Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0910 Trochodendron aralioides HOM05D003056 ORTHO05D003422 5.4e-46 187.6 115 100.0
TAR374G0913 Trochodendron aralioides HOM05D003056 ORTHO05D003422 5.3e-41 171.0 114 76.3
TAR381G1447 Trochodendron aralioides HOM05D003056 ORTHO05D003422 5.3e-41 171.0 114 77.2
TAR628G0528 Trochodendron aralioides HOM05D003056 ORTHO05D003422 3.4e-40 168.3 113 75.2
Nn5g30488 Nelumbo nucifera HOM05D003056 ORTHO05D003422 5.5e-30 134.4 112 58.0
CANSAT25G1867 Cannabis sativa HOM05D003056 ORTHO05D003422 7.1e-30 134.0 111 60.4
Hma1.2p1_1174F.1_g263900 Hydrangea macrophylla HOM05D003056 ORTHO05D003422 9.3e-30 133.7 106 62.3
PSO017G1313 Papaver somniferum HOM05D003056 ORTHO05D003422 2.7e-29 132.1 111 60.4
Aqoxy6G02787 Aquilegia oxysepala HOM05D003056 ORTHO05D003422 3.5e-29 131.7 109 57.8
Actinidia34380 Actinidia chinensis HOM05D003056 ORTHO05D003422 6.0e-29 131.0 112 57.1
PSO063G7185 Papaver somniferum HOM05D003056 ORTHO05D003422 7.9e-29 130.6 111 59.5
Atru.chr5.2421 Acer truncatum HOM05D003056 ORTHO05D003422 1.0e-28 130.2 110 57.3
Haze_10217 Corylus avellana HOM05D001121 ORTHO05D001256 1.0e-28 130.2 111 57.7
QL11p032336 Quercus lobata HOM05D003056 ORTHO05D003422 1.0e-28 130.2 112 56.2
CSS0042594 Camellia sinensis var. sinensis HOM05D003056 ORTHO05D003422 1.8e-28 129.4 104 59.6
Cfa004621 Carpinus fangiana HOM05D003056 ORTHO05D003422 1.8e-28 129.4 112 56.2
Ciclev10030402m.g Citrus clementina HOM05D003056 ORTHO05D003422 2.3e-28 129.0 107 59.8
Solyc01g107320.3 Solanum lycopersicum HOM05D003056 ORTHO05D003422 3.9e-28 128.3 112 58.0
PGSC0003DMG400025851 Solanum tuberosum HOM05D003056 ORTHO05D003422 8.7e-28 127.1 112 57.1
CiPaw.05G014700 Carya illinoinensis HOM05D003056 ORTHO05D003422 2.5e-27 125.6 112 53.6
FAN20G2458 Fragaria x ananassa HOM05D003056 ORTHO05D003422 3.3e-27 125.2 111 57.7
FvH4_2g04590 Fragaria vesca HOM05D003056 ORTHO05D003422 4.3e-27 124.8 111 55.0
FAN15G3015 Fragaria x ananassa HOM05D003056 ORTHO05D003422 4.3e-27 124.8 111 55.0
FAN24G1521 Fragaria x ananassa HOM05D003056 ORTHO05D003422 4.3e-27 124.8 111 55.0
Cc02_g19560 Coffea canephora HOM05D003056 ORTHO05D003422 5.7e-27 124.4 109 57.8
FAN27G0367 Fragaria x ananassa HOM05D003056 ORTHO05D003422 5.7e-27 124.4 111 70.3
Potri.001G297300 Populus trichocarpa HOM05D003056 ORTHO05D003422 5.7e-27 124.4 111 55.9
Ah.14g085500 Amaranthus hybridus HOM05D001121 ORTHO05D001256 7.4e-27 124.0 111 53.2
PGR142G1622 Punica granatum HOM05D003056 ORTHO05D003422 7.4e-27 124.0 112 53.6
MD10G1101600 Malus domestica HOM05D003056 ORTHO05D003422 1.3e-26 123.2 112 53.6
