.9
COL.COLO4_24691 Corchorus olitorius HOM05D001780 ORTHO05D004373 3.1e-50 202.6 178 57.3
Actinidia35963 Actinidia chinensis HOM05D001780 ORTHO05D004373 1.2e-49 200.7 175 61.1
Potri.017G033200 Populus trichocarpa HOM05D001780 ORTHO05D004373 2.6e-49 199.5 177 62.7
Dinv33217 Davidia involucrata HOM05D001780 ORTHO05D004373 4.5e-49 198.7 170 62.9
Atru.chr3.1561 Acer truncatum HOM05D001780 ORTHO05D004373 5.9e-49 198.4 176 59.1
Atru.chr3.1583 Acer truncatum HOM05D001780 ORTHO05D004373 5.9e-49 198.4 176 59.1
Duzib106G1771 Durio zibethinus HOM05D001780 ORTHO05D004373 7.7e-49 198.0 178 59.0
PSO541G0190 Papaver somniferum HOM05D001780 ORTHO05D004373 1.7e-48 196.8 175 60.0
Aqoxy7G01270 Aquilegia oxysepala HOM05D001780 ORTHO05D004373 2.9e-48 196.1 176 59.7
MD04G1037200 Malus domestica HOM05D001780 ORTHO05D004373 6.5e-48 194.9 181 56.4
THA.LOC104803625 Tarenaya hassleriana HOM05D001780 ORTHO05D004373 6.5e-48 194.9 176 59.1
Nitab4.5_0001198g0100 Nicotiana tabacum HOM05D001780 ORTHO05D004373 1.4e-47 193.7 176 55.1
PSO063G4644 Papaver somniferum HOM05D001780 ORTHO05D004373 2.5e-47 193.0 175 59.4
Gohir.A01G231000 Gossypium hirsutum HOM05D001780 ORTHO05D004373 3.2e-47 192.6 179 57.0
Lj6C607G11 Lonicera japonica HOM05D001780 ORTHO05D004373 3.2e-47 192.6 175 57.1
Hma1.2p1_0597F.1_g186560 Hydrangea macrophylla HOM05D001780 ORTHO05D004373 5.5e-47 191.8 176 59.7
Solyc11g012140.2 Solanum lycopersicum HOM05D001780 ORTHO05D004373 5.5e-47 191.8 177 54.2
QL10p047812 Quercus lobata HOM05D001780 ORTHO05D004373 9.4e-47 191.0 175 56.6
Oeu061694.1 Olea europaea HOM05D001780 ORTHO05D004373 1.2e-46 190.7 178 55.6
Sopen11g006930 Solanum pennellii HOM05D001780 ORTHO05D004373 1.2e-46 190.7 176 53.4
PGSC0003DMG400013343 Solanum tuberosum HOM05D001780 ORTHO05D004373 1.2e-46 190.7 175 54.3
Manes.04G040600 Manihot esculenta HOM05D001780 ORTHO05D004373 1.6e-46 190.3 177 56.5
Sabra17G0020800 Salix brachista HOM05D001780 ORTHO05D004373 2.1e-46 189.9 175 60.0
CANSAT78G0939 Cannabis sativa HOM05D001780 ORTHO05D004373 4.6e-46 188.7 181 57.5
PSO675G8171 Papaver somniferum HOM05D001780 ORTHO05D004373 4.6e-46 188.7 175 59.4
Cc04_g11170 Coffea canephora HOM05D001780 ORTHO05D004373 7.9e-46 188.0 172 57.6
Lsat_1_v5_gn_5_77240 Lactuca sativa HOM05D001780 ORTHO05D004373 7.9e-46 188.0 174 55.2
Atru.chr12.1705 Acer truncatum HOM05D001780 ORTHO05D004373 1.4e-45 187.2 169 59.8
Dinv44242 Davidia involucrata HOM05D001780 ORTHO05D004373 1.4e-45 187.2 171 59.6
Gohir.D01G221100 Gossypium hirsutum HOM05D001780 ORTHO05D004373 1.4e-45 187.2 179 55.9
Gorai.002G267700 Gossypium raimondii HOM05D001780 ORTHO05D004373 1.4e-45 187.2 179 55.9
MSTRG.21338 Avicennia marina HOM05D001780 ORTHO05D004373 1.8e-45 186.8 175 54.9
