Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3247 Trochodendron aralioides HOM05D004870 ORTHO05D006061 1.7e-260 902.1 456 100.0
MBI03_g13828_MAGBIO Magnolia biondii HOM05D004870 ORTHO05D006061 5.4e-230 800.8 456 86.8
CiPaw.05G171200 Carya illinoinensis HOM05D004870 ORTHO05D006061 3.5e-229 798.1 456 87.1
Dinv25387 Davidia involucrata HOM05D004870 ORTHO05D006061 3.3e-227 791.6 462 87.7
Dinv17644 Davidia involucrata HOM05D004870 ORTHO05D006061 1.6e-226 789.3 461 87.4
Sc06g0006850 Simmondsia chinensis HOM05D004870 ORTHO05D006061 4.7e-226 787.7 453 87.4
Prupe.4G061300 Prunus persica HOM05D004870 ORTHO05D006061 8.0e-226 786.9 455 84.8
CSS0023232 Camellia sinensis var. sinensis HOM05D004870 ORTHO05D006061 4.0e-225 784.6 464 85.3
Actinidia04336 Actinidia chinensis HOM05D004870 ORTHO05D006061 5.2e-225 784.3 462 85.7
Thecc.02G155600 Theobroma cacao HOM05D004870 ORTHO05D006061 5.2e-225 784.3 456 86.2
Potri.005G089700 Populus trichocarpa HOM05D004870 ORTHO05D006061 2.0e-224 782.3 458 86.5
TWI53G0925 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 7.5e-224 780.4 456 85.5
Glyma.10G286200 Glycine max HOM05D004870 ORTHO05D006061 9.8e-224 780.0 456 86.0
Gohir.D02G189300 Gossypium hirsutum HOM05D004870 ORTHO05D006061 1.3e-223 779.6 457 85.3
Gorai.005G212000 Gossypium raimondii HOM05D004870 ORTHO05D006061 1.3e-223 779.6 457 85.3
Haze_11781 Corylus avellana HOM05D004870 ORTHO05D006061 1.7e-223 779.2 464 85.6
Gohir.A03G166000 Gossypium hirsutum HOM05D004870 ORTHO05D006061 1.7e-223 779.2 457 85.3
PSO063G7087 Papaver somniferum HOM05D004870 ORTHO05D006061 8.3e-223 776.9 463 83.2
Manes.15G107800 Manihot esculenta HOM05D004870 ORTHO05D006061 1.1e-222 776.5 456 85.7
Glyma.20G103100 Glycine max HOM05D004870 ORTHO05D006061 1.4e-222 776.2 456 85.5
QL03p045749 Quercus lobata HOM05D004870 ORTHO05D006061 1.4e-222 776.2 451 86.7
Duzib132G1043 Durio zibethinus HOM05D004870 ORTHO05D006061 1.9e-222 775.8 456 84.9
PSO782G4799 Papaver somniferum HOM05D004870 ORTHO05D006061 1.2e-221 773.1 464 82.5
TWI74G1525 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 1.2e-221 773.1 456 84.0
Ciclev10031476m.g Citrus clementina HOM05D004870 ORTHO05D006061 1.6e-221 772.7 460 85.7
MD05G1301200 Malus domestica HOM05D004870 ORTHO05D006061 2.0e-221 772.3 456 84.9
Eucgr.I02621 Eucalyptus grandis HOM05D004870 ORTHO05D006061 2.7e-221 771.9 456 84.0
CAN.G282.44 Capsicum annuum HOM05D004870 ORTHO05D006061 3.5e-221 771.5 459 85.0
VMungo0720G1992 Vigna mungo HOM05D004870 ORTHO05D006061 1.0e-220 770.0 456 84.9
PGSC0003DMG401016396 Solanum tuberosum HOM05D004870 ORTHO05D006061 1.3e-220 769.6 453 85.0
COL.COLO4_33098 Corchorus olitorius HOM05D004870 ORTHO05D006061 1.7e-220 769.2 456 84.9
THA.LOC104800685 Tarenaya hassleriana HOM05D004870 ORTHO05D006061 1.7e-220 769.2 461 84.8
