Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1933 Trochodendron aralioides HOM05D009061 ORTHO05D011147 8.5e-96 353.6 170 100.0
TAR375G0259 Trochodendron aralioides HOM05D009061 ORTHO05D011147 2.3e-24 116.3 166 38.0
TAR627G1103 Trochodendron aralioides HOM05D009061 ORTHO05D011147 2.8e-22 109.4 148 43.2
TAR673G0002 Trochodendron aralioides HOM05D009061 ORTHO05D011147 1.1e-21 107.5 171 36.8
TAR629G0383 Trochodendron aralioides HOM05D001598 ORTHO05D002757 7.6e-20 101.3 132 42.4
TAR629G0045 Trochodendron aralioides HOM05D009061 ORTHO05D011147 1.7e-19 100.1 136 42.6
TAR394G0001 Trochodendron aralioides HOM05D009061 ORTHO05D011147 6.4e-19 98.2 133 39.1
TAR371G0642 Trochodendron aralioides HOM05D003182 ORTHO05D037811 1.9e-18 96.7 122 42.6
Dinv42596 Davidia involucrata HOM05D000650 ORTHO05D010020 5.4e-18 95.1 163 36.2
Glyma.14G182900 Glycine max HOM05D000650 ORTHO05D010020 4.6e-17 92.0 164 36.6
TAR628G0473 Trochodendron aralioides HOM05D009061 ORTHO05D011147 7.8e-17 91.3 142 38.0
Nitab4.5_0000131g0020 Nicotiana tabacum HOM05D000650 ORTHO05D010020 1.0e-16 90.9 162 34.0
Duzib116G0074 Durio zibethinus HOM05D000650 ORTHO05D010020 1.3e-16 90.5 162 32.7
Nn1g05637 Nelumbo nucifera HOM05D000650 ORTHO05D010020 1.3e-16 90.5 162 36.4
Thecc.08G073600 Theobroma cacao HOM05D000650 ORTHO05D010020 1.7e-16 90.1 161 32.3
TAR376G0034 Trochodendron aralioides HOM05D009061 ORTHO05D011147 1.7e-16 90.1 133 41.4
Duzib041G0043 Durio zibethinus HOM05D000650 ORTHO05D010020 2.3e-16 89.7 162 32.7
Haze_01807 Corylus avellana HOM05D000650 ORTHO05D010020 3.0e-16 89.4 162 34.6
Nn5g29828 Nelumbo nucifera HOM05D000650 ORTHO05D010020 3.0e-16 89.4 162 34.0
COL.COLO4_35274 Corchorus olitorius HOM05D000650 ORTHO05D010020 3.9e-16 89.0 162 32.7
Glyma.02G215900 Glycine max HOM05D000650 ORTHO05D010020 8.7e-16 87.8 164 34.1
Actinidia10270 Actinidia chinensis HOM05D000650 ORTHO05D010020 1.1e-15 87.4 161 34.2
Gohir.D06G030200 Gossypium hirsutum HOM05D000650 ORTHO05D010020 1.1e-15 87.4 162 33.3
Nitab4.5_0009446g0020 Nicotiana tabacum HOM05D000650 ORTHO05D010020 1.9e-15 86.7 159 34.0
Gohir.A06G031000 Gossypium hirsutum HOM05D000650 ORTHO05D010020 4.3e-15 85.5 162 33.3
Gorai.010G033200 Gossypium raimondii HOM05D000650 ORTHO05D010020 4.3e-15 85.5 162 33.3
Phvul.008G183100 Phaseolus vulgaris HOM05D000650 ORTHO05D010020 4.3e-15 85.5 164 35.4
vmacro21359 Vaccinium macrocarpon HOM05D000650 ORTHO05D010020 4.3e-15 85.5 161 34.8
VMungo0647G2271 Vigna mungo HOM05D000650 ORTHO05D010020 4.3e-15 85.5 164 35.4
Aqoxy6G00817_Aqoxy6G00818 Aquilegia oxysepala HOM05D000650 ORTHO05D010020 5.6e-15 85.1 163 33.7
Prupe.1G535200 Prunus persica HOM05D000650 ORTHO05D010020 5.6e-15 85.1 162 34.6
Psat2g064560 Pisum sativum HOM05D000650 ORTHO05D010020 7.3e-15 84.7 167 34.1
Lalb_Chr10g0102781 Lupinus albus HOM05D000650 ORTHO05D010020 1.3e-14 84.0 169 34.9
Psat2g065480 Pisum sativum HOM05D000650 ORTHO05D010020 1.3e-14 84.0 167 33.5