Oeu009681.2 Olea europaea HOM05D003056 ORTHO05D003422 1.3e-26 123.2 104 58.7
Potri.009G092100 Populus trichocarpa HOM05D003056 ORTHO05D003422 1.3e-26 123.2 111 55.9
RcHm_v2.0_Chr6g0254201 Rosa chinensis HOM05D003056 ORTHO05D003422 1.3e-26 123.2 111 55.0
SalBow2G2076 Salvia bowleyana HOM05D003056 ORTHO05D003422 2.8e-26 122.1 112 55.4
CAN.G606.38 Capsicum annuum HOM05D003056 ORTHO05D003422 3.7e-26 121.7 112 54.5
DCAR_029110 Daucus carota HOM05D003056 ORTHO05D003422 4.8e-26 121.3 112 56.2
Prupe.8G139200 Prunus persica HOM05D003056 ORTHO05D003422 4.8e-26 121.3 111 55.0
Sabra16G0186300 Salix brachista HOM05D003056 ORTHO05D003422 6.3e-26 120.9 111 54.1
Sed0000805 Sechium edule HOM05D003056 ORTHO05D003422 6.3e-26 120.9 112 54.5
Sopen01g049560 Solanum pennellii HOM05D003056 ORTHO05D003422 8.2e-26 120.6 112 55.4
EL10Ac8g19354 Beta vulgaris HOM05D001121 ORTHO05D003422 1.8e-25 119.4 110 51.8
Peaxi162Scf00016g02611 Petunia axillaris HOM05D003056 ORTHO05D003422 4.1e-25 118.2 109 55.0
MELO3C018506.2 Cucumis melo HOM05D003056 ORTHO05D003422 6.9e-25 117.5 112 53.6
CsaV3_7G007980 Cucumis sativus L. HOM05D003056 ORTHO05D003422 6.9e-25 117.5 112 54.5
COL.COLO4_32549 Corchorus olitorius HOM05D003056 ORTHO05D003422 9.0e-25 117.1 111 49.5
ClCG02G006650 Citrullus lanatus HOM05D003056 ORTHO05D003422 1.2e-24 116.7 112 53.6
SGA_v2.0_scaffold32G13017 Striga asiatica HOM05D003056 ORTHO05D003422 1.2e-24 116.7 105 54.3
Migut.B00415 Erythranthe guttata HOM05D003056 ORTHO05D003422 3.4e-24 115.2 104 54.8
Glyma.20G131400 Glycine max HOM05D003056 ORTHO05D003422 3.4e-24 115.2 111 52.3
Manes.10G074400 Manihot esculenta HOM05D003056 ORTHO05D003422 3.4e-24 115.2 112 50.9
Thecc.02G112900 Theobroma cacao HOM05D003056 ORTHO05D003422 1.0e-23 113.6 112 48.2
Lj5g0019062 Lotus japonicus HOM05D003056 ORTHO05D003422 1.3e-23 113.2 110 50.0
Duzib132G1008 Durio zibethinus HOM05D003056 ORTHO05D003422 5.0e-23 111.3 112 46.4
TWI14G1022 Tripterygium wilfordii HOM05D003056 ORTHO05D003422 8.4e-23 110.5 112 51.8
VMungo0720G1781 Vigna mungo HOM05D003056 ORTHO05D003422 1.1e-22 110.2 111 49.5
Phvul.007G042700 Phaseolus vulgaris HOM05D003056 ORTHO05D003422 5.5e-22 107.8 110 48.2
THA.LOC104819538 Tarenaya hassleriana HOM05D003056 ORTHO05D003422 5.5e-22 107.8 111 48.6
THA.LOC104807228 Tarenaya hassleriana HOM05D003056 ORTHO05D003422 7.2e-22 107.5 111 49.5
Gohir.A03G184400 Gossypium hirsutum HOM05D003056 ORTHO05D003422 9.3e-22 107.1 104 48.1
Gohir.D02G205900 Gossypium hirsutum HOM05D003056 ORTHO05D003422 9.3e-22 107.1 104 48.1
Gorai.005G233300 Gossypium raimondii HOM05D003056 ORTHO05D003422 9.3e-22 107.1 104 48.1
