Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2498 Trochodendron aralioides HOM05D006973 ORTHO05D008636 4.6e-109 397.9 201 100.0
Nn6g34359 Nelumbo nucifera HOM05D006973 ORTHO05D008636 4.0e-28 129.0 143 55.9
Prupe.3G172700 Prunus persica HOM05D006973 ORTHO05D008636 7.6e-27 124.8 138 49.3
Dinv21566 Davidia involucrata HOM05D006973 ORTHO05D008636 5.4e-25 118.6 114 57.9
Duzib187G1733 Durio zibethinus HOM05D006973 ORTHO05D008636 1.9e-22 110.2 180 40.6
Manes.02G084300 Manihot esculenta HOM05D006973 ORTHO05D008636 5.6e-22 108.6 137 45.3
Actinidia32515 Actinidia chinensis HOM05D006973 ORTHO05D008636 4.7e-21 105.5 136 47.1
Rhsim06G0116300 Rhododendron simsii HOM05D006973 ORTHO05D008636 1.8e-20 103.6 129 45.7
Potri.005G201500 Populus trichocarpa HOM05D006973 ORTHO05D008636 2.4e-20 103.2 140 47.1
Cfa021245 Carpinus fangiana HOM05D006973 ORTHO05D008636 9.0e-20 101.3 117 52.1
Sabra02G0048600 Salix brachista HOM05D006973 ORTHO05D008636 1.2e-19 100.9 141 45.4
Aqoxy4G00147 Aquilegia oxysepala HOM05D006973 ORTHO05D008636 3.4e-19 99.4 98 56.1
FAN02G1229 Fragaria x ananassa HOM05D006973 ORTHO05D008636 5.8e-19 98.6 140 42.9
Nn3g20922 Nelumbo nucifera HOM05D006973 ORTHO05D008636 5.8e-19 98.6 142 44.4
Haze_13497 Corylus avellana HOM05D006973 ORTHO05D008636 7.6e-19 98.2 66 69.7
FvH4_6g38230 Fragaria vesca HOM05D006973 ORTHO05D008636 9.9e-19 97.8 140 42.9
FAN05G1052 Fragaria x ananassa HOM05D006973 ORTHO05D008636 9.9e-19 97.8 142 42.3
FAN14G5571 Fragaria x ananassa HOM05D006973 ORTHO05D008636 9.9e-19 97.8 140 42.9
Potri.002G060100 Populus trichocarpa HOM05D006973 ORTHO05D008636 2.2e-18 96.7 139 44.6
Thecc.01G161800 Theobroma cacao HOM05D006973 ORTHO05D008636 4.9e-18 95.5 129 46.5
FAN09G4519 Fragaria x ananassa HOM05D006973 ORTHO05D008636 1.1e-17 94.4 136 42.6
Gohir.D11G064600 Gossypium hirsutum HOM05D006973 ORTHO05D008636 4.2e-17 92.4 63 66.7
Gorai.007G069800 Gossypium raimondii HOM05D006973 ORTHO05D008636 4.2e-17 92.4 63 66.7
QL08p044096 Quercus lobata HOM05D006973 ORTHO05D008636 7.1e-17 91.7 152 40.8
VMungo0647G1950 Vigna mungo HOM05D006973 ORTHO05D008636 9.3e-17 91.3 151 40.4
Atru.chr6.2093 Acer truncatum HOM05D006973 ORTHO05D008636 1.6e-16 90.5 59 66.1
RcHm_v2.0_Chr2g0151491 Rosa chinensis HOM05D006973 ORTHO05D008636 2.1e-16 90.1 158 38.6
Gohir.A11G060500 Gossypium hirsutum HOM05D006973 ORTHO05D008636 3.5e-16 89.4 63 63.5
Peaxi162Scf00111g00009 Petunia axillaris HOM05D006973 ORTHO05D008636 3.5e-16 89.4 101 50.5
ClCG09G022400 Citrullus lanatus HOM05D006973 ORTHO05D008636 4.6e-16 89.0 107 48.6
Glyma.02G286900 Glycine max HOM05D006973 ORTHO05D008636 6.0e-16 88.6 66 62.1
Duzib147G0021 Durio zibethinus HOM05D006973 ORTHO05D008636 1.0e-15 87.8 137 38.7
