Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2114 Trochodendron aralioides HOM05D003384 ORTHO05D005024 0.0e+00 1127.1 563 100.0
TAR629G0426 Trochodendron aralioides HOM05D003384 ORTHO05D005024 3.9e-214 748.4 440 85.9
TAR633G2052 Trochodendron aralioides HOM05D003384 ORTHO05D005024 1.5e-213 746.5 440 86.1
Dinv10578 Davidia involucrata HOM05D003384 ORTHO05D005024 4.3e-197 691.8 565 65.5
Dinv42277 Davidia involucrata HOM05D003384 ORTHO05D005024 2.8e-196 689.1 439 78.8
Prupe.1G542100 Prunus persica HOM05D003384 ORTHO05D005024 1.1e-195 687.2 468 74.1
Eucgr.I00206 Eucalyptus grandis HOM05D003384 ORTHO05D005024 1.8e-195 686.4 468 73.9
Prupe.8G024000 Prunus persica HOM05D003384 ORTHO05D005024 2.4e-195 686.0 468 74.1
Potri.008G058600 Populus trichocarpa HOM05D003384 ORTHO05D005024 3.1e-195 685.6 468 73.9
MD03G1203100 Malus domestica HOM05D003384 ORTHO05D005024 6.9e-195 684.5 436 76.8
FAN13G0754 Fragaria x ananassa HOM05D003384 ORTHO05D005024 1.5e-194 683.3 468 73.5
Rhsim10G0184100 Rhododendron simsii HOM05D003384 ORTHO05D005024 3.4e-194 682.2 471 74.3
CSS0047277 Camellia sinensis var. sinensis HOM05D003384 ORTHO05D005024 1.0e-193 680.6 471 73.7
FAN04G2139 Fragaria x ananassa HOM05D003384 ORTHO05D005024 1.0e-193 680.6 468 73.1
MD04G1022300 Malus domestica HOM05D003384 ORTHO05D005024 1.0e-193 680.6 469 72.7
FAN18G2911 Fragaria x ananassa HOM05D003384 ORTHO05D005024 1.3e-193 680.2 468 73.1
Rhsim08G0242600 Rhododendron simsii HOM05D003384 ORTHO05D005024 1.3e-193 680.2 471 73.7
FvH4_5g19530 Fragaria vesca HOM05D003384 ORTHO05D005024 1.7e-193 679.9 468 73.3
FAN18G2272 Fragaria x ananassa HOM05D003384 ORTHO05D005024 1.7e-193 679.9 468 73.1
CSS0027778 Camellia sinensis var. sinensis HOM05D003384 ORTHO05D005024 2.2e-193 679.5 471 73.5
Manes.10G027300 Manihot esculenta HOM05D003384 ORTHO05D005024 5.0e-193 678.3 468 72.6
CiPaw.01G290900 Carya illinoinensis HOM05D003384 ORTHO05D005024 6.5e-193 677.9 468 72.6
FAN08G1276 Fragaria x ananassa HOM05D003384 ORTHO05D005024 3.2e-192 675.6 468 72.6
PSO837G0041 Papaver somniferum HOM05D003384 ORTHO05D005024 7.2e-192 674.5 471 72.2
Sabra10G0154400 Salix brachista HOM05D003384 ORTHO05D005024 7.2e-192 674.5 468 72.9
Ciclev10030516m.g Citrus clementina HOM05D003384 ORTHO05D005024 9.4e-192 674.1 468 72.6
Cc07_g16480 Coffea canephora HOM05D003384 ORTHO05D005024 1.2e-191 673.7 471 72.4
RcHm_v2.0_Chr7g0204141 Rosa chinensis HOM05D003384 ORTHO05D005024 1.2e-191 673.7 468 72.4
Potri.010G200200 Populus trichocarpa HOM05D003384 ORTHO05D005024 2.1e-191 672.9 436 76.8
PGSC0003DMG400010235 Solanum tuberosum HOM05D003384 ORTHO05D005024 2.7e-191 672.5 468 72.4
Haze_17110 Corylus avellana HOM05D003384 ORTHO05D005024 3.6e-191 672.2 436 75.0
PGR004G0663 Punica granatum HOM05D003384 ORTHO05D005024 4.7e-191 671.8 439 76.8
vmacro20478 Vaccinium macrocarpon HOM05D003384 ORTHO05D005024 6.1e-191 671.4 472 73.5
Cfa001433 Carpinus fangiana HOM05D003384 ORTHO05D005024 3.0e-190 669.1 436 74.8
Peaxi162Scf00668g00439 Petunia axillaris HOM05D003384 ORTHO05D005024 3.9e-190 668.7 468 71.6
Sopen02g021650 Solanum pennellii HOM05D003384 ORTHO05D005024 5.1e-190 668.3 468 71.8
Lj1C941G12 Lonicera japonica HOM05D003384 ORTHO05D005024 6.7e-190 667.9 439 76.5