Phvul.007G014700 Phaseolus vulgaris HOM05D004870 ORTHO05D006061 3.9e-220 768.1 456 84.6
Solyc01g008290.3 Solanum lycopersicum HOM05D004870 ORTHO05D006061 3.9e-220 768.1 459 83.4
DCAR_026881 Daucus carota HOM05D004870 ORTHO05D006061 5.0e-220 767.7 456 84.4
Sopen01g003810 Solanum pennellii HOM05D004870 ORTHO05D006061 5.0e-220 767.7 459 83.4
MD10G1280100 Malus domestica HOM05D004870 ORTHO05D006061 1.9e-219 765.8 456 84.0
Medtr1g114530 Medicago truncatula HOM05D004870 ORTHO05D006061 1.2e-218 763.1 456 83.8
HanXRQChr01g0018971 Helianthus annuus HOM05D004870 ORTHO05D006061 2.8e-218 761.9 461 83.7
ClCG01G008090 Citrullus lanatus HOM05D004870 ORTHO05D006061 8.1e-218 760.4 456 83.8
PSO339G5988 Papaver somniferum HOM05D004870 ORTHO05D006061 8.1e-218 760.4 463 81.4
TPR.G4052 Trifolium pratense HOM05D004870 ORTHO05D006061 1.1e-217 760.0 456 83.1
Lj5g0006106 Lotus japonicus HOM05D004870 ORTHO05D006061 1.4e-217 759.6 456 83.6
CsaV3_1G039280 Cucumis sativus L. HOM05D004870 ORTHO05D006061 1.8e-217 759.2 456 83.3
Cc11_g00600 Coffea canephora HOM05D004870 ORTHO05D006061 2.3e-217 758.8 421 88.6
MELO3C005067.2 Cucumis melo HOM05D004870 ORTHO05D006061 3.1e-217 758.4 456 83.3
arahy.Tifrunner.gnm1.ann1.NQ58Z6 Arachis hypogaea HOM05D004870 ORTHO05D006061 4.0e-217 758.1 458 83.8
Sed0016006 Sechium edule HOM05D004870 ORTHO05D006061 4.0e-217 758.1 456 82.7
Ca_11257_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 5.2e-217 757.7 456 83.6
RcHm_v2.0_Chr5g0010781 Rosa chinensis HOM05D004870 ORTHO05D006061 6.8e-217 757.3 460 82.8
AL6G34560 Arabidopsis lyrata HOM05D004870 ORTHO05D006061 8.9e-217 756.9 457 83.2
arahy.Tifrunner.gnm1.ann1.GVRL8L Arachis hypogaea HOM05D004870 ORTHO05D006061 8.9e-217 756.9 458 83.8
Lsat_1_v5_gn_1_81660 Lactuca sativa HOM05D004870 ORTHO05D006061 8.9e-217 756.9 454 83.5
Cfa008769 Carpinus fangiana HOM05D004870 ORTHO05D006061 1.5e-216 756.1 437 86.7
Carub.0006s2107 Capsella rubella HOM05D004870 ORTHO05D006061 2.0e-216 755.7 457 83.2
CsaV3_5G020740 Cucumis sativus L. HOM05D004870 ORTHO05D006061 2.6e-216 755.4 456 82.9
Migut.N00083 Erythranthe guttata HOM05D004870 ORTHO05D006061 4.4e-216 754.6 466 82.2
AT5G23300 Arabidopsis thaliana HOM05D004870 ORTHO05D006061 1.3e-215 753.1 457 82.7
ECA234G2132 Erigeron canadensis HOM05D004870 ORTHO05D006061 1.3e-215 753.1 454 83.0
Psat6g233800 Pisum sativum HOM05D004870 ORTHO05D006061 2.2e-215 752.3 456 83.3
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 2.9e-215 751.9 425 87.3
CARHR190240 Cardamine hirsuta HOM05D004870 ORTHO05D006061 2.9e-215 751.9 458 82.1
DCAR_002602 Daucus carota HOM05D004870 ORTHO05D006061 3.7e-215 751.5 483 79.9
Hund08594 Selenicereus undatus HOM05D004870 ORTHO05D006061 4.9e-215 751.1 501 78.0
Lalb_Chr02g0143631 Lupinus albus HOM05D004870 ORTHO05D006061 6.4e-215 750.7 452 83.8
CDE05G3274 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 1.1e-214 750.0 456 81.8