Sabra07G0102600 Salix brachista HOM05D001780 ORTHO05D004373 1.8e-45 186.8 200 53.5
CiPaw.01G102300 Carya illinoinensis HOM05D001780 ORTHO05D004373 2.3e-45 186.4 175 56.6
Nn1g08648 Nelumbo nucifera HOM05D001780 ORTHO05D004373 2.3e-45 186.4 161 63.4
Oeu025915.1 Olea europaea HOM05D001780 ORTHO05D004373 2.3e-45 186.4 176 55.7
CDE05G1969 Ceratophyllum demersum HOM05D001780 ORTHO05D004373 3.0e-45 186.0 175 57.1
ATR0789G163 Amborella trichopoda HOM05D001780 ORTHO05D004373 3.3e-44 182.6 176 55.1
A04p14990 Brassica napus HOM05D001780 ORTHO05D004373 4.4e-44 182.2 174 56.3
Cfa015768 Carpinus fangiana HOM05D001780 ORTHO05D004373 4.4e-44 182.2 171 56.7
Sc20g0004730 Simmondsia chinensis HOM05D001780 ORTHO05D004373 5.7e-44 181.8 176 51.7
Thhalv10027624m.g Eutrema salsugineum HOM05D001780 ORTHO05D004373 7.4e-44 181.4 177 55.9
RcHm_v2.0_Chr4g0408181 Rosa chinensis HOM05D001780 ORTHO05D004373 7.4e-44 181.4 176 52.3
Lj3g0013099 Lotus japonicus HOM05D001780 ORTHO05D004373 9.7e-44 181.0 176 54.5
MELO3C017728.2 Cucumis melo HOM05D001780 ORTHO05D004373 1.3e-43 180.6 176 52.8
BcaNung01700 Brassica carinata HOM05D001780 ORTHO05D004373 1.7e-43 180.3 174 55.2
DCAR_019070 Daucus carota HOM05D001780 ORTHO05D004373 2.2e-43 179.9 170 54.7
Peaxi162Scf00558g00043 Petunia axillaris HOM05D001780 ORTHO05D004373 2.8e-43 179.5 175 52.6
SGA_v2.0_scaffold29G12214 Striga asiatica HOM05D001780 ORTHO05D004373 4.8e-43 178.7 175 52.6
BcaC02g08915 Brassica carinata HOM05D001780 ORTHO05D004373 8.2e-43 177.9 174 55.2
C04p49170 Brassica napus HOM05D001780 ORTHO05D004373 8.2e-43 177.9 174 55.2
BolC4t26502H Brassica oleracea HOM05D001780 ORTHO05D004373 8.2e-43 177.9 174 55.2
BcaB06g27675 Brassica carinata HOM05D001780 ORTHO05D004373 1.1e-42 177.6 174 55.7
CsaV3_4G003190 Cucumis sativus L. HOM05D001780 ORTHO05D004373 1.1e-42 177.6 176 52.3
Sp7g00280 Schrenkiella parvula HOM05D001780 ORTHO05D004373 1.1e-42 177.6 172 55.8
arahy.Tifrunner.gnm1.ann1.05K2HA Arachis hypogaea HOM05D001780 ORTHO05D004373 1.4e-42 177.2 173 56.1
arahy.Tifrunner.gnm1.ann1.AHZV2Y Arachis hypogaea HOM05D001780 ORTHO05D004373 1.4e-42 177.2 173 56.1
ClCG07G015560 Citrullus lanatus HOM05D001780 ORTHO05D004373 1.4e-42 177.2 176 51.1
HanXRQChr10g0310431 Helianthus annuus HOM05D001780 ORTHO05D004373 1.4e-42 177.2 175 54.3
FAN17G0725 Fragaria x ananassa HOM05D001780 ORTHO05D004373 1.8e-42 176.8 180 52.8
Lalb_Chr09g0320441 Lupinus albus HOM05D001780 ORTHO05D004373 1.8e-42 176.8 173 56.6
Ca_26060_v3 Cicer arietinum L. HOM05D001780 ORTHO05D004373 3.1e-42 176.0 177 53.1
Glyma.12G020700 Glycine max HOM05D001780 ORTHO05D004373 3.1e-42 176.0 176 54.5
Medtr4g076850 Medicago truncatula HOM05D001780 ORTHO05D004373 3.1e-42 176.0 177 53.1
