Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0758 Trochodendron aralioides HOM05D006647 ORTHO05D008232 2.7e-149 531.9 261 100.0
Nn2g15502 Nelumbo nucifera HOM05D006647 ORTHO05D008232 9.6e-115 417.2 263 78.3
Dinv09377 Davidia involucrata HOM05D006647 ORTHO05D008232 1.7e-111 406.4 264 78.4
GSVIVG01032057001 Vitis vinifera HOM05D006647 ORTHO05D008232 4.6e-109 398.3 261 74.7
Manes.07G004100 Manihot esculenta HOM05D006647 ORTHO05D008232 1.3e-106 390.2 264 73.1
Atru.chr11.2639 Acer truncatum HOM05D006647 ORTHO05D008232 1.7e-103 379.8 267 71.9
Cfa010738 Carpinus fangiana HOM05D006647 ORTHO05D008232 2.2e-103 379.4 266 74.1
Haze_03236 Corylus avellana HOM05D006647 ORTHO05D008232 1.9e-102 376.3 266 73.3
PSO339G5555 Papaver somniferum HOM05D006647 ORTHO05D008232 3.5e-101 372.1 260 70.0
TWI73G0313 Tripterygium wilfordii HOM05D006647 ORTHO05D008232 6.0e-101 371.3 266 71.4
Potri.009G064500 Populus trichocarpa HOM05D006647 ORTHO05D008232 2.5e-99 365.9 264 72.3
Hma1.2p1_0929F.1_g237940 Hydrangea macrophylla HOM05D006647 ORTHO05D008232 4.3e-99 365.2 212 81.1
CiPaw.13G002900 Carya illinoinensis HOM05D006647 ORTHO05D008232 5.6e-99 364.8 270 72.2
FAN03G0714 Fragaria x ananassa HOM05D006647 ORTHO05D008232 5.6e-99 364.8 265 71.3
FvH4_7g00690 Fragaria vesca HOM05D006647 ORTHO05D008232 4.8e-98 361.7 265 70.6
PSO384G2587 Papaver somniferum HOM05D006647 ORTHO05D008232 4.8e-98 361.7 260 69.6
Actinidia20680 Actinidia chinensis HOM05D006647 ORTHO05D008232 6.2e-98 361.3 260 72.7
Nitab4.5_0011905g0020 Nicotiana tabacum HOM05D006647 ORTHO05D008232 8.1e-98 360.9 262 69.5
THA.LOC104801981 Tarenaya hassleriana HOM05D006647 ORTHO05D008232 2.4e-97 359.4 258 70.9
Sabra09G0047700 Salix brachista HOM05D006647 ORTHO05D008232 3.1e-97 359.0 263 72.2
Nitab4.5_0001542g0050 Nicotiana tabacum HOM05D006647 ORTHO05D008232 1.2e-96 357.1 262 68.7
Thecc.01G413900 Theobroma cacao HOM05D006647 ORTHO05D008232 1.2e-96 357.1 267 66.7
Solyc01g086900.4 Solanum lycopersicum HOM05D006647 ORTHO05D008232 2.0e-96 356.3 262 68.3
Sopen01g033910 Solanum pennellii HOM05D006647 ORTHO05D008232 3.4e-96 355.5 262 68.3
CSS0029691 Camellia sinensis var. sinensis HOM05D006647 ORTHO05D008232 2.2e-95 352.8 272 68.8
Ciclev10032303m.g Citrus clementina HOM05D006647 ORTHO05D008232 4.9e-95 351.7 268 68.7
Prupe.2G009700 Prunus persica HOM05D006647 ORTHO05D008232 4.9e-95 351.7 274 68.2
Sc11g0009300 Simmondsia chinensis HOM05D006647 ORTHO05D008232 1.9e-94 349.7 258 69.8
Lj5g0023478 Lotus japonicus HOM05D006647 ORTHO05D008232 2.5e-94 349.4 265 67.5