Thhalv10004171m.g Eutrema salsugineum HOM05D004870 ORTHO05D006061 2.4e-214 748.8 457 82.3
FAN25G2081 Fragaria x ananassa HOM05D004870 ORTHO05D006061 2.4e-214 748.8 462 82.0
GSVIVG01026142001 Vitis vinifera HOM05D004870 ORTHO05D006061 9.2e-214 746.9 461 83.7
FvH4_3g07800 Fragaria vesca HOM05D004870 ORTHO05D006061 1.6e-213 746.1 462 81.8
FAN16G1105 Fragaria x ananassa HOM05D004870 ORTHO05D006061 1.6e-213 746.1 462 81.6
Sp2g23850 Schrenkiella parvula HOM05D004870 ORTHO05D006061 1.6e-213 746.1 457 82.3
Sabra05G0073800 Salix brachista HOM05D004870 ORTHO05D006061 3.5e-213 745.0 506 77.1
Aa31LG11G2760 Aethionema arabicum HOM05D004870 ORTHO05D006061 4.6e-213 744.6 465 82.8
A09p07010 Brassica napus HOM05D004870 ORTHO05D006061 7.8e-213 743.8 455 81.8
BraA09t36349Z Brassica rapa HOM05D004870 ORTHO05D006061 7.8e-213 743.8 455 81.5
FAN21G1781 Fragaria x ananassa HOM05D004870 ORTHO05D006061 7.8e-213 743.8 462 81.6
FAN11G2678 Fragaria x ananassa HOM05D004870 ORTHO05D006061 1.3e-212 743.0 462 81.6
ATR0618G304 Amborella trichopoda HOM05D004870 ORTHO05D006061 6.6e-212 740.7 456 80.3
HPP92_014771 Vanilla planifolia HOM05D004870 ORTHO05D006061 8.6e-212 740.3 428 84.6
PGR142G2596 Punica granatum HOM05D004870 ORTHO05D006061 1.1e-211 740.0 422 87.2
Atru.chr11.1102 Acer truncatum HOM05D004870 ORTHO05D006061 1.5e-211 739.6 435 86.4
Atru.chr11.1106 Acer truncatum HOM05D004870 ORTHO05D006061 1.5e-211 739.6 435 86.4
SGA_v2.0_scaffold91G28011 Striga asiatica HOM05D004870 ORTHO05D006061 7.3e-211 737.3 466 81.1
Ah.08g211980 Amaranthus hybridus HOM05D004870 ORTHO05D006061 1.2e-210 736.5 422 86.3
C07p44260 Brassica napus HOM05D004870 ORTHO05D006061 2.1e-210 735.7 458 81.9
BolC7t44949H Brassica oleracea HOM05D004870 ORTHO05D006061 2.1e-210 735.7 458 81.9
A06p34260 Brassica napus HOM05D004870 ORTHO05D006061 1.1e-209 733.4 458 81.7
BraA06t26358Z Brassica rapa HOM05D004870 ORTHO05D006061 1.1e-209 733.4 458 81.7
C09p07820 Brassica napus HOM05D004870 ORTHO05D006061 1.8e-209 732.6 459 80.6
BolC9t53698H Brassica oleracea HOM05D004870 ORTHO05D006061 1.8e-209 732.6 459 80.6
EL10Ac7g17331 Beta vulgaris HOM05D004870 ORTHO05D006061 4.0e-209 731.5 427 85.7
SalBow5G5328 Salvia bowleyana HOM05D004870 ORTHO05D006061 2.6e-208 728.8 465 80.4
SGA_v2.0_scaffold428G51528 Striga asiatica HOM05D004870 ORTHO05D006061 7.6e-208 727.2 479 78.3
Os04g0676300 Oryza sativa ssp. japonica HOM05D004870 ORTHO05D006061 5.4e-206 721.1 419 84.0
Rhsim09G0069200 Rhododendron simsii HOM05D004870 ORTHO05D006061 1.3e-204 716.5 438 82.4
Nn3g18601 Nelumbo nucifera HOM05D004870 ORTHO05D006061 1.1e-203 713.4 397 90.4
Zm00001eb433680 Zea mays HOM05D004870 ORTHO05D006061 5.6e-203 711.1 463 76.5
Lj3A847T44 Lonicera japonica HOM05D004870 ORTHO05D006061 4.7e-202 708.0 391 88.7
