Gene: Carub.0005s2563

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0005s2563
  • Transcript Identifier Carub.0005s2563.1
  • Gene Type Coding gene
  • Location scaffold_5 : 12057620-12057979 : negative

Gene Family Information

  • ID HOM05D006973
  • #Genes/#Species 115/66
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0005s2563.v1.1
  • pacid 39225604
  • synonym Carubv10019589m.g

Descriptions

  • Description PTHR33124//PTHR33124:SF3 - FAMILY NOT NAMED // EXPRESSED PROTEIN
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0045892
ISO
PLAZA Tree-based Orthologynegative regulation of transcription, DNA-templated AT2G42870
GO:0009641
ISO
PLAZA Integrative Orthologyshade avoidance AT3G58850
GO:0032502
ISO
PLAZA Integrative Orthologydevelopmental process AT3G58850
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT3G58850

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003712
ISO
PLAZA Tree-based Orthologytranscription coregulator activity AT2G42870
GO:0042803
ISO
PLAZA Tree-based Orthologyprotein homodimerization activity AT2G42870

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G58850

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044549 Transcription factor IBH1-like, bHLH domain
IPR044660 Transcription factor IBH1-like
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)