Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G2101 Trochodendron aralioides HOM05D006976 ORTHO05D008761 3.9e-63 244.6 120 100.0
Nn2g14969 Nelumbo nucifera HOM05D006976 ORTHO05D008761 1.4e-57 226.1 120 92.5
Gohir.D01G101878 Gossypium hirsutum HOM05D006976 ORTHO05D008761 4.3e-54 214.5 120 85.8
PSO548G0011 Papaver somniferum HOM05D006976 ORTHO05D008761 1.4e-52 209.5 120 84.2
GSVIVG01030620001 Vitis vinifera HOM05D006976 ORTHO05D008761 1.4e-52 209.5 120 86.7
HanXRQChr01g0020351 Helianthus annuus HOM05D006976 ORTHO05D008761 6.9e-52 207.2 120 85.0
HanXRQChr10g0283561 Helianthus annuus HOM05D006976 ORTHO05D008761 6.9e-52 207.2 120 85.0
HanXRQChr10g0284251 Helianthus annuus HOM05D006976 ORTHO05D008761 6.9e-52 207.2 120 85.0
HanXRQChr10g0289271 Helianthus annuus HOM05D006976 ORTHO05D008761 6.9e-52 207.2 120 85.0
HanXRQChr10g0318191 Helianthus annuus HOM05D006976 ORTHO05D008761 6.9e-52 207.2 120 85.0
HanXRQChr11g0326831 Helianthus annuus HOM05D006976 ORTHO05D008761 6.9e-52 207.2 120 85.0
HanXRQChr13g0421821 Helianthus annuus HOM05D006976 ORTHO05D008761 6.9e-52 207.2 120 85.0
HanXRQChr16g0528991 Helianthus annuus HOM05D006976 ORTHO05D008761 6.9e-52 207.2 120 85.0
HanXRQChr17g0548241 Helianthus annuus HOM05D006976 ORTHO05D008761 6.9e-52 207.2 120 85.0
HanXRQCPg0580041 Helianthus annuus HOM05D006976 ORTHO05D008761 6.9e-52 207.2 120 85.0
Hma1.2p1_1409F.1_g281660 Hydrangea macrophylla HOM05D006976 ORTHO05D008761 1.2e-51 206.5 120 85.8
HanXRQChr15g0497531 Helianthus annuus HOM05D006976 ORTHO05D008761 1.5e-51 206.1 120 84.2
Sed0001172 Sechium edule HOM05D006976 ORTHO05D008761 4.5e-51 204.5 120 83.3
Lj2P1239T139 Lonicera japonica HOM05D006976 ORTHO05D008761 5.9e-51 204.1 120 84.2
Eucgr.E01114 Eucalyptus grandis HOM05D006976 ORTHO05D008761 1.3e-50 203.0 120 83.3
Eucgr.E02607 Eucalyptus grandis HOM05D006976 ORTHO05D008761 1.3e-50 203.0 120 83.3
HanXRQChr11g0345161 Helianthus annuus HOM05D006976 ORTHO05D008761 1.3e-50 203.0 120 83.3
DCAR_032496 Daucus carota HOM05D006976 ORTHO05D008761 3.8e-50 201.4 120 81.7
PGR111G0047 Punica granatum HOM05D006976 ORTHO05D008761 6.5e-50 200.7 117 84.6
CAN.G129.10 Capsicum annuum HOM05D006976 ORTHO05D008761 4.2e-49 198.0 120 82.5
Potri.013G162300 Populus trichocarpa HOM05D006976 ORTHO05D008761 1.6e-48 196.1 118 80.5
Lj1P303T18 Lonicera japonica HOM05D006976 ORTHO05D008761 2.7e-48 195.3 120 80.0
RcHm_v2.0_CPg0502081 Rosa chinensis HOM05D006976 ORTHO05D008761 6.1e-48 194.1 120 79.2
Hund29806 Selenicereus undatus HOM05D000806 ORTHO05D002324 6.7e-47 190.7 120 79.2
GSVIVG01029875001 Vitis vinifera HOM05D006976 ORTHO05D008761 1.5e-46 189.5 120 80.0
SalBow1G3572 Salvia bowleyana HOM05D006976 ORTHO05D008761 2.5e-46 188.7 120 78.3
Hund07993 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.5e-46 188.7 120 78.3
Potri.016G094100 Populus trichocarpa HOM05D006976 ORTHO05D008761 3.3e-46 188.3 118 78.0
BcaC03g16543 Brassica carinata HOM05D006976 ORTHO05D008761 4.1e-44 181.4 120 73.3
C09p40240 Brassica napus HOM05D006976 ORTHO05D008761 4.1e-44 181.4 120 73.3