Glyma.14G028000 Glycine max HOM05D006973 ORTHO05D008636 1.0e-15 87.8 59 69.5
CsaV3_6G038070 Cucumis sativus L. HOM05D006973 ORTHO05D008636 1.3e-15 87.4 111 47.7
MELO3C014471.2 Cucumis melo HOM05D006973 ORTHO05D008636 3.0e-15 86.3 108 47.2
Nitab4.5_0001675g0100 Nicotiana tabacum HOM05D006973 ORTHO05D008636 3.0e-15 86.3 98 45.9
Nitab4.5_0003934g0010 Nicotiana tabacum HOM05D006973 ORTHO05D008636 8.7e-15 84.7 62 64.5
MBI07_g21782_MAGBIO Magnolia biondii HOM05D006973 ORTHO05D008636 1.1e-14 84.3 65 61.5
MBI07_g41313_MAGBIO Magnolia biondii HOM05D006973 ORTHO05D008636 1.1e-14 84.3 65 61.5
Medtr5g091690 Medicago truncatula HOM05D006973 ORTHO05D008636 1.1e-14 84.3 64 59.4
Phvul.008G191400 Phaseolus vulgaris HOM05D006973 ORTHO05D008636 1.1e-14 84.3 151 38.4
TPR.G12665 Trifolium pratense HOM05D006973 ORTHO05D008636 1.9e-14 83.6 59 64.4
Lalb_Chr04g0248771 Lupinus albus HOM05D006973 ORTHO05D008636 4.3e-14 82.4 147 39.5
PGR042G1786 Punica granatum HOM05D006973 ORTHO05D008636 4.3e-14 82.4 58 67.2
Oeu040038.1 Olea europaea HOM05D006973 ORTHO05D008636 5.6e-14 82.0 70 58.6
CAN.G585.39 Capsicum annuum HOM05D006973 ORTHO05D008636 7.3e-14 81.6 62 62.9
Thhalv10006323m.g Eutrema salsugineum HOM05D006973 ORTHO05D008636 1.3e-13 80.9 70 52.9
Sed0009997 Sechium edule HOM05D006973 ORTHO05D008636 1.3e-13 80.9 64 59.4
Ciclev10033026m.g Citrus clementina HOM05D006973 ORTHO05D008636 2.1e-13 80.1 59 62.7
Lalb_Chr10g0106711 Lupinus albus HOM05D006973 ORTHO05D008636 2.1e-13 80.1 59 59.3
Lalb_Chr17g0348291 Lupinus albus HOM05D006973 ORTHO05D008636 2.8e-13 79.7 59 59.3
PGSC0003DMG400017344 Solanum tuberosum HOM05D006973 ORTHO05D008636 3.6e-13 79.3 59 62.7
CSS0041461 Camellia sinensis var. sinensis HOM05D006973 ORTHO05D008636 4.8e-13 79.0 64 60.9
Sp5g04010 Schrenkiella parvula HOM05D006973 ORTHO05D008636 8.1e-13 78.2 72 50.0
Solyc07g056360.1 Solanum lycopersicum HOM05D006973 ORTHO05D008636 8.1e-13 78.2 59 59.3
CANSAT64G0305 Cannabis sativa HOM05D006973 ORTHO05D008636 1.1e-12 77.8 53 66.0
BcaB06g29268 Brassica carinata HOM05D006973 ORTHO05D008636 1.4e-12 77.4 100 41.0
BcaB06g29270 Brassica carinata HOM05D006973 ORTHO05D008636 1.4e-12 77.4 100 41.0
MSTRG.14293 Avicennia marina HOM05D006973 ORTHO05D008636 1.8e-12 77.0 108 42.6
BcaB02g08235 Brassica carinata HOM05D006973 ORTHO05D008636 1.8e-12 77.0 82 45.1
BcaC02g07217 Brassica carinata HOM05D006973 ORTHO05D008636 1.8e-12 77.0 100 41.0
A04p32440 Brassica napus HOM05D006973 ORTHO05D008636 1.8e-12 77.0 100 41.0
C04p69950 Brassica napus HOM05D006973 ORTHO05D008636 1.8e-12 77.0 100 41.0
BolC4t28495H Brassica oleracea HOM05D006973 ORTHO05D008636 1.8e-12 77.0 100 41.0
BraA04t18696Z Brassica rapa HOM05D006973 ORTHO05D008636 1.8e-12 77.0 100 41.0