Oeu063362.5 Olea europaea HOM05D004870 ORTHO05D006061 1.5e-200 703.0 481 75.7
AUR62030167 Chenopodium quinoa HOM05D004870 ORTHO05D006061 2.3e-196 689.1 384 89.1
AUR62002708 Chenopodium quinoa HOM05D004870 ORTHO05D006061 1.6e-194 682.9 384 88.0
QL06p048547 Quercus lobata HOM05D004870 ORTHO05D006061 3.6e-194 681.8 524 69.7
Prupe.6G003700 Prunus persica HOM05D004870 ORTHO05D006061 9.9e-192 673.7 455 76.0
Nitab4.5_0006274g0020 Nicotiana tabacum HOM05D004870 ORTHO05D006061 1.3e-191 673.3 460 75.4
HanXRQChr01g0018951 Helianthus annuus HOM05D004870 ORTHO05D006061 4.6e-189 664.8 464 73.5
BcaC04g23488 Brassica carinata HOM05D004870 ORTHO05D006061 3.0e-188 662.1 460 75.9
Lsat_1_v5_gn_1_81640 Lactuca sativa HOM05D004870 ORTHO05D006061 3.0e-188 662.1 453 75.9
Peaxi162Scf00021g02316 Petunia axillaris HOM05D004870 ORTHO05D006061 3.0e-188 662.1 457 75.3
BcaB04g19879 Brassica carinata HOM05D004870 ORTHO05D006061 2.8e-186 655.6 459 73.4
Duzib248G0882 Durio zibethinus HOM05D004870 ORTHO05D006061 2.4e-182 642.5 457 73.3
unitig_749.g13388 Utricularia gibba HOM05D004870 ORTHO05D006061 2.4e-182 642.5 414 78.5
ECA248G2791 Erigeron canadensis HOM05D004870 ORTHO05D006061 7.1e-182 641.0 453 72.6
SMO351G0256 Selaginella moellendorffii HOM05D004870 ORTHO05D006061 4.6e-181 638.3 413 77.0
Mapoly0020s0155 Marchantia polymorpha HOM05D004870 ORTHO05D006061 6.9e-177 624.4 461 70.3
Pp3c9_12870 Physcomitrium patens HOM05D004870 ORTHO05D006061 6.9e-177 624.4 409 73.8
Nitab4.5_0000069g0140 Nicotiana tabacum HOM05D004870 ORTHO05D006061 3.9e-172 608.6 491 68.0
Pp3c15_6200 Physcomitrium patens HOM05D004870 ORTHO05D006061 1.5e-171 606.7 410 72.4
SHI28437 Sapria himalayana HOM05D004870 ORTHO05D006061 8.2e-162 574.3 425 71.3
vmacro15993 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 1.4e-161 573.5 587 57.1
MELO3C015352.2 Cucumis melo HOM05D004870 ORTHO05D006061 1.9e-150 536.6 330 82.7
CBR_g49488 Chara braunii HOM05D004870 ORTHO05D006061 8.8e-148 527.7 427 60.0
CDE05G3051 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 2.9e-143 512.7 330 78.8
CBR_g53542 Chara braunii HOM05D004870 ORTHO05D006061 3.4e-131 472.6 410 57.8
PSO339G2837 Papaver somniferum HOM05D004870 ORTHO05D006061 1.3e-127 460.7 401 60.6
Cre03.g199423 Chlamydomonas reinhardtii HOM05D004870 ORTHO05D006061 1.3e-122 444.1 369 61.0
Potri.007G074201 Populus trichocarpa HOM05D004870 ORTHO05D006061 1.1e-113 414.5 252 83.7
AagrBONN_evm.TU.Sc2ySwM_340.305 Anthoceros agrestis HOM05D004870 ORTHO05D006061 9.2e-113 411.4 262 78.6
MCO08G060 Micromonas commoda HOM05D004870 ORTHO05D006061 8.3e-106 388.3 450 47.1
AagrBONN_evm.TU.Sc2ySwM_228.5917 Anthoceros agrestis HOM05D004870 ORTHO05D006061 1.1e-105 387.9 449 49.4
PSO782G3529 Papaver somniferum HOM05D004870 ORTHO05D006061 5.6e-86 322.4 310 57.4
Potri.007G074101 Populus trichocarpa HOM05D004870 ORTHO05D006061 5.4e-81 305.8 188 84.0
