Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0660 Trochodendron aralioides HOM05D000688 ORTHO05D017857 4.2e-33 144.1 70 100.0
Nn1g02628 Nelumbo nucifera HOM05D000688 ORTHO05D005697 5.7e-14 80.5 49 73.5
Glyma.13G192600 Glycine max HOM05D000688 ORTHO05D005697 1.2e-11 72.8 56 62.5
Glyma.17G183400 Glycine max HOM05D000688 ORTHO05D005697 3.5e-11 71.2 56 66.1
Sc10g0004560 Simmondsia chinensis HOM05D000688 ORTHO05D005697 3.5e-11 71.2 59 61.0
Rhsim07G0068800 Rhododendron simsii HOM05D000688 ORTHO05D005697 4.5e-11 70.9 54 55.6
ClCG08G010810 Citrullus lanatus HOM05D000688 ORTHO05D017857 1.3e-10 69.3 49 63.3
CsaV3_6G035730 Cucumis sativus L. HOM05D000688 ORTHO05D017857 1.3e-10 69.3 49 63.3
Hma1.2p1_1796F.1_g302740 Hydrangea macrophylla HOM05D000688 ORTHO05D005697 3.8e-10 67.8 57 59.6
CSS0026386 Camellia sinensis var. sinensis HOM05D000688 ORTHO05D005697 5.0e-10 67.4 57 54.4
Lalb_Chr03g0032181 Lupinus albus HOM05D000688 ORTHO05D017857 8.5e-10 66.6 50 58.0
Prupe.1G574600 Prunus persica HOM05D000688 ORTHO05D005697 8.5e-10 66.6 57 57.9
Dinv32011 Davidia involucrata HOM05D000688 ORTHO05D005697 1.1e-09 66.2 56 57.1
Lj3g0023740 Lotus japonicus HOM05D000688 ORTHO05D005697 1.1e-09 66.2 56 60.7
MD08G1237100 Malus domestica HOM05D000688 ORTHO05D005697 1.1e-09 66.2 53 58.5
Phvul.011G201300 Phaseolus vulgaris HOM05D000688 ORTHO05D005697 1.1e-09 66.2 56 60.7
MSTRG.23938 Avicennia marina HOM05D000688 ORTHO05D005697 1.5e-09 65.9 57 61.4
MELO3C011383.2 Cucumis melo HOM05D000688 ORTHO05D005697 1.9e-09 65.5 46 63.0
MBI06_g17216_MAGBIO Magnolia biondii HOM05D000688 ORTHO05D005697 1.9e-09 65.5 49 59.2
Os10g0495600 Oryza sativa ssp. japonica HOM05D000688 ORTHO05D005697 1.9e-09 65.5 54 53.7
Sopen01g033710 Solanum pennellii HOM05D000688 ORTHO05D005697 2.5e-09 65.1 66 50.0
CANSAT01G0672 Cannabis sativa HOM05D000688 ORTHO05D005697 3.2e-09 64.7 49 59.2
Haze_03000 Corylus avellana HOM05D000688 ORTHO05D005697 3.2e-09 64.7 59 54.2
Migut.B01339 Erythranthe guttata HOM05D000688 ORTHO05D005697 9.4e-09 63.2 46 60.9
Eucgr.G03213 Eucalyptus grandis HOM05D000688 ORTHO05D005697 9.4e-09 63.2 46 60.9
TWI15G1069 Tripterygium wilfordii HOM05D000688 ORTHO05D005697 9.4e-09 63.2 64 46.9
CSS0007151 Camellia sinensis var. sinensis HOM05D000688 ORTHO05D005697 1.2e-08 62.8 53 54.7
Cc11_g03150 Coffea canephora HOM05D000688 ORTHO05D005697 1.6e-08 62.4 63 46.0
HanXRQChr04g0119011 Helianthus annuus HOM05D000688 ORTHO05D005697 1.6e-08 62.4 57 56.1
PSO339G3101 Papaver somniferum HOM05D000688 ORTHO05D005697 2.1e-08 62.0 49 61.2