DCAR_013315 Daucus carota HOM05D006973 ORTHO05D008636 1.8e-12 77.0 73 54.8
Sopen07g029740 Solanum pennellii HOM05D006973 ORTHO05D008636 1.8e-12 77.0 59 57.6
A03p23820 Brassica napus HOM05D006973 ORTHO05D008636 2.4e-12 76.6 92 42.4
BraA03t11597Z Brassica rapa HOM05D006973 ORTHO05D008636 2.4e-12 76.6 92 42.4
Carub.0004s2531 Capsella rubella HOM05D006973 ORTHO05D008636 2.4e-12 76.6 65 52.3
Cc05_g09430 Coffea canephora HOM05D006973 ORTHO05D008636 2.4e-12 76.6 52 69.2
Oeu020059.1 Olea europaea HOM05D006973 ORTHO05D008636 2.4e-12 76.6 156 35.3
BraA05t19306Z Brassica rapa HOM05D006973 ORTHO05D008636 3.1e-12 76.3 69 52.2
BcaC02g12446 Brassica carinata HOM05D006973 ORTHO05D008636 5.3e-12 75.5 69 50.7
A05p03160 Brassica napus HOM05D006973 ORTHO05D008636 5.3e-12 75.5 69 52.2
C04p03810 Brassica napus HOM05D006973 ORTHO05D008636 5.3e-12 75.5 69 50.7
BolC4t22017H Brassica oleracea HOM05D006973 ORTHO05D008636 5.3e-12 75.5 69 50.7
LjContig00310g0018130 Lotus japonicus HOM05D006973 ORTHO05D008636 5.3e-12 75.5 138 41.3
AT2G42870 Arabidopsis thaliana HOM05D006973 ORTHO05D008636 9.0e-12 74.7 59 55.9
Carub.0005s2563 Capsella rubella HOM05D006973 ORTHO05D008636 9.0e-12 74.7 60 56.7
A09p51360 Brassica napus HOM05D006973 ORTHO05D008636 1.2e-11 74.3 83 45.8
BraA09t40577Z Brassica rapa HOM05D006973 ORTHO05D008636 1.2e-11 74.3 83 45.8
AL4G41480 Arabidopsis lyrata HOM05D006973 ORTHO05D008636 2.0e-11 73.6 59 54.2
AL713U10010 Arabidopsis lyrata HOM05D006973 ORTHO05D008636 2.0e-11 73.6 59 54.2
BcaC02g10032 Brassica carinata HOM05D006973 ORTHO05D008636 2.0e-11 73.6 82 43.9
C04p33710 Brassica napus HOM05D006973 ORTHO05D008636 2.0e-11 73.6 82 43.9
BolC4t24939H Brassica oleracea HOM05D006973 ORTHO05D008636 2.0e-11 73.6 82 43.9
Thhalv10017430m.g Eutrema salsugineum HOM05D006973 ORTHO05D008636 2.0e-11 73.6 59 54.2
A04p02340 Brassica napus HOM05D006973 ORTHO05D008636 2.6e-11 73.2 95 42.1
CARHR169260 Cardamine hirsuta HOM05D006973 ORTHO05D008636 2.6e-11 73.2 66 51.5
BcaC07g40229 Brassica carinata HOM05D006973 ORTHO05D008636 3.4e-11 72.8 62 53.2
Aa31LG1G24640 Aethionema arabicum HOM05D006973 ORTHO05D008636 4.5e-11 72.4 60 53.3
BraA04t15963Z Brassica rapa HOM05D006973 ORTHO05D008636 4.5e-11 72.4 82 42.7
BcaB01g03419 Brassica carinata HOM05D006973 ORTHO05D008636 5.8e-11 72.0 57 56.1
AT3G58850 Arabidopsis thaliana HOM05D006973 ORTHO05D008636 7.6e-11 71.6 60 53.3
Sp4g25000 Schrenkiella parvula HOM05D006973 ORTHO05D008636 7.6e-11 71.6 56 57.1
C03p28410 Brassica napus HOM05D006973 ORTHO05D008636 9.9e-11 71.2 99 37.4
BolC3t15210H Brassica oleracea HOM05D006973 ORTHO05D008636 9.9e-11 71.2 99 37.4
CARHR137940 Cardamine hirsuta HOM05D006973 ORTHO05D008636 1.3e-10 70.9 66 53.0
AL5G40650 Arabidopsis lyrata HOM05D006973 ORTHO05D008636 3.8e-10 69.3 60 51.7