LjContig00408g0006573 Lotus japonicus HOM05D000650 ORTHO05D010020 1.6e-14 83.6 167 34.1
Nitab4.5_0000771g0040 Nicotiana tabacum HOM05D000650 ORTHO05D010020 1.6e-14 83.6 162 32.7
QL09p018396 Quercus lobata HOM05D000650 ORTHO05D010020 1.6e-14 83.6 163 33.7
Rhsim06G0070000 Rhododendron simsii HOM05D000650 ORTHO05D010020 1.6e-14 83.6 161 33.5
FvH4_5g34302 Fragaria vesca HOM05D000650 ORTHO05D010020 2.8e-14 82.8 162 32.7
Peaxi162Scf01112g00129 Petunia axillaris HOM05D000650 ORTHO05D010020 2.8e-14 82.8 171 34.5
RcHm_v2.0_Chr7g0234881 Rosa chinensis HOM05D000650 ORTHO05D010020 3.6e-14 82.4 162 33.3
CAN.G193.7 Capsicum annuum HOM05D000650 ORTHO05D010020 6.2e-14 81.6 162 32.7
Lj4A86T98 Lonicera japonica HOM05D000650 ORTHO05D010020 8.1e-14 81.3 163 33.1
Manes.05G189300 Manihot esculenta HOM05D000650 ORTHO05D010020 8.1e-14 81.3 162 31.5
TWI56G0415 Tripterygium wilfordii HOM05D000650 ORTHO05D010020 8.1e-14 81.3 161 34.8
Actinidia19250 Actinidia chinensis HOM05D000650 ORTHO05D010020 1.1e-13 80.9 162 35.2
Rhsim05G0206100 Rhododendron simsii HOM05D000650 ORTHO05D010020 2.4e-13 79.7 161 32.3
TAR629G1009 Trochodendron aralioides HOM05D009061 ORTHO05D011147 2.4e-13 79.7 153 35.3
Aqoxy7G01573 Aquilegia oxysepala HOM05D000650 ORTHO05D010020 3.1e-13 79.3 151 37.7
Haze_10323 Corylus avellana HOM05D000650 ORTHO05D010020 6.9e-13 78.2 164 34.8
Potri.005G152100 Populus trichocarpa HOM05D000650 ORTHO05D010020 6.9e-13 78.2 162 31.5
TAR627G0224 Trochodendron aralioides HOM05D009061 ORTHO05D011147 6.9e-13 78.2 99 44.4
TAR625G0784 Trochodendron aralioides HOM05D000650 ORTHO05D010020 9.0e-13 77.8 173 33.5
TAR636G2582 Trochodendron aralioides HOM05D009061 ORTHO05D011147 9.0e-13 77.8 161 32.3
CANSAT25G0331 Cannabis sativa HOM05D000650 ORTHO05D010020 1.2e-12 77.4 167 32.9
Haze_01803 Corylus avellana HOM05D000650 ORTHO05D010020 1.2e-12 77.4 159 34.6
Cpa.g.sc21.40 Carica papaya HOM05D000650 ORTHO05D010020 1.5e-12 77.0 162 32.7
TAR633G1693 Trochodendron aralioides HOM05D009061 ORTHO05D011147 2.0e-12 76.6 119 38.7
CSS0045659 Camellia sinensis var. sinensis HOM05D000650 ORTHO05D010020 2.6e-12 76.3 129 38.0
Aqoxy1G03910 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.8e-12 75.1 139 31.7
Aqoxy3G03539 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 5.8e-12 75.1 131 35.1
FvH4_5g34301 Fragaria vesca HOM05D000650 ORTHO05D010020 7.6e-12 74.7 152 33.6
Aqoxy2G01647 Aquilegia oxysepala HOM05D000003 ORTHO05D000283 1.3e-11 73.9 137 32.8
Haze_01707 Corylus avellana HOM05D000650 ORTHO05D010020 1.3e-11 73.9 129 35.7
Aqoxy7G01697 Aquilegia oxysepala HOM05D000003 ORTHO05D000283 1.7e-11 73.6 160 30.0
PSO210G5446 Papaver somniferum HOM05D009705 ORTHO05D010020 1.7e-11 73.6 159 30.8
Aqoxy2G00457 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 2.2e-11 73.2 138 37.0
PGSC0003DMG400009332 Solanum tuberosum HOM05D000650 ORTHO05D010020 2.2e-11 73.2 165 33.9
TAR374G1307 Trochodendron aralioides HOM05D009061 ORTHO05D011147 2.9e-11 72.8 128 36.7