QL04p005221 Quercus lobata HOM05D006647 ORTHO05D008232 4.2e-94 348.6 279 67.4
Lalb_Chr25g0283211 Lupinus albus HOM05D006647 ORTHO05D008232 9.3e-94 347.4 270 66.3
arahy.Tifrunner.gnm1.ann1.K7GJAS Arachis hypogaea HOM05D006647 ORTHO05D008232 2.1e-93 346.3 268 66.8
Lj9A629T102 Lonicera japonica HOM05D006647 ORTHO05D008232 2.1e-93 346.3 213 79.8
RcHm_v2.0_Chr1g0314911 Rosa chinensis HOM05D006647 ORTHO05D008232 2.7e-93 345.9 271 70.1
MSTRG.5006 Avicennia marina HOM05D006647 ORTHO05D008232 3.5e-93 345.5 269 69.5
arahy.Tifrunner.gnm1.ann1.BH4E67 Arachis hypogaea HOM05D006647 ORTHO05D008232 6.0e-93 344.7 264 67.0
CsaV3_7G031240 Cucumis sativus L. HOM05D006647 ORTHO05D008232 6.0e-93 344.7 267 68.2
HPP92_015763 Vanilla planifolia HOM05D006647 ORTHO05D008232 6.0e-93 344.7 261 67.8
Phvul.005G036700 Phaseolus vulgaris HOM05D006647 ORTHO05D008232 1.0e-92 344.0 265 67.2
Peaxi162Scf00428g00819 Petunia axillaris HOM05D006647 ORTHO05D008232 2.3e-92 342.8 262 67.2
DCAR_006301 Daucus carota HOM05D006647 ORTHO05D008232 1.5e-91 340.1 231 73.2
VMungo1080G0119 Vigna mungo HOM05D006647 ORTHO05D008232 1.9e-91 339.7 269 68.0
Duzib138G0958 Durio zibethinus HOM05D006647 ORTHO05D008232 2.5e-91 339.3 261 67.0
TPR.G12287 Trifolium pratense HOM05D006647 ORTHO05D008232 2.5e-91 339.3 267 66.3
MD07G1006600 Malus domestica HOM05D006647 ORTHO05D008232 4.3e-91 338.6 247 70.0
FAN06G3601 Fragaria x ananassa HOM05D006647 ORTHO05D008232 9.6e-91 337.4 207 78.3
FAN10G4164 Fragaria x ananassa HOM05D006647 ORTHO05D008232 9.6e-91 337.4 207 78.3
Sed0007518 Sechium edule HOM05D006647 ORTHO05D008232 1.6e-90 336.7 263 66.5
Psat5g204920 Pisum sativum HOM05D006647 ORTHO05D008232 6.3e-90 334.7 258 67.4
Medtr3g027870 Medicago truncatula HOM05D006647 ORTHO05D008232 1.8e-89 333.2 272 65.1
AL5G46420 Arabidopsis lyrata HOM05D006647 ORTHO05D008232 5.3e-89 331.6 245 65.7
HanXRQChr01g0017301 Helianthus annuus HOM05D006647 ORTHO05D008232 5.3e-89 331.6 263 68.1
CARHR291410 Cardamine hirsuta HOM05D006647 ORTHO05D008232 2.0e-88 329.7 263 63.9
Eucgr.G03394 Eucalyptus grandis HOM05D006647 ORTHO05D008232 2.0e-88 329.7 271 66.4
Glyma.08G152700 Glycine max HOM05D006647 ORTHO05D008232 2.6e-88 329.3 267 64.8
CANSAT01G0516 Cannabis sativa HOM05D006647 ORTHO05D008232 3.4e-88 328.9 230 70.9
Carub.0005s3017 Capsella rubella HOM05D006647 ORTHO05D008232 3.4e-88 328.9 248 63.7
COL.COLO4_23898 Corchorus olitorius HOM05D006647 ORTHO05D008232 1.0e-87 327.4 207 75.8
AT5G26880 Arabidopsis thaliana HOM05D006647 ORTHO05D008232 3.2e-86 322.4 262 61.8
Rhsim01G0130800 Rhododendron simsii HOM05D006647 ORTHO05D008232 7.2e-86 321.2 340 54.4
