Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3468 Trochodendron aralioides HOM05D002943 ORTHO05D002685 1.9e-33 145.2 71 100.0
Peaxi162Scf00641g00318 Petunia axillaris HOM05D002943 ORTHO05D002685 6.4e-13 77.0 52 76.9
SalBow4G2517 Salvia bowleyana HOM05D002943 ORTHO05D002685 7.1e-12 73.6 52 73.1
Cfa006157 Carpinus fangiana HOM05D002943 ORTHO05D002685 9.2e-12 73.2 52 71.2
Eucgr.K03366 Eucalyptus grandis HOM05D002943 ORTHO05D002685 1.2e-11 72.8 52 71.2
Hma1.2p1_0667F.1_g199660 Hydrangea macrophylla HOM05D002943 ORTHO05D002685 1.2e-11 72.8 52 71.2
Nn4g26296 Nelumbo nucifera HOM05D002943 ORTHO05D002685 1.2e-11 72.8 52 71.2
CANSAT56G2303 Cannabis sativa HOM05D002943 ORTHO05D002685 1.6e-11 72.4 54 68.5
Ca_09752_v3 Cicer arietinum L. HOM05D002943 ORTHO05D002685 1.6e-11 72.4 52 71.2
Duzib138G1878 Durio zibethinus HOM05D002943 ORTHO05D002685 1.6e-11 72.4 41 80.5
ClCG09G007120 Citrullus lanatus HOM05D002943 ORTHO05D002685 2.1e-11 72.0 52 71.2
Nitab4.5_0004318g0010 Nicotiana tabacum HOM05D002943 ORTHO05D002685 2.1e-11 72.0 52 69.2
Nitab4.5_0005971g0020 Nicotiana tabacum HOM05D002943 ORTHO05D002685 2.1e-11 72.0 52 69.2
Phvul.007G172600 Phaseolus vulgaris HOM05D002943 ORTHO05D002685 2.1e-11 72.0 52 73.1
VMungo0720G0375 Vigna mungo HOM05D002943 ORTHO05D002685 2.1e-11 72.0 52 73.1
Haze_04694 Corylus avellana HOM05D002943 ORTHO05D002685 2.7e-11 71.6 52 69.2
Lalb_Chr21g0306431 Lupinus albus HOM05D002943 ORTHO05D002685 2.7e-11 71.6 52 73.1
TPR.G9116 Trifolium pratense HOM05D002943 ORTHO05D002685 2.7e-11 71.6 52 69.2
CsaV3_7G028040 Cucumis sativus L. HOM05D002943 ORTHO05D002685 3.5e-11 71.2 41 80.5
Gohir.A08G045160 Gossypium hirsutum HOM05D002943 ORTHO05D002685 4.6e-11 70.9 52 71.2
Gohir.D08G055200 Gossypium hirsutum HOM05D002943 ORTHO05D002685 4.6e-11 70.9 52 71.2
Gorai.004G055700 Gossypium raimondii HOM05D002943 ORTHO05D002685 4.6e-11 70.9 52 71.2
Thecc.01G277000 Theobroma cacao HOM05D002943 ORTHO05D002685 4.6e-11 70.9 52 71.2
MBI04_g36449_MAGBIO Magnolia biondii HOM05D002943 ORTHO05D002685 6.0e-11 70.5 52 69.2
Psat6g060720 Pisum sativum HOM05D002943 ORTHO05D002685 6.0e-11 70.5 52 67.3
THA.LOC104815938 Tarenaya hassleriana HOM05D002943 ORTHO05D002685 6.0e-11 70.5 52 67.3
COL.COLO4_09075 Corchorus olitorius HOM05D002943 ORTHO05D002685 7.8e-11 70.1 41 80.5
Medtr1g072140 Medicago truncatula HOM05D002943 ORTHO05D002685 1.0e-10 69.7 52 69.2
TAR636G0178 Trochodendron aralioides HOM05D002943 ORTHO05D002685 1.0e-10 69.7 38 86.8