Solyc04g076610.3 Solanum lycopersicum HOM05D000650 ORTHO05D010020 3.8e-11 72.4 165 32.7
Aqoxy1G03382 Aquilegia oxysepala HOM05D000003 ORTHO05D000283 6.4e-11 71.6 158 32.9
Aqoxy2G02995 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 8.4e-11 71.2 169 29.6
TAR375G0002 Trochodendron aralioides HOM05D009061 ORTHO05D011147 1.1e-10 70.9 118 42.4
Aqoxy3G02768 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.4e-10 70.5 130 39.2
Aqoxy7G01645 Aquilegia oxysepala HOM05D000650 ORTHO05D010020 2.4e-10 69.7 148 33.8
PSO384G2824 Papaver somniferum HOM05D000003 ORTHO05D000004 3.2e-10 69.3 157 29.9
Sabra05G0119100 Salix brachista HOM05D000650 ORTHO05D010020 3.2e-10 69.3 133 32.3
Sopen00g012160 Solanum pennellii HOM05D000650 ORTHO05D010020 7.1e-10 68.2 151 32.5
TAR369G0834 Trochodendron aralioides HOM05D029991 ORTHO05D010020 7.1e-10 68.2 170 30.0
TAR622G1208 Trochodendron aralioides HOM05D009061 ORTHO05D011147 7.1e-10 68.2 89 46.1
Aqoxy7G02207 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 9.3e-10 67.8 152 31.6
Aqoxy2G01888 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 1.2e-09 67.4 132 31.1
CSS0038870 Camellia sinensis var. sinensis HOM05D000650 ORTHO05D010020 1.6e-09 67.0 140 36.4
TAR636G3519 Trochodendron aralioides HOM05D009061 ORTHO05D011147 1.6e-09 67.0 116 34.5
TAR628G0823 Trochodendron aralioides HOM05D009061 ORTHO05D011147 2.1e-09 66.6 128 39.8
TAR633G1846 Trochodendron aralioides HOM05D000113 ORTHO05D001798 2.1e-09 66.6 83 44.6
TAR195G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 3.5e-09 65.9 149 27.5
CSS0010523 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.6e-09 65.5 173 31.8
TAR591G0006 Trochodendron aralioides HOM05D009061 ORTHO05D011147 4.6e-09 65.5 90 38.9
Aqoxy5G02508 Aquilegia oxysepala HOM05D000903 ORTHO05D000731 7.9e-09 64.7 122 35.2
Thecc.04G000100 Theobroma cacao HOM05D000024 ORTHO05D000006 7.9e-09 64.7 136 36.0
PSO063G4564 Papaver somniferum HOM05D000003 ORTHO05D000283 1.0e-08 64.3 132 31.1
Aqoxy5G02742 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 1.3e-08 63.9 160 26.2
Aqoxy4G01321 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 1.8e-08 63.5 160 26.2
Actinidia24692 Actinidia chinensis HOM05D000155 ORTHO05D000022 2.3e-08 63.2 157 30.6
CSS0032736 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.0e-08 62.8 176 30.7
PSO832G3569 Papaver somniferum HOM05D000003 ORTHO05D000283 3.0e-08 62.8 157 32.5
RcHm_v2.0_Chr4g0422501 Rosa chinensis HOM05D000003 ORTHO05D000022 3.0e-08 62.8 167 32.3
CSS0044722 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.1e-08 62.0 173 31.8
CSS0029354 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.7e-08 61.6 164 29.9
Aqoxy2G01882 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 8.7e-08 61.2 118 37.3
TAR636G1554 Trochodendron aralioides HOM05D000095 ORTHO05D000393 8.7e-08 61.2 98 38.8
ATR0626G376 Amborella trichopoda HOM05D004588 ORTHO05D005365 1.1e-07 60.8 170 31.2
Aqoxy3G02414 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 1.1e-07 60.8 169 30.2