BcaC01g03971 Brassica carinata HOM05D006647 ORTHO05D008232 2.7e-85 319.3 254 65.0
Gohir.A08G145600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 2.7e-85 319.3 259 64.5
Gohir.D08G166600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 4.6e-85 318.5 256 64.8
Sp1g00030 Schrenkiella parvula HOM05D006647 ORTHO05D008232 4.6e-85 318.5 269 63.9
Sp5g00020 Schrenkiella parvula HOM05D006647 ORTHO05D008232 4.6e-85 318.5 269 63.9
MBI01_g36432_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 2.3e-84 316.2 259 64.5
Thhalv10006150m.g Eutrema salsugineum HOM05D006647 ORTHO05D008232 3.0e-84 315.8 224 67.4
BraA03t12997Z Brassica rapa HOM05D006647 ORTHO05D008232 3.9e-84 315.5 236 67.8
AUR62009372 Chenopodium quinoa HOM05D006647 ORTHO05D008232 3.9e-84 315.5 211 70.1
Gorai.004G174000 Gossypium raimondii HOM05D006647 ORTHO05D008232 5.1e-84 315.1 187 79.7
ATR0605G070 Amborella trichopoda HOM05D006647 ORTHO05D008232 1.9e-83 313.2 209 69.4
A03p38460 Brassica napus HOM05D006647 ORTHO05D008232 1.9e-83 313.2 242 65.7
BolC3t16926H Brassica oleracea HOM05D006647 ORTHO05D008232 2.5e-83 312.8 242 65.7
C03p46630 Brassica napus HOM05D006647 ORTHO05D008232 1.6e-82 310.1 244 64.3
Hund20080 Selenicereus undatus HOM05D006647 ORTHO05D008232 6.9e-81 304.7 218 71.6
ClCG09G004320 Citrullus lanatus HOM05D006647 ORTHO05D008232 2.0e-80 303.1 267 62.9
MSTRG.5008 Avicennia marina HOM05D006647 ORTHO05D008232 2.6e-80 302.8 242 65.7
Cc02_g28430 Coffea canephora HOM05D006647 ORTHO05D008232 4.5e-80 302.0 175 81.1
Migut.N01481 Erythranthe guttata HOM05D006647 ORTHO05D008232 4.5e-80 302.0 249 63.9
EL10Ac2g04310 Beta vulgaris HOM05D006647 ORTHO05D008232 7.7e-80 301.2 199 72.4
Migut.O00562 Erythranthe guttata HOM05D006647 ORTHO05D008232 4.2e-78 295.4 176 80.1
unitig_0.g1579 Utricularia gibba HOM05D006647 ORTHO05D008232 6.1e-77 291.6 212 68.4
SalBow4G2297 Salvia bowleyana HOM05D006647 ORTHO05D008232 3.0e-76 289.3 174 80.5
Lsat_1_v5_gn_1_109441 Lactuca sativa HOM05D006647 ORTHO05D008232 7.7e-72 274.6 210 67.1
MBI04_g14259_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 1.3e-71 273.9 262 58.4
CDE06G2349 Ceratophyllum demersum HOM05D006647 ORTHO05D008232 5.5e-70 268.5 169 74.0
SGA_v2.0_scaffold4G02252 Striga asiatica HOM05D006647 ORTHO05D008232 5.5e-70 268.5 270 59.3
Mapoly0078s0003 Marchantia polymorpha HOM05D006647 ORTHO05D008232 1.5e-67 260.4 223 57.4
Pp3c8_11960 Physcomitrium patens HOM05D006647 ORTHO05D008232 5.0e-63 245.4 210 56.7
AUR62023053 Chenopodium quinoa HOM05D006647 ORTHO05D008232 3.2e-62 242.7 221 56.6
