Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3462 Trochodendron aralioides HOM05D005190 ORTHO05D006183 2.5e-74 282.0 138 100.0
CSS0027522 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 7.7e-63 243.8 138 82.6
CSS0047604 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 7.7e-63 243.8 138 82.6
Dinv09552 Davidia involucrata HOM05D005190 ORTHO05D006183 7.7e-63 243.8 139 86.3
Dinv10386 Davidia involucrata HOM05D005190 ORTHO05D006183 7.7e-63 243.8 139 86.3
GSVIVG01017663001 Vitis vinifera HOM05D005190 ORTHO05D006183 5.0e-62 241.1 138 85.5
GSVIVG01017602001 Vitis vinifera HOM05D005190 ORTHO05D006183 9.4e-61 236.9 138 84.1
CsaV3_4G025830 Cucumis sativus L. HOM05D005190 ORTHO05D006183 1.2e-60 236.5 138 83.3
Sed0026997 Sechium edule HOM05D005190 ORTHO05D006183 2.7e-60 235.3 138 81.9
Gohir.D06G202900 Gossypium hirsutum HOM05D005190 ORTHO05D006183 4.7e-60 234.6 138 80.4
Gorai.010G236800 Gossypium raimondii HOM05D005190 ORTHO05D006183 4.7e-60 234.6 138 80.4
CANSAT35G0272 Cannabis sativa HOM05D005190 ORTHO05D006183 6.1e-60 234.2 138 82.6
TAR636G2254 Trochodendron aralioides HOM05D005190 ORTHO05D006183 6.1e-60 234.2 138 87.0
Actinidia01056 Actinidia chinensis HOM05D005190 ORTHO05D006183 1.0e-59 233.4 138 80.4
MELO3C006747.2 Cucumis melo HOM05D005190 ORTHO05D006183 1.4e-59 233.0 138 82.6
Gohir.A06G195300 Gossypium hirsutum HOM05D005190 ORTHO05D006183 1.4e-59 233.0 138 79.7
Hma1.2p1_0013F.1_g007820 Hydrangea macrophylla HOM05D005190 ORTHO05D006183 1.4e-59 233.0 138 79.7
ClCG04G007440 Citrullus lanatus HOM05D005190 ORTHO05D006183 1.8e-59 232.6 138 81.9
Rhsim04G0247000 Rhododendron simsii HOM05D005190 ORTHO05D006183 2.3e-59 232.3 138 79.7
CsaV3_3G015480 Cucumis sativus L. HOM05D005190 ORTHO05D006183 6.7e-59 230.7 138 81.2
Potri.015G036700 Populus trichocarpa HOM05D005190 ORTHO05D006183 6.7e-59 230.7 138 82.6
ATR0730G183 Amborella trichopoda HOM05D005190 ORTHO05D006183 8.8e-59 230.3 138 81.9
Duzib235G0490 Durio zibethinus HOM05D005190 ORTHO05D006183 8.8e-59 230.3 138 81.2
FAN07G0799 Fragaria x ananassa HOM05D005190 ORTHO05D006183 1.1e-58 229.9 138 79.7
TPR.G12566 Trifolium pratense HOM05D005190 ORTHO05D006183 1.1e-58 229.9 139 78.4
TPR.G22255 Trifolium pratense HOM05D005190 ORTHO05D006183 1.1e-58 229.9 138 79.0
FAN17G1108 Fragaria x ananassa HOM05D000385 ORTHO05D006183 2.0e-58 229.2 136 80.1
MD13G1144000 Malus domestica HOM05D005190 ORTHO05D006183 2.0e-58 229.2 138 79.7
RcHm_v2.0_Chr4g0426821 Rosa chinensis HOM05D005190 ORTHO05D006183 2.6e-58 228.8 138 79.0
CiPaw.01G130900 Carya illinoinensis HOM05D005190 ORTHO05D006183 3.3e-58 228.4 136 82.4
Sabra15G0031200 Salix brachista HOM05D005190 ORTHO05D006183 3.3e-58 228.4 138 81.2
Thecc.06G136600 Theobroma cacao HOM05D005190 ORTHO05D006183 4.4e-58 228.0 138 79.7
Potri.012G045500 Populus trichocarpa HOM05D005190 ORTHO05D006183 7.4e-58 227.3 138 80.4
Prupe.8G102200 Prunus persica HOM05D005190 ORTHO05D006183 7.4e-58 227.3 138 79.0
Medtr7g096570 Medicago truncatula HOM05D005190 ORTHO05D006183 9.7e-58 226.9 139 77.0
FvH4_4g21210 Fragaria vesca HOM05D005190 ORTHO05D006183 1.3e-57 226.5 138 78.3
FAN12G1005 Fragaria x ananassa HOM05D005190 ORTHO05D006183 1.3e-57 226.5 138 78.3