unitig_8.g3854 Utricularia gibba HOM05D000688 ORTHO05D017857 2.1e-08 62.0 48 60.4
Zm00001eb044710 Zea mays HOM05D000688 ORTHO05D005697 2.1e-08 62.0 49 51.0
Solyc01g086710.4 Solanum lycopersicum HOM05D000688 ORTHO05D005697 2.7e-08 61.6 63 49.2
FAN01G1757 Fragaria x ananassa HOM05D000688 ORTHO05D005697 4.7e-08 60.8 50 58.0
Manes.04G156600 Manihot esculenta HOM05D000688 ORTHO05D005697 6.1e-08 60.5 52 53.8
ECA236G4343 Erigeron canadensis HOM05D000688 ORTHO05D005697 8.0e-08 60.1 54 57.4
arahy.Tifrunner.gnm1.ann1.078WK3 Arachis hypogaea HOM05D000688 ORTHO05D005697 1.0e-07 59.7 43 67.4
Gohir.A10G189000 Gossypium hirsutum HOM05D000688 ORTHO05D005697 1.0e-07 59.7 64 45.3
Gohir.D10G196900 Gossypium hirsutum HOM05D000688 ORTHO05D005697 1.0e-07 59.7 64 45.3
Gorai.011G220100 Gossypium raimondii HOM05D000688 ORTHO05D005697 1.0e-07 59.7 64 45.3
SGA_v2.0_scaffold260G45868 Striga asiatica HOM05D000688 ORTHO05D005697 1.4e-07 59.3 54 51.9
Ca_00571_v3 Cicer arietinum L. HOM05D000688 ORTHO05D005697 3.0e-07 58.2 46 54.3
RcHm_v2.0_Chr1g0339591 Rosa chinensis HOM05D000688 ORTHO05D005697 3.0e-07 58.2 49 59.2
DCAR_019382 Daucus carota HOM05D000688 ORTHO05D005697 5.2e-07 57.4 53 49.1
Cfa010946 Carpinus fangiana HOM05D000688 ORTHO05D005697 6.7e-07 57.0 56 51.8
Hma1.2p1_1796F.1_g302750 Hydrangea macrophylla HOM05D000688 ORTHO05D017857 1.2e-06 56.2 46 60.9
Thecc.10G143000 Theobroma cacao HOM05D000688 ORTHO05D005697 1.2e-06 56.2 64 43.8
Peaxi162Scf00058g00317 Petunia axillaris HOM05D000688 ORTHO05D005697 1.5e-06 55.8 46 58.7
CiPaw.06G056500 Carya illinoinensis HOM05D000688 ORTHO05D005697 2.0e-06 55.5 56 53.6
FvH4_7g07420 Fragaria vesca HOM05D000688 ORTHO05D005697 2.0e-06 55.5 46 60.9
PGR031G2571 Punica granatum HOM05D000688 ORTHO05D005697 2.0e-06 55.5 46 54.3
arahy.Tifrunner.gnm1.ann1.91DTPA Arachis hypogaea HOM05D000688 ORTHO05D005697 2.6e-06 55.1 43 60.5
EL10Ac2g02765 Beta vulgaris HOM05D000688 ORTHO05D005697 2.6e-06 55.1 46 54.3
FvH4_5g25870 Fragaria vesca HOM05D000688 ORTHO05D005697 2.6e-06 55.1 64 46.9
Duzib106G0283 Durio zibethinus HOM05D000688 ORTHO05D005697 3.3e-06 54.7 64 42.2
FAN13G3127 Fragaria x ananassa HOM05D000688 ORTHO05D005697 4.4e-06 54.3 67 47.8
Potri.001G030750 Populus trichocarpa HOM05D000688 ORTHO05D005697 4.4e-06 54.3 45 53.3
Nitab4.5_0001542g0120 Nicotiana tabacum HOM05D000688 ORTHO05D005697 9.7e-06 53.1 36 63.9
QL04p021099 Quercus lobata HOM05D000688 ORTHO05D005697 9.7e-06 53.1 48 47.9


User provided reference genes

Program Settings