FvH4_4g11470 Fragaria vesca HOM05D001780 ORTHO05D004373 4.1e-42 175.6 180 53.3
Psat7g172640 Pisum sativum HOM05D001780 ORTHO05D004373 4.1e-42 175.6 176 53.4
AL7G50050 Arabidopsis lyrata HOM05D001780 ORTHO05D004373 5.3e-42 175.3 175 54.9
Sed0001787 Sechium edule HOM05D001780 ORTHO05D004373 5.3e-42 175.3 176 51.1
Aa31LG10G13700 Aethionema arabicum HOM05D001780 ORTHO05D004373 6.9e-42 174.9 175 52.0
PGR142G2637 Punica granatum HOM05D001780 ORTHO05D004373 9.1e-42 174.5 176 54.5
TPR.G13745 Trifolium pratense HOM05D001780 ORTHO05D004373 9.1e-42 174.5 177 52.5
AL6G44170 Arabidopsis lyrata HOM05D001780 ORTHO05D004373 1.2e-41 174.1 179 52.0
FAN22G0035 Fragaria x ananassa HOM05D001780 ORTHO05D004373 1.2e-41 174.1 177 53.1
BraA04t17141Z Brassica rapa HOM05D001780 ORTHO05D004373 2.0e-41 173.3 174 53.4
Carub.0006s2892 Capsella rubella HOM05D001780 ORTHO05D004373 2.0e-41 173.3 175 52.6
FAN07G0072 Fragaria x ananassa HOM05D001780 ORTHO05D004373 2.0e-41 173.3 179 52.5
Lsat_1_v5_gn_5_76161 Lactuca sativa HOM05D001780 ORTHO05D004373 3.4e-41 172.6 170 54.1
unitig_0.g306 Utricularia gibba HOM05D001780 ORTHO05D004373 3.4e-41 172.6 171 52.0
TWI63G0569 Tripterygium wilfordii HOM05D001780 ORTHO05D004373 4.5e-41 172.2 175 53.7
Migut.D00680 Erythranthe guttata HOM05D001780 ORTHO05D004373 1.0e-40 171.0 175 51.4
Phvul.011G023400 Phaseolus vulgaris HOM05D001780 ORTHO05D004373 2.2e-40 169.9 176 52.8
Glyma.11G094300 Glycine max HOM05D001780 ORTHO05D004373 3.8e-40 169.1 176 52.3
CARHR218340 Cardamine hirsuta HOM05D001780 ORTHO05D004373 5.0e-40 168.7 175 51.4
AUR62002268 Chenopodium quinoa HOM05D001780 ORTHO05D004373 5.0e-40 168.7 177 50.8
VMungo1127G1244 Vigna mungo HOM05D001780 ORTHO05D004373 5.0e-40 168.7 176 52.3
AT4G10320 Arabidopsis thaliana HOM05D001780 ORTHO05D004373 8.5e-40 167.9 175 51.4
TWI56G0090 Tripterygium wilfordii HOM05D001780 ORTHO05D004373 1.1e-39 167.5 169 53.8
Rhsim05G0075700 Rhododendron simsii HOM05D001780 ORTHO05D004373 1.4e-39 167.2 179 54.2
EL10Ac3g05575 Beta vulgaris HOM05D001780 ORTHO05D004373 1.2e-38 164.1 176 50.6
arahy.Tifrunner.gnm1.ann1.NNH8AZ Arachis hypogaea HOM05D001780 ORTHO05D004373 7.9e-38 161.4 184 48.9
vmacro00605 Vaccinium macrocarpon HOM05D001780 ORTHO05D004373 1.8e-37 160.2 173 53.2
Carub.0003s2335 Capsella rubella HOM05D001780 ORTHO05D004373 3.9e-37 159.1 194 46.4
ECA234G4143 Erigeron canadensis HOM05D001780 ORTHO05D004373 2.0e-36 156.8 176 47.2
AUR62015426 Chenopodium quinoa HOM05D001780 ORTHO05D004373 6.3e-35 151.8 163 49.7
Ciclev10018576m.g Citrus clementina HOM05D001780 ORTHO05D004373 3.5e-33 146.0 137 58.4
Zm00001eb386920 Zea mays HOM05D001780 ORTHO05D004373 3.8e-32 142.5 176 43.2
Zm00001eb275200 Zea mays HOM05D001780 ORTHO05D004373 6.5e-32 141.7 176 43.2
