Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0596 Trochodendron aralioides HOM05D006951 ORTHO05D008594 1.0e-75 286.6 140 100.0
TAR369G1149 Trochodendron aralioides HOM05D006951 ORTHO05D008594 1.7e-62 242.7 131 87.8
CANSAT80G0954 Cannabis sativa HOM05D006951 ORTHO05D008594 1.8e-59 232.6 130 80.8
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 3.1e-59 231.9 130 79.2
CiPaw.09G171000 Carya illinoinensis HOM05D006951 ORTHO05D008594 5.2e-59 231.1 131 80.2
Actinidia26657 Actinidia chinensis HOM05D006951 ORTHO05D008594 6.8e-59 230.7 128 81.2
Actinidia28914 Actinidia chinensis HOM05D006951 ORTHO05D008594 1.2e-58 229.9 131 80.9
Thecc.05G069400 Theobroma cacao HOM05D006951 ORTHO05D008594 2.0e-58 229.2 131 80.2
Gohir.D09G141300 Gossypium hirsutum HOM05D006951 ORTHO05D008594 2.6e-58 228.8 131 80.2
Gorai.006G162200 Gossypium raimondii HOM05D006951 ORTHO05D008594 2.6e-58 228.8 131 80.2
Atru.chr8.1776 Acer truncatum HOM05D006951 ORTHO05D008594 3.4e-58 228.4 130 78.5
Haze_20517 Corylus avellana HOM05D006951 ORTHO05D008594 3.4e-58 228.4 130 77.7
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 3.4e-58 228.4 126 82.5
Duzib106G1710 Durio zibethinus HOM05D006951 ORTHO05D008594 3.4e-58 228.4 130 80.0
PSO339G4731 Papaver somniferum HOM05D006951 ORTHO05D008594 7.5e-58 227.3 131 80.2
vmacro07304 Vaccinium macrocarpon HOM05D006951 ORTHO05D008594 7.5e-58 227.3 131 78.6
Cpa.g.sc456.2 Carica papaya HOM05D006951 ORTHO05D008594 2.2e-57 225.7 132 78.8
Eucgr.A01658 Eucalyptus grandis HOM05D006951 ORTHO05D008594 2.9e-57 225.3 131 77.1
Glyma.19G185200 Glycine max HOM05D006951 ORTHO05D008594 2.9e-57 225.3 128 82.0
Gohir.A09G145200 Gossypium hirsutum HOM05D006951 ORTHO05D008594 2.9e-57 225.3 131 79.4
PSO801G0767 Papaver somniferum HOM05D006951 ORTHO05D008594 4.9e-57 224.6 131 79.4
Aqoxy2G01713 Aquilegia oxysepala HOM05D006951 ORTHO05D008594 6.4e-57 224.2 134 77.6
FAN05G0469 Fragaria x ananassa HOM05D006951 ORTHO05D008594 6.4e-57 224.2 130 79.2
Sabra06G0096900 Salix brachista HOM05D006951 ORTHO05D008594 6.4e-57 224.2 131 77.1
VMungo1383G2370 Vigna mungo HOM05D006951 ORTHO05D008594 6.4e-57 224.2 135 76.3
Cc06_g04390 Coffea canephora HOM05D006951 ORTHO05D008594 1.1e-56 223.4 128 78.1
FAN05G0824 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.4e-56 223.0 130 78.5
Prupe.7G127500 Prunus persica HOM05D006951 ORTHO05D008594 1.4e-56 223.0 128 75.8
FAN02G4365 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.9e-56 222.6 130 79.2
TWI74G0247 Tripterygium wilfordii HOM05D006951 ORTHO05D008594 1.9e-56 222.6 131 77.1
FAN14G1959 Fragaria x ananassa HOM05D006951 ORTHO05D008594 2.4e-56 222.2 130 78.5
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla HOM05D006951 ORTHO05D008594 2.4e-56 222.2 132 80.3
Solyc01g097140.4 Solanum lycopersicum HOM05D006951 ORTHO05D008594 2.4e-56 222.2 133 76.7
Nn6g35256 Nelumbo nucifera HOM05D006951 ORTHO05D008594 4.1e-56 221.5 133 76.7
MD12G1109000 Malus domestica HOM05D006951 ORTHO05D008594 5.4e-56 221.1 128 77.3
Medtr7g102310 Medicago truncatula HOM05D006951 ORTHO05D008594 1.6e-55 219.5 131 74.0
Nitab4.5_0002247g0030 Nicotiana tabacum HOM05D006951 ORTHO05D008594 1.6e-55 219.5 132 77.3
THA.LOC104816356 Tarenaya hassleriana HOM05D006951 ORTHO05D008594 1.6e-55 219.5 134 73.1
Potri.006G122700 Populus trichocarpa HOM05D006951 ORTHO05D008594 2.1e-55 219.2 130 75.4
