Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 3.6e-243 844.7 499 100.0
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 1.8e-154 550.1 366 72.1
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 1.4e-151 540.4 380 68.9
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 6.0e-150 535.0 377 67.6
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 7.9e-150 534.6 380 68.4
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 1.8e-149 533.5 379 67.8
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 1.5e-145 520.4 380 65.3
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 4.6e-142 508.8 378 64.6
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 1.0e-141 507.7 378 66.1
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 8.7e-141 504.6 380 63.4
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 3.3e-140 502.7 384 62.8
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 5.7e-140 501.9 378 65.3
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 8.2e-139 498.0 379 63.6
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.4e-138 496.5 384 60.7
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 6.9e-138 495.0 380 62.6
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 5.8e-137 491.9 379 62.3
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 5.8e-137 491.9 379 63.3
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 1.3e-136 490.7 377 62.6
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.9e-136 489.6 382 60.5
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 6.5e-136 488.4 378 61.9
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 6.5e-136 488.4 382 63.1
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 3.5e-134 482.6 434 56.9
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 3.0e-133 479.6 377 59.9
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 3.0e-133 479.6 378 61.6
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 5.1e-133 478.8 378 61.6
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 1.5e-129 467.2 394 61.4
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 5.0e-128 462.2 379 60.9
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 8.5e-128 461.5 381 59.6
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 3.2e-127 459.5 380 58.2
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 1.2e-126 457.6 379 57.8
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 1.6e-126 457.2 380 57.1
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 2.1e-126 456.8 380 57.9
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 7.9e-126 454.9 383 56.4
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 1.0e-125 454.5 377 59.9
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 8.8e-125 451.4 386 59.6
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 2.2e-123 446.8 389 58.4
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 2.8e-123 446.4 379 58.3
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 6.3e-123 445.3 381 58.8
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 4.1e-122 442.6 418 53.1
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 1.2e-121 441.0 377 56.8
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 2.0e-121 440.3 369 56.6
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 3.4e-121 439.5 313 67.4
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 1.7e-120 437.2 356 59.0
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 1.7e-120 437.2 378 55.8
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 2.9e-120 436.4 345 59.4
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 9.4e-119 431.4 358 58.7
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 1.6e-118 430.6 379 55.4
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 2.1e-118 430.3 311 64.6
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 1.0e-117 427.9 355 56.6
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 1.4e-117 427.6 356 57.3
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 1.4e-117 427.6 310 68.4
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 1.4e-117 427.6 354 58.5
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 1.8e-117 427.2 310 65.5
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 1.8e-117 427.2 357 58.5
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 3.0e-117 426.4 349 58.2
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 3.9e-117 426.0 471 47.1
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 5.1e-117 425.6 355 57.2
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 1.1e-116 424.5 354 57.9
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 1.5e-116 424.1 356 56.7
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 5.7e-116 422.2 376 56.9
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 9.7e-116 421.4 355 56.3
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 2.2e-115 420.2 399 52.9
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 2.2e-115 420.2 365 61.6
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 3.7e-115 419.5 354 57.3
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 4.8e-115 419.1 356 56.2
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 6.3e-115 418.7 379 54.1
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 4.1e-114 416.0 391 54.2