ECA234G1555 Erigeron canadensis HOM05D003056 ORTHO05D003422 1.2e-21 106.7 100 54.0
HanXRQChr10g0309411 Helianthus annuus HOM05D003056 ORTHO05D003422 7.9e-21 104.0 100 67.0
Eucgr.I01083 Eucalyptus grandis HOM05D003056 ORTHO05D003422 1.0e-20 103.6 99 49.5
Lalb_Chr21g0308181 Lupinus albus HOM05D003056 ORTHO05D003422 1.3e-20 103.2 102 52.0
Sc18g0003680 Simmondsia chinensis HOM05D003056 ORTHO05D003422 3.0e-20 102.1 111 66.7
RhsimUnG0126500 Rhododendron simsii HOM05D001121 ORTHO05D001256 8.7e-20 100.5 112 52.7
Aa31LG8G12930 Aethionema arabicum HOM05D003056 ORTHO05D003422 1.9e-19 99.4 107 45.8
Lj1g0002494 Lotus japonicus HOM05D003056 ORTHO05D003422 1.9e-19 99.4 102 46.1
CDE07G1890 Ceratophyllum demersum HOM05D001121 ORTHO05D003422 2.5e-19 99.0 112 45.5
ATR0618G281 Amborella trichopoda HOM05D003056 ORTHO05D003422 5.7e-19 97.8 103 46.6
Lsat_1_v5_gn_5_80001 Lactuca sativa HOM05D003056 ORTHO05D003422 9.7e-19 97.1 101 49.5
HPP92_020448 Vanilla planifolia HOM05D003056 ORTHO05D003422 2.4e-17 92.4 106 42.5
MSTRG.16696 Avicennia marina HOM05D003056 ORTHO05D003422 3.1e-17 92.0 113 58.4
Hma1.2p1_3153F.1_g333300 Hydrangea macrophylla HOM05D003056 ORTHO05D003422 9.0e-17 90.5 70 61.4
Rhsim11G0155300 Rhododendron simsii HOM05D001121 ORTHO05D001256 2.2e-15 85.9 112 56.2
SalBow6G6861 Salvia bowleyana HOM05D003056 ORTHO05D003422 7.2e-14 80.9 112 57.1
Lj5P217T31 Lonicera japonica HOM05D003056 ORTHO05D003422 1.0e-12 77.0 112 53.6
Medtr3g053350 Medicago truncatula HOM05D003056 ORTHO05D003422 1.1e-11 73.6 103 54.4
AUR62027360 Chenopodium quinoa HOM05D000284 ORTHO05D001229 1.5e-11 73.2 111 55.0
Carub.0003s3317 Capsella rubella HOM05D003056 ORTHO05D003422 9.7e-11 70.5 108 35.2
Ca_24349_v3 Cicer arietinum L. HOM05D003056 ORTHO05D003422 1.7e-10 69.7 108 51.9
SpUn0483_0010 Schrenkiella parvula HOM05D003056 ORTHO05D003422 1.7e-10 69.7 108 34.3
CARHR109480 Cardamine hirsuta HOM05D003056 ORTHO05D003422 2.2e-10 69.3 108 34.3
AagrBONN_evm.TU.Sc2ySwM_228.3517 Anthoceros agrestis HOM05D003056 ORTHO05D003422 3.7e-10 68.6 91 34.1
AL3G52990 Arabidopsis lyrata HOM05D003056 ORTHO05D003422 3.7e-10 68.6 108 35.2
Prupe.3G037500 Prunus persica HOM05D003056 ORTHO05D003422 3.7e-10 68.6 112 31.2
AUR62031282 Chenopodium quinoa HOM05D001121 ORTHO05D003422 4.8e-10 68.2 111 53.2
CiPaw.08G035000 Carya illinoinensis HOM05D003056 ORTHO05D003422 6.3e-10 67.8 110 32.7
Thhalv10022551m.g Eutrema salsugineum HOM05D003056 ORTHO05D003422 8.2e-10 67.4 107 33.6
Aqoxy7G02351 Aquilegia oxysepala HOM05D003056 ORTHO05D003422 1.1e-09 67.0 108 30.6