QL08p061129 Quercus lobata HOM05D003384 ORTHO05D005024 6.7e-190 667.9 468 71.8
ECA246G5320 Erigeron canadensis HOM05D003384 ORTHO05D005024 1.1e-189 667.2 471 72.2
Solyc02g076720.3 Solanum lycopersicum HOM05D003384 ORTHO05D005024 1.1e-189 667.2 468 71.8
Sc09g0005970 Simmondsia chinensis HOM05D003384 ORTHO05D005024 1.5e-189 666.8 468 72.4
CAN.G370.86 Capsicum annuum HOM05D003384 ORTHO05D005024 2.6e-189 666.0 468 71.6
Lj8C80T4 Lonicera japonica HOM05D003384 ORTHO05D005024 3.3e-189 665.6 442 75.3
Ah.03g145450 Amaranthus hybridus HOM05D003384 ORTHO05D005024 4.4e-189 665.2 436 75.5
Peaxi162Scf00685g00122 Petunia axillaris HOM05D003384 ORTHO05D005024 4.4e-189 665.2 468 72.2
Lsat_1_v5_gn_6_96581 Lactuca sativa HOM05D003384 ORTHO05D005024 9.7e-189 664.1 470 71.9
SalBow6G5425 Salvia bowleyana HOM05D003384 ORTHO05D005024 1.3e-188 663.7 471 71.3
ClCG07G004540 Citrullus lanatus HOM05D003384 ORTHO05D005024 4.8e-188 661.8 468 70.5
HanXRQChr05g0161141 Helianthus annuus HOM05D003384 ORTHO05D005024 6.3e-188 661.4 472 71.2
Thecc.05G055600 Theobroma cacao HOM05D003384 ORTHO05D005024 6.3e-188 661.4 468 70.5
Nitab4.5_0001169g0010 Nicotiana tabacum HOM05D003384 ORTHO05D005024 3.1e-187 659.1 469 71.9
Migut.F00756 Erythranthe guttata HOM05D003384 ORTHO05D005024 4.1e-187 658.7 471 71.3
MBI14_g11677_MAGBIO Magnolia biondii HOM05D003384 ORTHO05D005024 5.3e-187 658.3 439 74.9
A07p40090 Brassica napus HOM05D003384 ORTHO05D005024 9.1e-187 657.5 468 70.7
BraA07t31553Z Brassica rapa HOM05D003384 ORTHO05D005024 9.1e-187 657.5 468 70.7
Nitab4.5_0000333g0100 Nicotiana tabacum HOM05D003384 ORTHO05D005024 1.2e-186 657.1 469 71.6
EL10Ac2g04005 Beta vulgaris HOM05D003384 ORTHO05D005024 2.6e-186 656.0 436 73.9
TWI18G1054 Tripterygium wilfordii HOM05D003384 ORTHO05D005024 2.6e-186 656.0 437 74.8
Aa31LG7G13860 Aethionema arabicum HOM05D003384 ORTHO05D005024 4.5e-186 655.2 439 74.0
SGA_v2.0_scaffold2G01034 Striga asiatica HOM05D003384 ORTHO05D005024 5.9e-186 654.8 471 70.3
BolC6t39873H Brassica oleracea HOM05D003384 ORTHO05D005024 7.7e-186 654.4 468 70.5
Hund07041 Selenicereus undatus HOM05D003384 ORTHO05D005024 1.0e-185 654.1 437 74.4
AT1G74260 Arabidopsis thaliana HOM05D003384 ORTHO05D005024 1.3e-185 653.7 439 73.6
AUR62034627 Chenopodium quinoa HOM05D003384 ORTHO05D005024 1.3e-185 653.7 468 70.9
CsaV3_5G010490 Cucumis sativus L. HOM05D003384 ORTHO05D005024 1.3e-185 653.7 468 69.4
Gohir.D04G115100 Gossypium hirsutum HOM05D003384 ORTHO05D005024 1.3e-185 653.7 468 70.3
AUR62009267 Chenopodium quinoa HOM05D003384 ORTHO05D005024 1.7e-185 653.3 468 70.7
AUR62002272 Chenopodium quinoa HOM05D003384 ORTHO05D005024 2.2e-185 652.9 468 70.7
COL.COLO4_27063 Corchorus olitorius HOM05D003384 ORTHO05D005024 2.2e-185 652.9 468 70.1
Glyma.11G221100 Glycine max HOM05D003384 ORTHO05D005024 2.2e-185 652.9 437 72.8
arahy.Tifrunner.gnm1.ann1.Z31J18 Arachis hypogaea HOM05D003384 ORTHO05D005024 2.9e-185 652.5 437 73.9
Gorai.009G419700 Gossypium raimondii HOM05D003384 ORTHO05D005024 2.9e-185 652.5 468 70.3
SalBow6G5500 Salvia bowleyana HOM05D003384 ORTHO05D005024 2.9e-185 652.5 471 69.9
ClCG10G005920 Citrullus lanatus HOM05D003384 ORTHO05D005024 3.8e-185 652.1 468 68.6