MBI10_g03529_MAGBIO Magnolia biondii HOM05D006973 ORTHO05D008636 3.8e-10 69.3 55 58.2
BcaC07g40299 Brassica carinata HOM05D006973 ORTHO05D008636 4.9e-10 68.9 56 57.1
C08p34140 Brassica napus HOM05D006973 ORTHO05D008636 4.9e-10 68.9 56 57.1
BolC8t51013H Brassica oleracea HOM05D006973 ORTHO05D008636 4.9e-10 68.9 56 57.1
CDE04G0049 Ceratophyllum demersum HOM05D006973 ORTHO05D008636 3.2e-09 66.2 64 51.6
THA.LOC104803237 Tarenaya hassleriana HOM05D006973 ORTHO05D008636 2.7e-08 63.2 52 50.0
arahy.Tifrunner.gnm1.ann1.9T2B0R Arachis hypogaea HOM05D006973 ORTHO05D008636 4.6e-08 62.4 56 50.0
arahy.Tifrunner.gnm1.ann1.D7Q1BT Arachis hypogaea HOM05D006973 ORTHO05D008636 4.6e-08 62.4 54 50.0
arahy.Tifrunner.gnm1.ann1.SG1KTY Arachis hypogaea HOM05D006973 ORTHO05D008636 4.6e-08 62.4 54 50.0
Aa31LG10G13410 Aethionema arabicum HOM05D006973 ORTHO05D008636 7.9e-08 61.6 56 50.0
TAR365G0268 Trochodendron aralioides HOM05D006547 ORTHO05D008112 1.0e-07 61.2 55 49.1
QL12p019056 Quercus lobata HOM05D006547 ORTHO05D008112 1.3e-07 60.8 47 57.4
ATR0693G012 Amborella trichopoda HOM05D006547 ORTHO05D008112 1.8e-07 60.5 97 37.1
Potri.014G118300 Populus trichocarpa HOM05D006547 ORTHO05D008112 1.8e-07 60.5 45 57.8
Potri.002G193300 Populus trichocarpa HOM05D006547 ORTHO05D008112 2.3e-07 60.1 55 49.1
Sabra02G0162800 Salix brachista HOM05D006547 ORTHO05D008112 5.1e-07 58.9 55 49.1
Lalb_Chr02g0141791 Lupinus albus HOM05D006547 ORTHO05D008112 8.7e-07 58.2 47 55.3
MBI18_g22340_MAGBIO Magnolia biondii HOM05D006547 ORTHO05D008112 2.5e-06 56.6 45 51.1
Eucgr.A01970 Eucalyptus grandis HOM05D006973 ORTHO05D008636 3.3e-06 56.2 66 45.5
Lj5g0010023 Lotus japonicus HOM05D006547 ORTHO05D008112 3.3e-06 56.2 44 52.3
VMungo0720G0102 Vigna mungo HOM05D006547 ORTHO05D008112 3.3e-06 56.2 45 53.3
Nn4g25552 Nelumbo nucifera HOM05D006547 ORTHO05D008112 4.3e-06 55.8 45 53.3
Oeu038038.1 Olea europaea HOM05D006547 ORTHO05D008112 4.3e-06 55.8 88 36.4
Ciclev10022819m.g Citrus clementina HOM05D006547 ORTHO05D008112 5.6e-06 55.5 53 47.2
Medtr1g096530 Medicago truncatula HOM05D006547 ORTHO05D008112 5.6e-06 55.5 46 56.5
Sabra14G0087800 Salix brachista HOM05D006547 ORTHO05D008112 5.6e-06 55.5 45 53.3
MBI19_g03260_MAGBIO Magnolia biondii HOM05D001624 ORTHO05D001530 7.4e-06 55.1 49 46.9
ATR0693G249 Amborella trichopoda HOM05D001624 ORTHO05D001530 9.6e-06 54.7 63 41.3
Ca_10619_v3 Cicer arietinum L. HOM05D006547 ORTHO05D008112 9.6e-06 54.7 55 47.3
Glyma.20G175000 Glycine max HOM05D006547 ORTHO05D008112 9.6e-06 54.7 45 51.1
Lalb_Chr03g0036161 Lupinus albus HOM05D006547 ORTHO05D008112 9.6e-06 54.7 57 47.4


User provided reference genes

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