Gohir.A05G004100 Gossypium hirsutum HOM05D003056 ORTHO05D003422 1.1e-09 67.0 102 33.3
Gohir.D05G004500 Gossypium hirsutum HOM05D003056 ORTHO05D003422 1.1e-09 67.0 102 33.3
Gorai.009G004300 Gossypium raimondii HOM05D003056 ORTHO05D003422 1.1e-09 67.0 102 33.3
A06p33070 Brassica napus HOM05D003056 ORTHO05D003422 1.8e-09 66.2 108 31.5
BraA06t26237Z Brassica rapa HOM05D003056 ORTHO05D003422 1.8e-09 66.2 108 31.5
CSS0049173 Camellia sinensis var. sinensis HOM05D003056 ORTHO05D003422 1.8e-09 66.2 109 32.1
Ciclev10007460m.g Citrus clementina HOM05D003056 ORTHO05D003422 1.8e-09 66.2 98 34.7
Pp3c22_3230 Physcomitrium patens HOM05D003056 ORTHO05D003422 1.8e-09 66.2 88 34.1
Psat4g228080 Pisum sativum HOM05D003056 ORTHO05D003422 1.8e-09 66.2 111 50.5
TPR.G8314 Trifolium pratense HOM05D003056 ORTHO05D003422 1.8e-09 66.2 103 52.4
AT2G18940 Arabidopsis thaliana HOM05D003056 ORTHO05D003422 2.4e-09 65.9 108 33.3
Aa31LG8G16030 Aethionema arabicum HOM05D003056 ORTHO05D003422 3.1e-09 65.5 106 34.0
CANSAT11G0661 Cannabis sativa HOM05D003056 ORTHO05D003422 3.1e-09 65.5 102 31.4
QL02p098354 Quercus lobata HOM05D003056 ORTHO05D003422 3.1e-09 65.5 112 31.2
Atru.chr7.865 Acer truncatum HOM05D003056 ORTHO05D003422 4.1e-09 65.1 98 35.7
BcaNung06913 Brassica carinata HOM05D003056 ORTHO05D003422 5.3e-09 64.7 98 32.7
BolC3t18203H Brassica oleracea HOM05D003056 ORTHO05D003422 5.3e-09 64.7 98 32.7
Haze_21943 Corylus avellana HOM05D003056 ORTHO05D003422 5.3e-09 64.7 101 33.7
C03p59390 Brassica napus HOM05D003056 ORTHO05D003422 6.9e-09 64.3 108 30.6
FAN17G0903 Fragaria x ananassa HOM05D003056 ORTHO05D003422 6.9e-09 64.3 110 31.8
Dinv15783 Davidia involucrata HOM05D003056 ORTHO05D003422 9.1e-09 63.9 33 84.8
Cfa013401 Carpinus fangiana HOM05D003056 ORTHO05D003422 1.2e-08 63.5 109 31.2
CDE07G1469 Ceratophyllum demersum HOM05D003056 ORTHO05D003422 1.2e-08 63.5 111 30.6
Eucgr.C02384 Eucalyptus grandis HOM05D003056 ORTHO05D003422 1.2e-08 63.5 109 31.2
Glyma.11G001100 Glycine max HOM05D003056 ORTHO05D003422 1.2e-08 63.5 112 50.0
CsaV3_2G008490 Cucumis sativus L. HOM05D003056 ORTHO05D003422 1.5e-08 63.2 110 31.8
FAN07G1351 Fragaria x ananassa HOM05D003056 ORTHO05D003422 1.5e-08 63.2 110 30.9
PSO541G6324 Papaver somniferum HOM05D003056 ORTHO05D003422 1.5e-08 63.2 107 29.9
Sp3g28230 Schrenkiella parvula HOM05D003056 ORTHO05D003422 1.5e-08 63.2 105 52.4
SGA_v2.0_scaffold66G22432 Striga asiatica HOM05D003056 ORTHO05D003422 1.5e-08 63.2 99 31.3
GSVIVG01029248001 Vitis vinifera HOM05D003056 ORTHO05D003422 1.5e-08 63.2 98 32.7
Hma1.2p1_1303F.1_g274420 Hydrangea macrophylla HOM05D003056 ORTHO05D003422 2.0e-08 62.8 101 33.7