arahy.Tifrunner.gnm1.ann1.JER3JH Arachis hypogaea HOM05D005190 ORTHO05D006183 1.7e-57 226.1 138 76.1
Sabra12G0031600 Salix brachista HOM05D005190 ORTHO05D006183 1.7e-57 226.1 138 80.4
Lj4g0016109 Lotus japonicus HOM05D005190 ORTHO05D006183 3.7e-57 224.9 139 77.0
Cfa006455 Carpinus fangiana HOM05D005190 ORTHO05D006183 6.3e-57 224.2 136 78.7
Manes.17G016100 Manihot esculenta HOM05D005190 ORTHO05D006183 6.3e-57 224.2 138 79.7
DCAR_006510 Daucus carota HOM05D005190 ORTHO05D006183 1.1e-56 223.4 138 75.4
arahy.Tifrunner.gnm1.ann1.CG6LTA Arachis hypogaea HOM05D005190 ORTHO05D006183 1.4e-56 223.0 138 74.6
MBI19_g06603_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 1.8e-56 222.6 138 77.5
Oeu009981.1 Olea europaea HOM05D005190 ORTHO05D006183 1.8e-56 222.6 138 77.5
PGR044G0309 Punica granatum HOM05D005190 ORTHO05D006183 1.8e-56 222.6 138 76.1
Duzib192G0082 Durio zibethinus HOM05D005190 ORTHO05D006183 2.4e-56 222.2 138 79.0
Nn3g18945 Nelumbo nucifera HOM05D005190 ORTHO05D006183 2.4e-56 222.2 138 78.3
arahy.Tifrunner.gnm1.ann1.W6NXGM Arachis hypogaea HOM05D005190 ORTHO05D006183 5.3e-56 221.1 131 78.6
Lalb_Chr07g0181821 Lupinus albus HOM05D005190 ORTHO05D006183 5.3e-56 221.1 138 74.6
Lalb_Chr13g0298851 Lupinus albus HOM05D005190 ORTHO05D006183 5.3e-56 221.1 138 72.5
Phvul.004G071200 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 5.3e-56 221.1 136 80.1
Psat0ss1196g0480 Pisum sativum HOM05D005190 ORTHO05D006183 5.3e-56 221.1 134 78.4
QL06p013825 Quercus lobata HOM05D005190 ORTHO05D006183 5.3e-56 221.1 137 78.8
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 7.0e-56 220.7 136 78.7
arahy.Tifrunner.gnm1.ann1.R3ADAS Arachis hypogaea HOM05D005190 ORTHO05D006183 9.1e-56 220.3 131 77.9
TWI38G0007 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 9.1e-56 220.3 138 76.1
Phvul.004G071300 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 1.2e-55 219.9 136 79.4
Glyma.02G064900 Glycine max HOM05D005190 ORTHO05D006183 1.5e-55 219.5 140 78.6
Ciclev10006189m.g Citrus clementina HOM05D005190 ORTHO05D006183 2.6e-55 218.8 138 76.1
MSTRG.12184 Avicennia marina HOM05D005190 ORTHO05D006183 3.5e-55 218.4 138 77.5
Ca_02362_v3 Cicer arietinum L. HOM05D005190 ORTHO05D006183 7.7e-55 217.2 139 75.5
Sc06g0001490 Simmondsia chinensis HOM05D005190 ORTHO05D006183 7.7e-55 217.2 138 77.5
HanXRQChr06g0166421 Helianthus annuus HOM05D005190 ORTHO05D006183 1.0e-54 216.9 138 72.5
Glyma.16G146000 Glycine max HOM05D005190 ORTHO05D006183 1.3e-54 216.5 135 77.0
COL.COLO4_30940 Corchorus olitorius HOM05D005190 ORTHO05D006183 2.9e-54 215.3 147 74.1
Peaxi162Scf00074g00538 Petunia axillaris HOM05D005190 ORTHO05D006183 8.5e-54 213.8 138 75.4
Lsat_1_v5_gn_3_12780 Lactuca sativa HOM05D005190 ORTHO05D006183 1.1e-53 213.4 138 73.9
TWI63G0483 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 1.1e-53 213.4 138 73.2
HPP92_019515 Vanilla planifolia HOM05D005190 ORTHO05D006183 1.9e-53 212.6 132 76.5
Cc07_g19070 Coffea canephora HOM05D005190 ORTHO05D006183 2.5e-53 212.2 138 73.9
Cpa.g.sc146.40 Carica papaya HOM05D005190 ORTHO05D006183 3.2e-53 211.8 132 77.3
HanXRQChr17g0534691 Helianthus annuus HOM05D005190 ORTHO05D006183 3.2e-53 211.8 138 71.7