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 7.0e-114 415.2 355 56.3
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 2.0e-113 413.7 372 54.6
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 5.9e-113 412.1 368 57.1
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 1.0e-112 411.4 349 56.4
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 5.5e-111 405.6 355 55.2
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 2.1e-110 403.7 358 53.6
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 3.3e-108 396.4 378 52.1
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 3.3e-108 396.4 374 51.6
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 6.3e-107 392.1 384 51.6
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 1.4e-106 391.0 383 53.5
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 2.6e-105 386.7 372 52.7
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 2.6e-105 386.7 358 53.4
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 7.2e-103 378.6 378 50.0
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 9.4e-103 378.3 378 49.2
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 1.8e-101 374.0 359 51.3
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 2.3e-101 373.6 380 50.3
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 7.7e-97 358.6 381 49.1
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 1.8e-90 337.4 380 48.2
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 7.7e-89 332.0 258 63.6
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 1.5e-87 327.8 259 66.4
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.9e-83 313.5 366 51.4
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 6.4e-83 312.4 366 51.1
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.7e-78 296.2 367 49.0
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.2e-75 287.3 364 49.2
FAN06G2164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.7e-75 286.6 208 62.0
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 3.2e-74 283.5 364 42.0
Haze_03152 Corylus avellana HOM05D002214 ORTHO05D007367 5.4e-74 282.7 339 47.2
Haze_03149 Corylus avellana HOM05D002214 ORTHO05D007367 2.7e-73 280.4 339 46.9
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 7.3e-71 272.3 364 46.7
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 2.4e-66 257.3 379 38.3
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 4.6e-65 253.1 205 57.6
SalBow6G2835 Salvia bowleyana HOM05D002214 ORTHO05D007367 8.6e-64 248.8 228 54.8
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.1e-62 244.2 327 44.6
QL04p010120 Quercus lobata HOM05D002214 ORTHO05D007367 6.4e-59 232.6 206 60.7
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 1.1e-55 221.9 338 39.6
Aa31LG10G14890 Aethionema arabicum HOM05D002214 ORTHO05D007367 5.6e-55 219.5 232 47.4
Cpa.g.sc125.50 Carica papaya HOM05D002214 ORTHO05D007367 6.2e-54 216.1 197 55.3
Hma1.2p1_0685F.1_g203270 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 2.0e-52 211.1 147 67.3
RcHm_v2.0_Chr6g0283161 Rosa chinensis HOM05D002214 ORTHO05D007367 6.4e-51 206.1 240 50.4
Hund16633 Selenicereus undatus HOM05D002214 ORTHO05D007367 1.6e-49 201.4 149 62.4
CDE04G0429 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 2.1e-49 201.1 190 53.2
MD07G1016900 Malus domestica HOM05D002214 ORTHO05D007367 1.0e-48 198.7 223 49.3
AagrBONN_evm.TU.Sc2ySwM_344.2511 Anthoceros agrestis HOM05D002214 ORTHO05D007367 1.1e-47 195.3 354 32.2
Cpa.g.sc125.51 Carica papaya HOM05D002214 ORTHO05D007367 1.6e-46 191.4 192 51.6
Lj9A641T67 Lonicera japonica HOM05D002214 ORTHO05D007367 2.9e-43 180.6 306 36.6
FvH4_2g17910 Fragaria vesca HOM05D002214 ORTHO05D007367 1.9e-42 177.9 230 44.3
FAN24G3278 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.9e-42 177.9 230 44.3
FAN06G4994 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.3e-40 171.8 133 63.9
Pp3c8_19810 Physcomitrium patens HOM05D002214 ORTHO05D007367 9.0e-37 159.1 370 25.7
Thecc.01G405700 Theobroma cacao HOM05D002214 ORTHO05D007367 4.8e-30 136.7 109 59.6
Oeu016638.1 Olea europaea HOM05D002214 ORTHO05D007367 5.3e-29 133.3 103 61.2
Hund16632 Selenicereus undatus HOM05D002214 ORTHO05D007367 3.4e-28 130.6 120 51.7
Aa31LG10G14900 Aethionema arabicum HOM05D002214 ORTHO05D007367 1.3e-27 128.6 119 53.8
SEGI_30351 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 1.7e-27 128.3 140 42.9
SEGI_07097 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 4.2e-26 123.6 116 47.4
SMO137G0282 Selaginella moellendorffii HOM05D002214 ORTHO05D007367 1.6e-25 121.7 252 31.7
CBR_g46897 Chara braunii HOM05D002214 ORTHO05D007367 2.8e-22 110.9 168 35.7
Mapoly0009s0234 Marchantia polymorpha HOM05D002214 ORTHO05D007367 5.3e-21 106.7 226 29.2
Duzib133G0745 Durio zibethinus HOM05D002214 ORTHO05D007367 2.0e-20 104.8 67 67.2
Thecc.01G405800 Theobroma cacao HOM05D002214 ORTHO05D007367 5.0e-19 100.1 55 80.0
Hma1.2p1_0685F.1_g203250 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 4.5e-12 77.0 68 54.4
FAN27G0866 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.6e-09 67.4 62 53.2
FAN24G0587 Fragaria x ananassa HOM05D002214 ORTHO05D045595 4.6e-09 67.0 89 43.8
FAN24G2079 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.8e-06 57.0 46 56.5


User provided reference genes

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