MD16G1255600 Malus domestica HOM05D003056 ORTHO05D003422 2.0e-08 62.8 112 28.6
PSO675G3831 Papaver somniferum HOM05D003056 ORTHO05D003422 2.0e-08 62.8 106 31.1
Potri.006G166200 Populus trichocarpa HOM05D003056 ORTHO05D003422 2.0e-08 62.8 102 33.3
VMungo0464G0716 Vigna mungo HOM05D003056 ORTHO05D003422 2.0e-08 62.8 108 29.6
RcHm_v2.0_Chr4g0401161 Rosa chinensis HOM05D003056 ORTHO05D003422 2.6e-08 62.4 112 30.4
THA.LOC104804489 Tarenaya hassleriana HOM05D003056 ORTHO05D003422 2.6e-08 62.4 98 33.7
Thecc.09G174700 Theobroma cacao HOM05D003056 ORTHO05D003422 2.6e-08 62.4 104 30.8
FvH4_4g07880 Fragaria vesca HOM05D003056 ORTHO05D003422 3.4e-08 62.0 110 30.0
Glyma.09G056200 Glycine max HOM05D003056 ORTHO05D003422 3.4e-08 62.0 108 29.6
Lalb_Chr15g0084001 Lupinus albus HOM05D003056 ORTHO05D003422 3.4e-08 62.0 98 31.6
Manes.06G022500 Manihot esculenta HOM05D003056 ORTHO05D003422 3.4e-08 62.0 97 33.0
Rhsim12G0158500 Rhododendron simsii HOM05D003056 ORTHO05D003422 3.4e-08 62.0 108 33.3
AL6G12130 Arabidopsis lyrata HOM05D003056 ORTHO05D003422 4.5e-08 61.6 103 50.5
Glyma.15G162500 Glycine max HOM05D003056 ORTHO05D003422 4.5e-08 61.6 108 29.6
Nn8g40410 Nelumbo nucifera HOM05D003056 ORTHO05D003422 4.5e-08 61.6 102 32.4
Lju50C4T14 Lonicera japonica HOM05D003056 ORTHO05D003422 5.9e-08 61.2 110 29.1
TWI63G0611 Tripterygium wilfordii HOM05D003056 ORTHO05D003422 5.9e-08 61.2 98 31.6
CDE06G2586 Ceratophyllum demersum HOM05D003056 ORTHO05D003422 7.7e-08 60.8 34 76.5
Duzib150G0731 Durio zibethinus HOM05D003056 ORTHO05D003422 7.7e-08 60.8 101 32.7
Carub.0006s0166 Capsella rubella HOM05D003056 ORTHO05D003422 1.0e-07 60.5 103 49.5
Migut.J01501 Erythranthe guttata HOM05D003056 ORTHO05D003422 1.0e-07 60.5 103 30.1
Lj6g0004675 Lotus japonicus HOM05D003056 ORTHO05D003422 1.0e-07 60.5 97 30.9
MD13G1249100 Malus domestica HOM05D003056 ORTHO05D003422 1.0e-07 60.5 111 27.0
Sabra06G0127800 Salix brachista HOM05D003056 ORTHO05D003422 1.0e-07 60.5 102 31.4
arahy.Tifrunner.gnm1.ann1.SCF8I0 Arachis hypogaea HOM05D001373 ORTHO05D003422 1.3e-07 60.1 55 54.5
EL10Ac8g18299 Beta vulgaris HOM05D003056 ORTHO05D003422 1.3e-07 60.1 97 33.0
Manes.14G156601 Manihot esculenta HOM05D003056 ORTHO05D003422 1.3e-07 60.1 97 32.0
AT5G02860 Arabidopsis thaliana HOM05D003056 ORTHO05D003422 1.7e-07 59.7 103 49.5
Cpa.g.sc95.42 Carica papaya HOM05D003056 ORTHO05D003422 1.7e-07 59.7 97 32.0
Rhsim12G0158600 Rhododendron simsii HOM05D003056 ORTHO05D003422 1.7e-07 59.7 108 33.3
VMungo1215G2431 Vigna mungo HOM05D003056 ORTHO05D003422 1.7e-07 59.7 112 49.1
Ah.09g230000 Amaranthus hybridus HOM05D003056 ORTHO05D003422 2.2e-07 59.3 98 30.6