EL10Ac3g06230 Beta vulgaris HOM05D005190 ORTHO05D006183 5.5e-53 211.1 138 72.5
Migut.N00575 Erythranthe guttata HOM05D005190 ORTHO05D006183 3.6e-52 208.4 143 70.6
AUR62002533 Chenopodium quinoa HOM05D005190 ORTHO05D006183 4.7e-52 208.0 138 72.5
ECA246G1588 Erigeron canadensis HOM05D005190 ORTHO05D006183 8.0e-52 207.2 140 71.4
SalBow4G3050 Salvia bowleyana HOM05D005190 ORTHO05D006183 8.0e-52 207.2 138 70.3
SEGI_18361 Sequoiadendron giganteum HOM05D005190 ORTHO05D006183 1.0e-51 206.8 139 73.4
THA.LOC104800562 Tarenaya hassleriana HOM05D005190 ORTHO05D006183 1.4e-51 206.5 138 71.7
SGA_v2.0_scaffold36G14289 Striga asiatica HOM05D005190 ORTHO05D006183 1.8e-51 206.1 138 71.0
PGSC0003DMG400012133 Solanum tuberosum HOM05D005190 ORTHO05D006183 2.3e-51 205.7 138 71.7
Nitab4.5_0002793g0070 Nicotiana tabacum HOM05D005190 ORTHO05D006183 6.7e-51 204.1 138 71.7
Solyc08g082740.4 Solanum lycopersicum HOM05D005190 ORTHO05D006183 8.8e-51 203.8 138 71.7
Sopen08g030970 Solanum pennellii HOM05D005190 ORTHO05D006183 8.8e-51 203.8 138 71.7
AUR62023660 Chenopodium quinoa HOM05D005190 ORTHO05D006183 1.5e-50 203.0 138 70.3
Nitab4.5_0002367g0140 Nicotiana tabacum HOM05D005190 ORTHO05D006183 1.5e-50 203.0 138 71.7
SGA_v2.0_scaffold198G41066 Striga asiatica HOM05D005190 ORTHO05D006183 4.4e-50 201.4 138 71.0
BcaC05g27594 Brassica carinata HOM05D005190 ORTHO05D006183 2.8e-49 198.7 146 66.4
A05p21200 Brassica napus HOM05D005190 ORTHO05D006183 2.8e-49 198.7 146 66.4
C05p35790 Brassica napus HOM05D005190 ORTHO05D006183 2.8e-49 198.7 146 66.4
BraA05t21026Z Brassica rapa HOM05D005190 ORTHO05D006183 2.8e-49 198.7 146 66.4
CAN.G567.34 Capsicum annuum HOM05D005190 ORTHO05D006183 8.2e-49 197.2 138 70.3
Lsat_1_v5_gn_6_83381 Lactuca sativa HOM05D005190 ORTHO05D006183 2.4e-48 195.7 134 68.7
Pp3c3_17800 Physcomitrium patens HOM05D005190 ORTHO05D006183 5.3e-48 194.5 143 72.0
PSO782G1806 Papaver somniferum HOM05D005190 ORTHO05D006183 2.2e-46 189.1 120 70.8
Aa31LG10G5580 Aethionema arabicum HOM05D005190 ORTHO05D006183 3.8e-46 188.3 114 73.7
TPR.G39662 Trifolium pratense HOM05D005190 ORTHO05D006183 3.8e-46 188.3 120 79.2
BcaB04g17462 Brassica carinata HOM05D005190 ORTHO05D006183 6.5e-46 187.6 115 73.9
PSO478G2609 Papaver somniferum HOM05D005190 ORTHO05D006183 8.5e-46 187.2 118 71.2
Thhalv10011800m.g Eutrema salsugineum HOM05D005190 ORTHO05D006183 1.1e-45 186.8 114 74.6
AT1G48160 Arabidopsis thaliana HOM05D005190 ORTHO05D006183 1.9e-45 186.0 115 73.0
AL8G32340 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 3.2e-45 185.3 115 72.2
Carub.0001s3725 Capsella rubella HOM05D005190 ORTHO05D006183 3.2e-45 185.3 114 73.7
Os06g0342100 Oryza sativa ssp. japonica HOM05D005190 ORTHO05D006183 3.2e-45 185.3 132 66.7
Sp1g35120 Schrenkiella parvula HOM05D005190 ORTHO05D006183 3.2e-45 185.3 115 73.0
AL1G54730 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 5.5e-45 184.5 114 71.9
BcaC07g37169 Brassica carinata HOM05D005190 ORTHO05D006183 4.7e-44 181.4 108 75.0
C08p05420 Brassica napus HOM05D005190 ORTHO05D006183 4.7e-44 181.4 108 75.0
BolC8t47359H Brassica oleracea HOM05D005190 ORTHO05D006183 4.7e-44 181.4 108 75.0