CSS0026614 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.1e-07 60.8 174 30.5
CSS0038037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.1e-07 60.8 172 32.0
CSS0041590 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.1e-07 60.8 176 30.7
RcHm_v2.0_Chr5g0021171 Rosa chinensis HOM05D003515 ORTHO05D004347 1.1e-07 60.8 147 33.3
TAR362G0488 Trochodendron aralioides HOM05D009061 ORTHO05D011147 1.1e-07 60.8 98 38.8
Aqoxy3G03001 Aquilegia oxysepala HOM05D000003 ORTHO05D000283 1.5e-07 60.5 128 31.2
CSS0023133 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.5e-07 60.5 176 30.7
Aqoxy1G01957 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 1.9e-07 60.1 126 30.2
CSS0032702 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.9e-07 60.1 138 36.2
Sopen09g012310 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-07 60.1 139 34.5
TAR627G0100 Trochodendron aralioides HOM05D000022 ORTHO05D000071 1.9e-07 60.1 79 39.2
Aqoxy1G02762 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 2.5e-07 59.7 89 34.8
QL02p097725 Quercus lobata HOM05D000003 ORTHO05D000004 2.5e-07 59.7 159 28.9
Atru.chr4.686 Acer truncatum HOM05D000003 ORTHO05D000126 4.3e-07 58.9 159 32.7
CSS0049818 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.3e-07 58.9 169 31.4
Aqoxy5G02091 Aquilegia oxysepala HOM05D005148 ORTHO05D006218 5.6e-07 58.5 64 43.8
TAR636G0547 Trochodendron aralioides HOM05D009061 ORTHO05D011147 7.4e-07 58.2 135 34.1
CSS0036731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.3e-06 57.4 143 32.9
Actinidia31778 Actinidia chinensis HOM05D000155 ORTHO05D000022 1.6e-06 57.0 157 29.3
Aqoxy4G00431 Aquilegia oxysepala HOM05D019711 ORTHO05D000022 1.6e-06 57.0 123 26.0
Hund07702 Selenicereus undatus HOM05D001688 ORTHO05D001571 1.6e-06 57.0 164 28.0
PGSC0003DMG400041332 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.6e-06 57.0 138 34.1
arahy.Tifrunner.gnm1.ann1.C14R7W Arachis hypogaea HOM05D000003 ORTHO05D000022 2.1e-06 56.6 136 29.4
SEGI_39148 Sequoiadendron giganteum HOM05D000352 ORTHO05D000260 2.1e-06 56.6 134 34.3
arahy.Tifrunner.gnm1.ann1.PA7RNP Arachis hypogaea HOM05D000003 ORTHO05D000022 2.8e-06 56.2 136 29.4
TAR383G0656 Trochodendron aralioides HOM05D009061 ORTHO05D011147 2.8e-06 56.2 85 42.4
TAR623G1545 Trochodendron aralioides HOM05D000001 ORTHO05D011287 2.8e-06 56.2 56 48.2
PSO111G0104 Papaver somniferum HOM05D000003 ORTHO05D000004 3.7e-06 55.8 157 28.0
TAR231G0003 Trochodendron aralioides HOM05D000650 ORTHO05D010020 3.7e-06 55.8 67 37.3
TAR362G0614 Trochodendron aralioides HOM05D000416 ORTHO05D000322 6.2e-06 55.1 72 37.5
CSS0007439 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.1e-06 54.7 175 33.1
RcHm_v2.0_Chr5g0038961 Rosa chinensis HOM05D008833 ORTHO05D000167 8.1e-06 54.7 136 32.4
TAR636G3045 Trochodendron aralioides HOM05D009061 ORTHO05D011147 8.1e-06 54.7 78 42.3


User provided reference genes

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