BcaC06g36026 Brassica carinata HOM05D003056 ORTHO05D003422 2.2e-07 59.3 105 50.5
CARHR210470 Cardamine hirsuta HOM05D003056 ORTHO05D003422 2.2e-07 59.3 103 49.5
Cc06_g13040 Coffea canephora HOM05D003056 ORTHO05D003422 2.2e-07 59.3 108 29.6
arahy.Tifrunner.gnm1.ann1.45X8ED Arachis hypogaea HOM05D003056 ORTHO05D003422 3.8e-07 58.5 55 52.7
C07p08810 Brassica napus HOM05D003056 ORTHO05D003422 3.8e-07 58.5 105 49.5
BolC7t41294H Brassica oleracea HOM05D003056 ORTHO05D003422 3.8e-07 58.5 105 49.5
AUR62021315 Chenopodium quinoa HOM05D003056 ORTHO05D003422 3.8e-07 58.5 98 31.6
MELO3C004009.2 Cucumis melo HOM05D003056 ORTHO05D003422 3.8e-07 58.5 102 43.1
Sc05g0000680 Simmondsia chinensis HOM05D003056 ORTHO05D003422 3.8e-07 58.5 96 30.2
ATR0661G573 Amborella trichopoda HOM05D003056 ORTHO05D003422 5.0e-07 58.2 95 29.5
DCAR_020128 Daucus carota HOM05D003056 ORTHO05D003422 5.0e-07 58.2 95 31.6
Sed0009936 Sechium edule HOM05D003056 ORTHO05D003422 5.0e-07 58.2 97 30.9
A07p05480 Brassica napus HOM05D003056 ORTHO05D003422 6.5e-07 57.8 105 49.5
BraA07t28341Z Brassica rapa HOM05D003056 ORTHO05D003422 6.5e-07 57.8 105 49.5
FAN12G3026 Fragaria x ananassa HOM05D003056 ORTHO05D003422 6.5e-07 57.8 110 28.2
PGR044G1733 Punica granatum HOM05D003056 ORTHO05D003422 6.5e-07 57.8 102 28.4
COL.COLO4_29977 Corchorus olitorius HOM05D003056 ORTHO05D003422 8.5e-07 57.4 102 31.4
AUR62033232 Chenopodium quinoa HOM05D003056 ORTHO05D003422 1.1e-06 57.0 98 31.6
Psat1g146880 Pisum sativum HOM05D003056 ORTHO05D003422 1.1e-06 57.0 97 29.9
Duzib150G1593 Durio zibethinus HOM05D003056 ORTHO05D003422 1.4e-06 56.6 97 30.9
Nitab4.5_0000055g0170 Nicotiana tabacum HOM05D003056 ORTHO05D003422 1.4e-06 56.6 102 27.5
Ca_02033_v3 Cicer arietinum L. HOM05D003056 ORTHO05D003422 1.9e-06 56.2 96 30.2
ClCG11G012050 Citrullus lanatus HOM05D003056 ORTHO05D003422 1.9e-06 56.2 110 40.0
Thhalv10022557m.g Eutrema salsugineum HOM05D003056 ORTHO05D003422 1.9e-06 56.2 102 50.0
vmacro16033 Vaccinium macrocarpon HOM05D003056 ORTHO05D003422 2.5e-06 55.8 104 29.8
Phvul.002G053300 Phaseolus vulgaris HOM05D003056 ORTHO05D003422 3.2e-06 55.5 34 64.7
Phvul.009G239200 Phaseolus vulgaris HOM05D003056 ORTHO05D003422 3.2e-06 55.5 94 29.8
TPR.G20572 Trifolium pratense HOM05D003056 ORTHO05D003422 3.2e-06 55.5 97 29.9
Lsat_1_v5_gn_7_53500 Lactuca sativa HOM05D003056 ORTHO05D003422 5.5e-06 54.7 109 26.6
Peaxi162Scf01124g10012 Petunia axillaris HOM05D003056 ORTHO05D003422 5.5e-06 54.7 101 27.7


User provided reference genes

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