MD13G1143900 Malus domestica HOM05D005190 ORTHO05D006183 6.1e-44 181.0 114 77.2
Zm00001eb066670 Zea mays HOM05D005190 ORTHO05D006183 1.0e-43 180.3 131 65.6
Zm00001eb081370 Zea mays HOM05D005190 ORTHO05D006183 1.0e-43 180.3 131 65.6
A08p05180 Brassica napus HOM05D005190 ORTHO05D006183 1.4e-43 179.9 108 74.1
BraA08t32536Z Brassica rapa HOM05D005190 ORTHO05D006183 1.4e-43 179.9 108 74.1
BolC5t32295H Brassica oleracea HOM05D005190 ORTHO05D006183 3.0e-43 178.7 129 65.9
Mapoly0004s0269 Marchantia polymorpha HOM05D005190 ORTHO05D006183 4.0e-43 178.3 139 66.2
CARHR037790 Cardamine hirsuta HOM05D005190 ORTHO05D006183 5.2e-43 177.9 108 75.0
TPR.G16114 Trifolium pratense HOM05D005190 ORTHO05D006183 1.7e-38 162.9 98 73.5
Ah.07g203500 Amaranthus hybridus HOM05D005190 ORTHO05D006183 2.5e-37 159.1 93 74.2
unitig_747.g21355 Utricularia gibba HOM05D001490 ORTHO05D001450 1.2e-36 156.8 138 60.9
AagrBONN_evm.TU.Sc2ySwM_362.2360 Anthoceros agrestis HOM05D005190 ORTHO05D006183 4.0e-35 151.8 135 53.3
arahy.Tifrunner.gnm1.ann1.AFL9DX Arachis hypogaea HOM05D005190 ORTHO05D006183 2.6e-34 149.1 118 63.6
BcaC08g43007 Brassica carinata HOM05D005190 ORTHO05D006183 2.4e-32 142.5 86 72.1
CBR_g39024 Chara braunii HOM05D005190 ORTHO05D006183 2.9e-30 135.6 132 54.5
SMO352G0034 Selaginella moellendorffii HOM05D005190 ORTHO05D006183 1.1e-29 133.7 125 55.2
C06p02560 Brassica napus HOM05D005190 ORTHO05D006183 4.7e-28 128.3 112 55.4
MBI07_g26367_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 6.1e-28 127.9 122 50.8
vmacro08000 Vaccinium macrocarpon HOM05D005190 ORTHO05D006183 6.8e-27 124.4 81 77.8
Dinv29526 Davidia involucrata HOM05D005190 ORTHO05D006183 5.7e-26 121.3 76 81.6
BcaC01g01495 Brassica carinata HOM05D005190 ORTHO05D006183 1.3e-25 120.2 135 50.4
Eucgr.G02037 Eucalyptus grandis HOM05D005190 ORTHO05D006183 1.3e-25 120.2 72 69.4
ClCG05G006830 Citrullus lanatus HOM05D005190 ORTHO05D006183 1.7e-25 119.8 59 84.7
Aqoxy2G01813 Aquilegia oxysepala HOM05D005190 ORTHO05D006183 1.7e-22 109.8 76 77.6
CDE05G0439 Ceratophyllum demersum HOM05D005190 ORTHO05D006183 4.3e-21 105.1 84 60.7
MCO01G268 Micromonas commoda HOM05D005190 ORTHO05D006183 4.3e-21 105.1 102 49.0
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 4.7e-20 101.7 53 84.9
BolC6t35384H Brassica oleracea HOM05D005190 ORTHO05D006183 2.3e-19 99.4 59 69.5
Haze_12814 Corylus avellana HOM05D000165 ORTHO05D001328 8.9e-19 97.4 70 64.3
Cre02.g095070 Chlamydomonas reinhardtii HOM05D005190 ORTHO05D006183 2.6e-18 95.9 149 37.6
Atru.chr4.92 Acer truncatum HOM05D005190 ORTHO05D006183 4.9e-17 91.7 79 62.0
EL10As1g23068 Beta vulgaris HOM05D005190 ORTHO05D006183 2.0e-15 86.3 80 56.2
RcHm_v2.0_Chr7g0219311 Rosa chinensis HOM05D005190 ORTHO05D006183 2.0e-15 86.3 59 64.4
Cfa023211 Carpinus fangiana HOM05D005190 ORTHO05D006183 1.2e-12 77.0 105 38.1
PRCOL_00001126 Prasinoderma coloniale HOM05D005190 ORTHO05D006183 4.7e-12 75.1 143 38.5
MD13G1001700 Malus domestica HOM05D005190 ORTHO05D006183 3.4e-10 68.9 81 46.9
MELO3C033488.2 Cucumis melo HOM05D005190 ORTHO05D006183 4.4e-10 68.6 78 52.6
CSS0036753 Camellia sinensis var. sinensis HOM05D008986 ORTHO05D113366 1.0e-06 57.4 62 56.5


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