A03p38500 Brassica napus HOM05D006647 ORTHO05D008232 9.4e-62 241.1 190 64.2
ECA248G3327 Erigeron canadensis HOM05D006647 ORTHO05D008232 8.0e-61 238.0 205 61.0
vmacro21178 Vaccinium macrocarpon HOM05D006647 ORTHO05D008232 8.0e-61 238.0 250 55.2
AagrBONN_evm.TU.Sc2ySwM_362.154 Anthoceros agrestis HOM05D006647 ORTHO05D008232 1.0e-60 237.7 184 62.0
CBR_g41537 Chara braunii HOM05D006647 ORTHO05D008232 2.8e-58 229.6 164 67.1
SMO351G0607 Selaginella moellendorffii HOM05D006647 ORTHO05D008232 2.8e-58 229.6 157 67.5
Pp3c23_8130 Physcomitrium patens HOM05D006647 ORTHO05D008232 3.1e-57 226.1 185 57.8
FAN01G0876 Fragaria x ananassa HOM05D006647 ORTHO05D008232 8.5e-55 218.0 172 67.4
FAN01G1843 Fragaria x ananassa HOM05D006647 ORTHO05D008232 2.0e-51 206.8 148 71.6
MELO3C023534.2 Cucumis melo HOM05D006647 ORTHO05D008232 2.6e-51 206.5 134 71.6
Os08g0506500 Oryza sativa ssp. japonica HOM05D006647 ORTHO05D008232 1.8e-49 200.3 185 59.5
Oeu010354.1 Olea europaea HOM05D006647 ORTHO05D008232 6.5e-47 191.8 110 82.7
QL04p005246 Quercus lobata HOM05D000030 ORTHO05D008232 1.9e-46 190.3 161 62.1
PGR031G3323 Punica granatum HOM05D006647 ORTHO05D008232 8.0e-45 184.9 127 73.2
PGSC0003DMG400006881 Solanum tuberosum HOM05D006647 ORTHO05D008232 1.0e-44 184.5 113 77.9
Cpa.g.sc234.12 Carica papaya HOM05D006647 ORTHO05D008232 1.7e-42 177.2 111 77.5
MCO06G107 Micromonas commoda HOM05D006647 ORTHO05D008232 3.1e-41 172.9 174 54.0
Cre10.g417650 Chlamydomonas reinhardtii HOM05D006647 ORTHO05D008232 1.7e-39 167.2 173 49.1
Zm00001eb034920 Zea mays HOM05D006647 ORTHO05D008232 6.6e-39 165.2 128 65.6
Cc00_g30670 Coffea canephora HOM05D006647 ORTHO05D008232 2.1e-37 160.2 82 89.0
Ca_26823_v3 Cicer arietinum L. HOM05D006647 ORTHO05D008232 1.4e-36 157.5 81 87.7
Aa31LG10G17440 Aethionema arabicum HOM05D006647 ORTHO05D008232 3.7e-34 149.4 106 68.9
BcaB01g01017 Brassica carinata HOM05D006647 ORTHO05D008232 3.7e-34 149.4 107 67.3
BcaB04g18808 Brassica carinata HOM05D006647 ORTHO05D008232 3.7e-34 149.4 107 67.3
Cpa.g.sc234.13 Carica papaya HOM05D006647 ORTHO05D008232 6.4e-34 148.7 134 61.9
Ah.10g029810 Amaranthus hybridus HOM05D006647 ORTHO05D008232 1.2e-32 144.4 93 71.0
FAN01G1906 Fragaria x ananassa HOM05D006647 ORTHO05D008232 7.8e-32 141.7 93 73.1
Aa31LG10G17450 Aethionema arabicum HOM05D006647 ORTHO05D008232 1.7e-26 124.0 156 46.2
MBI04_g09488_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 1.1e-25 121.3 90 70.0
PRCOL_00005260 Prasinoderma coloniale HOM05D006647 ORTHO05D008232 4.7e-21 105.9 178 39.3


User provided reference genes

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