Cpa.g.sc52.53 Carica papaya HOM05D002943 ORTHO05D002685 1.3e-10 69.3 52 67.3
PSO210G2619 Papaver somniferum HOM05D002943 ORTHO05D002685 1.3e-10 69.3 41 78.0
PSO761G0421 Papaver somniferum HOM05D002943 ORTHO05D002685 1.3e-10 69.3 41 78.0
Sed0026548 Sechium edule HOM05D002943 ORTHO05D002685 1.3e-10 69.3 51 68.6
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 1.7e-10 68.9 41 75.6
Cc03_g10690 Coffea canephora HOM05D002943 ORTHO05D002685 1.7e-10 68.9 39 82.1
Prupe.8G239500 Prunus persica HOM05D002943 ORTHO05D002685 2.3e-10 68.6 52 65.4
Glyma.02G146800 Glycine max HOM05D002943 ORTHO05D002685 3.0e-10 68.2 52 69.2
arahy.Tifrunner.gnm1.ann1.NISQ8K Arachis hypogaea HOM05D002943 ORTHO05D002685 3.9e-10 67.8 41 73.2
RcHm_v2.0_Chr6g0290821 Rosa chinensis HOM05D002943 ORTHO05D002685 6.6e-10 67.0 52 67.3
QL12p021366 Quercus lobata HOM05D002943 ORTHO05D002685 1.1e-09 66.2 52 67.3
Atru.chr5.1459 Acer truncatum HOM05D002943 ORTHO05D002685 1.9e-09 65.5 52 65.4
Lj5g0020766 Lotus japonicus HOM05D002943 ORTHO05D002685 2.5e-09 65.1 52 61.5
PGR044G0058 Punica granatum HOM05D002943 ORTHO05D002685 3.3e-09 64.7 42 76.2
BcaB05g23663 Brassica carinata HOM05D002943 ORTHO05D002685 4.3e-09 64.3 41 78.0
MELO3C015824.2 Cucumis melo HOM05D002943 ORTHO05D002685 4.3e-09 64.3 48 68.8
GSVIVG01001162001 Vitis vinifera HOM05D002943 ORTHO05D002685 4.3e-09 64.3 52 63.5
AL6G50270 Arabidopsis lyrata HOM05D002943 ORTHO05D002685 7.3e-09 63.5 41 75.6
AT4G02730 Arabidopsis thaliana HOM05D002943 ORTHO05D002685 7.3e-09 63.5 41 75.6
CARHR251070 Cardamine hirsuta HOM05D002943 ORTHO05D002685 7.3e-09 63.5 41 75.6
Thhalv10028762m.g Eutrema salsugineum HOM05D002943 ORTHO05D002685 7.3e-09 63.5 41 75.6
Sp6g02690 Schrenkiella parvula HOM05D002943 ORTHO05D002685 7.3e-09 63.5 41 75.6
arahy.Tifrunner.gnm1.ann1.HA7VEA Arachis hypogaea HOM05D001631 ORTHO05D003183 9.5e-09 63.2 43 67.4
MD03G1263200 Malus domestica HOM05D002943 ORTHO05D002685 9.5e-09 63.2 52 63.5
Carub.0006s3437 Capsella rubella HOM05D002943 ORTHO05D002685 1.6e-08 62.4 41 73.2
AUR62000261 Chenopodium quinoa HOM05D002943 ORTHO05D002685 3.1e-07 58.2 41 63.4
Lsat_1_v5_gn_4_28161 Lactuca sativa HOM05D002943 ORTHO05D002685 7.6e-06 53.5 41 58.5
HPP92_017535 Vanilla planifolia HOM05D002943 ORTHO05D002685 7.6e-06 53.5 43 65.1
SEGI_09700 Sequoiadendron giganteum HOM05D002943 ORTHO05D002685 9.9e-06 53.1 33 66.7


User provided reference genes

Program Settings