FvH4_6g16580 Fragaria vesca HOM05D006951 ORTHO05D008594 2.7e-55 218.8 130 77.7
RcHm_v2.0_Chr3g0470511 Rosa chinensis HOM05D006951 ORTHO05D008594 2.7e-55 218.8 130 76.9
Phvul.001G180100 Phaseolus vulgaris HOM05D006951 ORTHO05D008594 3.5e-55 218.4 135 73.3
MSTRG.10329 Avicennia marina HOM05D006951 ORTHO05D008594 4.6e-55 218.0 132 75.8
Nitab4.5_0024714g0010 Nicotiana tabacum HOM05D006951 ORTHO05D008594 4.6e-55 218.0 132 76.5
COL.COLO4_26935 Corchorus olitorius HOM05D006951 ORTHO05D008594 6.0e-55 217.6 131 77.1
ECA233G5925 Erigeron canadensis HOM05D006951 ORTHO05D008594 7.8e-55 217.2 127 76.4
Sopen01g040820 Solanum pennellii HOM05D006951 ORTHO05D008594 7.8e-55 217.2 127 78.0
GSVIVG01033661001 Vitis vinifera HOM05D006951 ORTHO05D008594 7.8e-55 217.2 130 78.5
MBI07_g19430_MAGBIO Magnolia biondii HOM05D006951 ORTHO05D008594 1.0e-54 216.9 126 77.8
PGSC0003DMG400027515 Solanum tuberosum HOM05D006951 ORTHO05D008594 1.0e-54 216.9 127 78.0
Peaxi162Scf00282g00715 Petunia axillaris HOM05D006951 ORTHO05D008594 1.3e-54 216.5 128 75.8
SalBow5G4485 Salvia bowleyana HOM05D006951 ORTHO05D008594 1.7e-54 216.1 128 75.0
ClCG04G009460 Citrullus lanatus HOM05D006951 ORTHO05D008594 2.3e-54 215.7 126 74.6
Manes.16G055400 Manihot esculenta HOM05D006951 ORTHO05D008594 3.0e-54 215.3 128 75.0
CsaV3_6G040080 Cucumis sativus L. HOM05D006951 ORTHO05D008594 3.9e-54 214.9 126 75.4
Sed0009232 Sechium edule HOM05D006951 ORTHO05D008594 3.9e-54 214.9 127 76.4
EL10Ac7g16659 Beta vulgaris HOM05D006951 ORTHO05D008594 5.1e-54 214.5 128 76.6
AL6G12830 Arabidopsis lyrata HOM05D006951 ORTHO05D008594 8.6e-54 213.8 131 72.5
Carub.0006s0227 Capsella rubella HOM05D006951 ORTHO05D008594 1.1e-53 213.4 137 69.3
MELO3C024481.2 Cucumis melo HOM05D006951 ORTHO05D008594 1.1e-53 213.4 126 73.8
AUR62042061 Chenopodium quinoa HOM05D006951 ORTHO05D008594 1.9e-53 212.6 128 75.0
SalBow5G4376 Salvia bowleyana HOM05D006951 ORTHO05D008594 1.9e-53 212.6 128 74.2
AUR62026921 Chenopodium quinoa HOM05D006951 ORTHO05D008594 2.5e-53 212.2 128 75.0
Thhalv10014956m.g Eutrema salsugineum HOM05D006951 ORTHO05D008594 2.5e-53 212.2 136 67.6
Psat3g041600 Pisum sativum HOM05D006951 ORTHO05D008594 2.5e-53 212.2 126 76.2
Sp6g39280 Schrenkiella parvula HOM05D006951 ORTHO05D008594 3.3e-53 211.8 136 68.4
Lj1g0019165 Lotus japonicus HOM05D006951 ORTHO05D008594 4.3e-53 211.5 128 75.8
CAN.G134.74 Capsicum annuum HOM05D006951 ORTHO05D008594 7.3e-53 210.7 131 72.5
CARHR209870 Cardamine hirsuta HOM05D006951 ORTHO05D008594 1.2e-52 209.9 137 67.9
QL07p042869 Quercus lobata HOM05D006951 ORTHO05D008594 1.6e-52 209.5 166 60.8
DCAR_017669 Daucus carota HOM05D006951 ORTHO05D008594 2.1e-52 209.1 130 70.8
Aa31LG1G21700 Aethionema arabicum HOM05D006951 ORTHO05D008594 3.6e-52 208.4 128 71.1
Ca_08913_v3 Cicer arietinum L. HOM05D006951 ORTHO05D008594 4.7e-52 208.0 124 75.0
HanXRQChr02g0051701 Helianthus annuus HOM05D006951 ORTHO05D008594 4.7e-52 208.0 129 73.6
PGR004G1868 Punica granatum HOM05D006951 ORTHO05D008594 6.2e-52 207.6 127 74.8
Nitab4.5_0009274g0040 Nicotiana tabacum HOM05D006951 ORTHO05D008594 8.1e-52 207.2 127 76.4
Ciclev10013072m.g Citrus clementina HOM05D006951 ORTHO05D008594 1.1e-51 206.8 124 74.2
BcaB01g05838 Brassica carinata HOM05D006951 ORTHO05D008594 1.8e-51 206.1 134 65.7
C03p01520 Brassica napus HOM05D006951 ORTHO05D008594 1.8e-51 206.1 134 65.7