BolSC35t60647H Brassica oleracea HOM05D006976 ORTHO05D008761 4.1e-44 181.4 120 73.3
BolSC35t60749H Brassica oleracea HOM05D006976 ORTHO05D008761 4.1e-44 181.4 120 73.3
BolSC46t61034H Brassica oleracea HOM05D006976 ORTHO05D008761 4.1e-44 181.4 120 73.3
BolSC49t61182H Brassica oleracea HOM05D006976 ORTHO05D008761 4.1e-44 181.4 120 73.3
BraSC25t45865Z Brassica rapa HOM05D006976 ORTHO05D008761 4.1e-44 181.4 120 73.3
Solyc00g500020.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 4.1e-44 181.4 120 76.7
Solyc00g500067.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 4.1e-44 181.4 120 76.7
ATCG00530 Arabidopsis thaliana HOM05D006976 ORTHO05D008761 5.3e-44 181.0 120 73.3
CARHR282110 Cardamine hirsuta HOM05D006976 ORTHO05D008761 1.2e-43 179.9 120 72.5
CAN.G232.11 Capsicum annuum HOM05D006976 ORTHO05D008761 1.5e-43 179.5 120 75.8
Medtr5g019520 Medicago truncatula HOM05D006976 ORTHO05D008761 5.9e-43 177.6 120 73.3
Thhalv10010976m.g Eutrema salsugineum HOM05D006976 ORTHO05D008761 1.0e-42 176.8 120 71.7
Psat0s2288g0200 Pisum sativum HOM05D006976 ORTHO05D008761 3.8e-42 174.9 120 71.7
Psat0s2754g0120 Pisum sativum HOM05D000806 ORTHO05D002324 3.8e-42 174.9 120 71.7
BraA06t25422Z Brassica rapa HOM05D006976 ORTHO05D008761 1.1e-41 173.3 121 71.1
Gorai.001G104700 Gossypium raimondii HOM05D006976 ORTHO05D008761 1.4e-41 172.9 106 77.4
HPP92_028424 Vanilla planifolia HOM05D006976 ORTHO05D008761 1.6e-40 169.5 120 67.5
arahy.Tifrunner.gnm1.ann1.Z0BJS7 Arachis hypogaea HOM05D000806 ORTHO05D002324 2.7e-40 168.7 120 71.7
Hund28750 Selenicereus undatus HOM05D006976 ORTHO05D008761 3.6e-40 168.3 120 72.5
Gohir.D07G097266 Gossypium hirsutum HOM05D006976 ORTHO05D008761 4.7e-40 167.9 102 77.5
A06p23180 Brassica napus HOM05D006976 ORTHO05D008761 7.9e-40 167.2 109 73.4
CAN.G16.7 Capsicum annuum HOM05D006976 ORTHO05D008761 1.8e-39 166.0 115 72.2
BolC9t56930H Brassica oleracea HOM05D006976 ORTHO05D008761 3.9e-39 164.9 118 69.5
HPP92_022279 Vanilla planifolia HOM05D006976 ORTHO05D008761 3.9e-39 164.9 120 65.8
Oeu028777.1 Olea europaea HOM05D000806 ORTHO05D002324 2.0e-38 162.5 101 77.2
Phvul.002G278108 Phaseolus vulgaris HOM05D006976 ORTHO05D008761 2.6e-38 162.2 117 69.2
BolSC47t61096H Brassica oleracea HOM05D006976 ORTHO05D008761 7.4e-38 160.6 104 73.1
BraSC59t46590Z Brassica rapa HOM05D006976 ORTHO05D008761 1.1e-36 156.8 106 70.8
Gohir.A01G204050 Gossypium hirsutum HOM05D006976 ORTHO05D008761 4.1e-36 154.8 85 87.1
AL2G20664 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 4.5e-35 151.4 120 64.2
C02p43530 Brassica napus HOM05D006976 ORTHO05D008761 3.8e-34 148.3 120 63.3
Gohir.A09G041060 Gossypium hirsutum HOM05D006976 ORTHO05D008761 1.1e-33 146.7 83 84.3
Peaxi162Scf00021g00087 Petunia axillaris HOM05D000806 ORTHO05D002324 1.2e-32 143.3 81 86.4
Sc03g0010000 Simmondsia chinensis HOM05D006976 ORTHO05D008761 3.0e-31 138.7 77 88.3
HanXRQChr08g0209641 Helianthus annuus HOM05D006976 ORTHO05D008761 9.7e-30 133.7 76 85.5
AL2G21560 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 1.3e-29 133.3 120 57.5