Thecc.02G156000 Theobroma cacao HOM05D004870 ORTHO05D006061 7.1e-81 305.4 173 89.6
Haze_27018 Corylus avellana HOM05D004870 ORTHO05D006061 1.9e-78 297.4 405 42.2
Ca_29057_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 4.8e-61 239.6 360 40.3
SEGI_23530 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 6.2e-61 239.2 169 69.8
Cfa021670 Carpinus fangiana HOM05D004870 ORTHO05D006061 3.7e-45 186.8 387 34.9
SEGI_39125 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 6.3e-45 186.0 117 78.6
C08p27210 Brassica napus HOM05D004870 ORTHO05D006061 3.3e-30 137.1 83 79.5
vmacro15994 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 6.3e-29 132.9 72 86.1
Thecc.02G156100 Theobroma cacao HOM05D004870 ORTHO05D006061 5.3e-28 129.8 69 84.1
RcHm_v2.0_Chr5g0064321 Rosa chinensis HOM05D004870 ORTHO05D006061 2.0e-27 127.9 81 84.0
C04p22220 Brassica napus HOM05D004870 ORTHO05D006061 8.3e-21 105.9 100 61.0
BcaC02g11010 Brassica carinata HOM05D004870 ORTHO05D006061 2.4e-20 104.4 76 69.7
RcHm_v2.0_Chr5g0050031 Rosa chinensis HOM05D004870 ORTHO05D006061 2.4e-20 104.4 66 83.3
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 2.1e-16 91.3 296 26.0
arahy.Tifrunner.gnm1.ann1.7S4D4S Arachis hypogaea HOM05D004870 ORTHO05D000194 1.8e-15 88.2 61 73.8
PGR142G1834 Punica granatum HOM05D004870 ORTHO05D006061 6.8e-15 86.3 59 76.3
CDE05G3312 Ceratophyllum demersum HOM05D004870 ORTHO05D130477 2.4e-12 77.8 83 53.0
RcHm_v2.0_Chr5g0050041 Rosa chinensis HOM05D004870 ORTHO05D347201 2.9e-10 70.9 50 68.0
AUR62002710 Chenopodium quinoa HOM05D004870 ORTHO05D138226 1.8e-07 61.6 65 55.4
C02p39510 Brassica napus HOM05D000461 ORTHO05D016800 5.2e-07 60.1 46 60.9
BolC2t09964H Brassica oleracea HOM05D000461 ORTHO05D016800 5.2e-07 60.1 46 60.9
unitig_27.g25082 Utricularia gibba HOM05D002170 ORTHO05D007478 1.5e-06 58.5 205 27.8
CiPaw.16G097200 Carya illinoinensis HOM05D002170 ORTHO05D007478 2.6e-06 57.8 158 27.8
PGR044G0130 Punica granatum HOM05D002170 ORTHO05D007478 2.6e-06 57.8 159 30.2
TWI81G0098 Tripterygium wilfordii HOM05D002170 ORTHO05D007478 3.4e-06 57.4 157 28.7
HPP92_007961 Vanilla planifolia HOM05D002170 ORTHO05D007478 3.4e-06 57.4 223 24.7
Lalb_Chr22g0353421 Lupinus albus HOM05D002170 ORTHO05D007478 4.4e-06 57.0 157 27.4
EL10Ac2g03531 Beta vulgaris HOM05D002170 ORTHO05D007478 5.7e-06 56.6 156 28.2
MELO3C002149.2 Cucumis melo HOM05D002170 ORTHO05D007478 7.5e-06 56.2 157 28.0
QL10p031496 Quercus lobata HOM05D002170 ORTHO05D007478 7.5e-06 56.2 158 27.8
ClCG04G010450 Citrullus lanatus HOM05D002170 ORTHO05D007478 9.8e-06 55.8 157 28.0
Sabra15G0025500 Salix brachista HOM05D002170 ORTHO05D007478 9.8e-06 55.8 157 28.0
Zm00001eb253890 Zea mays HOM05D002170 ORTHO05D007478 9.8e-06 55.8 204 27.5


User provided reference genes

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