HPP92_012342 Vanilla planifolia HOM05D001780 ORTHO05D004373 1.8e-29 133.7 177 40.7
AagrBONN_evm.TU.Sc2ySwM_362.2885 Anthoceros agrestis HOM05D001780 ORTHO05D004373 2.4e-26 123.2 178 40.4
Lsat_1_v5_gn_5_76141 Lactuca sativa HOM05D001780 ORTHO05D004373 7.0e-26 121.7 210 40.0
Hund03144 Selenicereus undatus HOM05D001780 ORTHO05D004373 2.7e-25 119.8 143 47.6
Haze_00734 Corylus avellana HOM05D001780 ORTHO05D004373 3.5e-25 119.4 181 42.0
Nitab4.5_0000143g0350 Nicotiana tabacum HOM05D001780 ORTHO05D004373 3.5e-25 119.4 174 40.8
CBR_g17670 Chara braunii HOM05D001780 ORTHO05D004373 1.0e-24 117.9 179 40.2
BraA03t14408Z Brassica rapa HOM05D001780 ORTHO05D004373 9.8e-20 101.3 100 54.0
BolC7t45663H Brassica oleracea HOM05D001780 ORTHO05D004373 1.3e-19 100.9 102 53.9
C07p51720 Brassica napus HOM05D001780 ORTHO05D004373 1.7e-19 100.5 100 55.0
C07p51730 Brassica napus HOM05D001780 ORTHO05D004373 1.7e-19 100.5 100 55.0
A03p53410 Brassica napus HOM05D001780 ORTHO05D004373 2.2e-19 100.1 100 54.0
Mapoly0045s0031 Marchantia polymorpha HOM05D001780 ORTHO05D004373 4.8e-19 99.0 172 35.5
BcaNung00801 Brassica carinata HOM05D001780 ORTHO05D004373 1.1e-18 97.8 98 54.1
Prupe.1G186600 Prunus persica HOM05D001780 ORTHO05D004373 1.1e-18 97.8 72 66.7
Eucgr.H00406 Eucalyptus grandis HOM05D001780 ORTHO05D004373 1.8e-18 97.1 77 62.3
SMO200G0022 Selaginella moellendorffii HOM05D001780 ORTHO05D004373 1.2e-17 94.4 172 37.2
BcaNung01699 Brassica carinata HOM05D001780 ORTHO05D004373 1.6e-17 94.0 104 49.0
Eucgr.H00404 Eucalyptus grandis HOM05D001780 ORTHO05D004373 2.7e-17 93.2 66 68.2
Pp3c16_16950 Physcomitrium patens HOM05D001780 ORTHO05D004373 1.0e-16 91.3 173 33.5
CAN.G1186.25 Capsicum annuum HOM05D001780 ORTHO05D004373 5.0e-16 89.0 99 49.5
MD09G1065200 Malus domestica HOM05D001780 ORTHO05D004373 5.0e-16 89.0 99 48.5
RcHm_v2.0_Chr5g0060191 Rosa chinensis HOM05D001780 ORTHO05D004373 1.5e-15 87.4 98 48.0
BcaC06g36784 Brassica carinata HOM05D001780 ORTHO05D004373 2.5e-15 86.7 97 49.5
BcaC08g43402 Brassica carinata HOM05D001780 ORTHO05D004373 3.2e-15 86.3 97 49.5
C06p07700 Brassica napus HOM05D001780 ORTHO05D004373 3.2e-15 86.3 97 49.5
BolC6t35859H Brassica oleracea HOM05D001780 ORTHO05D004373 3.2e-15 86.3 97 49.5
COL.COLO4_09454 Corchorus olitorius HOM05D001780 ORTHO05D004373 9.5e-15 84.7 100 51.0
SEGI_14552 Sequoiadendron giganteum HOM05D001780 ORTHO05D004373 1.4e-13 80.9 66 56.1
RhsimUnG0171500 Rhododendron simsii HOM05D001780 ORTHO05D004373 3.0e-13 79.7 61 62.3
THA.LOC104798327 Tarenaya hassleriana HOM05D001780 ORTHO05D004373 2.4e-10 70.1 56 62.5
PRCOL_00001024 Prasinoderma coloniale HOM05D001780 ORTHO05D004373 4.3e-07 59.3 177 28.2


User provided reference genes

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