Nitab4.5_0002181g0020 Nicotiana tabacum HOM05D006976 ORTHO05D008761 1.8e-28 129.4 77 80.5
Oeu039082.1 Olea europaea HOM05D006976 ORTHO05D008761 2.2e-26 122.5 84 73.8
GSVIVG01017636001 Vitis vinifera HOM05D006976 ORTHO05D008761 9.4e-25 117.1 120 58.3
Nn010s41437 Nelumbo nucifera HOM05D006976 ORTHO05D008761 2.7e-24 115.5 55 96.4
EL10Ac4g09265 Beta vulgaris HOM05D006976 ORTHO05D008761 1.5e-22 109.8 69 78.3
Peaxi162Scf00413g00828 Petunia axillaris HOM05D000806 ORTHO05D002324 1.1e-20 103.6 70 75.7
Gorai.004G088500 Gossypium raimondii HOM05D006976 ORTHO05D008761 7.0e-20 100.9 93 60.2
Gohir.D02G130401 Gossypium hirsutum HOM05D006976 ORTHO05D008761 1.0e-18 97.1 67 73.1
Lalb_Chr23g0274511 Lupinus albus HOM05D006976 ORTHO05D008761 1.0e-18 97.1 94 59.6
Gorai.005G146300 Gossypium raimondii HOM05D006976 ORTHO05D008761 1.3e-18 96.7 67 73.1
Nn010s41442 Nelumbo nucifera HOM05D006976 ORTHO05D008761 1.5e-17 93.2 49 91.8
C09p40410 Brassica napus HOM05D006976 ORTHO05D008761 3.6e-16 88.6 56 71.4
HanXRQChr02g0044891 Helianthus annuus HOM05D006976 ORTHO05D008761 5.2e-15 84.7 49 81.6
HanXRQChr05g0161171 Helianthus annuus HOM05D006976 ORTHO05D008761 2.6e-14 82.4 49 79.6
Prupe.7G029500 Prunus persica HOM05D006976 ORTHO05D008761 2.2e-13 79.3 49 75.5
Lalb_Chr03g0039211 Lupinus albus HOM05D006976 ORTHO05D008761 8.3e-13 77.4 49 73.5
BNapus_Darmor_BZH_scaffold_253p00220 Brassica napus HOM05D000806 ORTHO05D002324 1.8e-12 76.3 49 71.4
BolSC29t60590H Brassica oleracea HOM05D006976 ORTHO05D008761 1.8e-12 76.3 49 71.4
BolSC46t61001H Brassica oleracea HOM05D006976 ORTHO05D008761 1.8e-12 76.3 49 71.4
Eucgr.I02539 Eucalyptus grandis HOM05D006976 ORTHO05D008761 4.1e-12 75.1 49 73.5
MD10G1104000 Malus domestica HOM05D006976 ORTHO05D008761 1.6e-11 73.2 54 66.7
Medtr3g111320 Medicago truncatula HOM05D006976 ORTHO05D008761 3.5e-11 72.0 49 67.3
Migut.G01116 Erythranthe guttata HOM05D006976 ORTHO05D008761 4.5e-11 71.6 70 54.3
BraSC103t45467Z Brassica rapa HOM05D006976 ORTHO05D008761 7.7e-11 70.9 50 70.0
Oeu062852.1 Olea europaea HOM05D006976 ORTHO05D008761 6.6e-10 67.8 36 77.8
Lalb_Chr03g0036051 Lupinus albus HOM05D006976 ORTHO05D008761 1.1e-09 67.0 49 63.3
Oeu012774.1 Olea europaea HOM05D006976 ORTHO05D008761 4.2e-09 65.1 46 69.6
Hund10572 Selenicereus undatus HOM05D006976 ORTHO05D008761 4.2e-09 65.1 49 65.3
Nitab4.5_0007680g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 1.2e-08 63.5 45 68.9
Lalb_Chr18g0049641 Lupinus albus HOM05D006976 ORTHO05D008761 3.6e-08 62.0 120 36.7
TPR.G11768 Trifolium pratense HOM05D006976 ORTHO05D008761 4.7e-08 61.6 49 61.2
Gorai.007G243600 Gossypium raimondii HOM05D000806 ORTHO05D002324 1.8e-07 59.7 31 83.9
Nn021s41537 Nelumbo nucifera HOM05D006976 ORTHO05D008761 6.8e-07 57.8 39 64.1
HanXRQChr02g0041581 Helianthus annuus HOM05D000806 ORTHO05D002324 1.5e-06 56.6 33 81.8
Glyma.14G104700 Glycine max HOM05D006976 ORTHO05D008761 4.4e-06 55.1 32 75.0
QL93p0999_0001 Quercus lobata HOM05D006976 ORTHO05D008761 7.5e-06 54.3 30 80.0


User provided reference genes

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