A03p01180 Brassica napus HOM05D006951 ORTHO05D008594 2.3e-51 205.7 132 66.7
BolC3t12706H Brassica oleracea HOM05D006951 ORTHO05D008594 2.3e-51 205.7 132 66.7
BraA03t09500Z Brassica rapa HOM05D006951 ORTHO05D008594 2.3e-51 205.7 132 66.7
Lalb_Chr25g0288931 Lupinus albus HOM05D006951 ORTHO05D008594 3.1e-51 205.3 126 71.4
SGA_v2.0_scaffold35G14116 Striga asiatica HOM05D006951 ORTHO05D008594 3.1e-51 205.3 128 71.1
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea HOM05D006951 ORTHO05D008594 1.2e-50 203.4 126 70.6
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea HOM05D006951 ORTHO05D008594 1.2e-50 203.4 126 70.6
BcaB01g05820 Brassica carinata HOM05D006951 ORTHO05D008594 1.2e-50 203.4 132 65.9
HanXRQChr13g0400861 Helianthus annuus HOM05D006951 ORTHO05D008594 1.5e-50 203.0 129 69.0
CDE08G0062 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 7.6e-50 200.7 126 69.0
Migut.L01713 Erythranthe guttata HOM05D006951 ORTHO05D008594 2.4e-48 195.7 130 68.5
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 2.4e-48 195.7 140 64.3
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 2.7e-47 192.2 123 72.4
ATR0723G063 Amborella trichopoda HOM05D006951 ORTHO05D008594 1.3e-46 189.9 125 66.4
CDE02G4226 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 1.3e-46 189.9 126 69.0
Os03g0108000 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 1.3e-46 189.9 127 65.4
Zm00001eb394010 Zea mays HOM05D006951 ORTHO05D008594 3.3e-45 185.3 128 63.3
Lsat_1_v5_gn_6_24461 Lactuca sativa HOM05D006951 ORTHO05D008594 4.3e-45 184.9 113 72.6
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 5.4e-40 167.9 116 61.2
SEGI_23238 Sequoiadendron giganteum HOM05D006951 ORTHO05D008594 1.7e-38 162.9 127 54.3
Dinv35800 Davidia involucrata HOM05D006951 ORTHO05D008594 6.6e-38 161.0 110 73.6
Pp3c1_27510 Physcomitrium patens HOM05D006951 ORTHO05D008594 6.2e-36 154.5 125 54.4
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.1e-35 153.7 166 51.2
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis HOM05D006951 ORTHO05D008594 1.6e-31 139.8 130 52.3
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis HOM05D006951 ORTHO05D008594 2.1e-31 139.4 130 53.1
Mapoly0029s0104 Marchantia polymorpha HOM05D006951 ORTHO05D008594 2.7e-31 139.0 114 53.5
CSS0013835 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 1.3e-28 130.2 80 78.8
TPR.G32820 Trifolium pratense HOM05D006951 ORTHO05D008594 2.8e-28 129.0 87 71.3
SMO118G0389 Selaginella moellendorffii HOM05D006951 ORTHO05D008594 8.1e-28 127.5 120 49.2
AT5G03455 Arabidopsis thaliana HOM05D006951 ORTHO05D008594 6.4e-25 117.9 81 67.9
CSS0008283 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 9.6e-21 104.0 57 71.9
TPR.G15158 Trifolium pratense HOM05D006951 ORTHO05D008594 1.2e-18 97.1 52 73.1
Atru.chr8.1773 Acer truncatum HOM05D006951 ORTHO05D008594 1.5e-18 96.7 57 66.7
Os10g0545700 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 2.0e-18 96.3 54 70.4
BcaC06g32064 Brassica carinata HOM05D006951 ORTHO05D008594 7.6e-18 94.4 57 66.7
PGR004G2181 Punica granatum HOM05D006951 ORTHO05D008594 1.4e-16 90.1 68 64.7
Hund14405 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.5e-08 62.8 43 58.1
Hund00749 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.2e-08 62.0 43 55.8
Haze_20905 Corylus avellana HOM05D006951 ORTHO05D008594 2.1e-07 59.7 39 71.8


User provided reference genes

Program Settings