Sp5g29440 Schrenkiella parvula HOM05D003384 ORTHO05D005024 5.0e-185 651.7 439 73.3
C06p33470 Brassica napus HOM05D003384 ORTHO05D005024 6.5e-185 651.4 471 69.6
BolC6t38461H Brassica oleracea HOM05D003384 ORTHO05D005024 6.5e-185 651.4 471 69.6
AL2G34140 Arabidopsis lyrata HOM05D003384 ORTHO05D005024 8.5e-185 651.0 439 73.1
Duzib093G0913 Durio zibethinus HOM05D003384 ORTHO05D005024 8.5e-185 651.0 468 69.2
HanXRQChr08g0232581 Helianthus annuus HOM05D003384 ORTHO05D005024 8.5e-185 651.0 471 70.9
Sed0002627 Sechium edule HOM05D003384 ORTHO05D005024 8.5e-185 651.0 468 69.4
Gohir.A06G008900 Gossypium hirsutum HOM05D003384 ORTHO05D005024 1.4e-184 650.2 468 70.1
C06p48450 Brassica napus HOM05D003384 ORTHO05D005024 1.9e-184 649.8 468 70.1
CARHR067520 Cardamine hirsuta HOM05D003384 ORTHO05D005024 1.9e-184 649.8 439 73.6
Ca_17447_v3 Cicer arietinum L. HOM05D003384 ORTHO05D005024 1.9e-184 649.8 437 73.0
Ca_30022_v3 Cicer arietinum L. HOM05D003384 ORTHO05D005024 1.9e-184 649.8 437 73.0
Phvul.001G234500 Phaseolus vulgaris HOM05D003384 ORTHO05D005024 1.9e-184 649.8 437 72.5
BcaC08g46858 Brassica carinata HOM05D003384 ORTHO05D005024 2.5e-184 649.4 468 70.1
Glyma.18G036300 Glycine max HOM05D003384 ORTHO05D005024 2.5e-184 649.4 437 72.8
Carub.0002s2105 Capsella rubella HOM05D003384 ORTHO05D005024 3.2e-184 649.0 439 73.1
Lalb_Chr15g0084621 Lupinus albus HOM05D003384 ORTHO05D005024 3.2e-184 649.0 437 73.5
Thhalv10018011m.g Eutrema salsugineum HOM05D003384 ORTHO05D005024 4.2e-184 648.7 439 72.7
Lalb_Chr18g0053121 Lupinus albus HOM05D003384 ORTHO05D005024 5.5e-184 648.3 436 72.9
BcaC08g45597 Brassica carinata HOM05D003384 ORTHO05D005024 7.2e-184 647.9 438 73.1
BraA07t30586Z Brassica rapa HOM05D003384 ORTHO05D005024 7.2e-184 647.9 437 73.5
CDE05G1678 Ceratophyllum demersum HOM05D003384 ORTHO05D005024 7.2e-184 647.9 441 72.6
Gohir.A04G076000 Gossypium hirsutum HOM05D003384 ORTHO05D005024 9.4e-184 647.5 468 69.9
Phvul.009G004700 Phaseolus vulgaris HOM05D003384 ORTHO05D005024 9.4e-184 647.5 437 72.3
Lj2g0004466 Lotus japonicus HOM05D003384 ORTHO05D005024 1.6e-183 646.7 437 73.5
VMungo1309G0201 Vigna mungo HOM05D003384 ORTHO05D005024 2.1e-183 646.4 436 72.2
A07p29480 Brassica napus HOM05D003384 ORTHO05D005024 2.7e-183 646.0 437 73.2
TPR.G18022 Trifolium pratense HOM05D003384 ORTHO05D005024 2.7e-183 646.0 437 73.0
PSO782G4051 Papaver somniferum HOM05D003384 ORTHO05D005024 4.7e-183 645.2 439 72.4
Lj6g0002532 Lotus japonicus HOM05D003384 ORTHO05D005024 8.0e-183 644.4 437 72.8
Psat7g023040 Pisum sativum HOM05D003384 ORTHO05D005024 8.0e-183 644.4 436 73.2
DCAR_011724 Daucus carota HOM05D003384 ORTHO05D005024 1.0e-182 644.0 472 69.9
PSO478G4441 Papaver somniferum HOM05D003384 ORTHO05D005024 1.0e-182 644.0 439 72.2
THA.LOC104816583 Tarenaya hassleriana HOM05D003384 ORTHO05D005024 3.0e-182 642.5 468 69.7
TPR.G25489 Trifolium pratense HOM05D003384 ORTHO05D005024 1.1e-181 640.6 437 72.8
VMungo1383G2986 Vigna mungo HOM05D003384 ORTHO05D005024 1.1e-181 640.6 437 71.9
ClCG07G004570 Citrullus lanatus HOM05D003384 ORTHO05D005024 1.7e-180 636.7 439 70.2
CDE05G1365 Ceratophyllum demersum HOM05D003384 ORTHO05D005024 6.3e-180 634.8 441 71.2
Medtr6g011360 Medicago truncatula HOM05D003384 ORTHO05D005024 6.3e-180 634.8 436 72.2
Medtr8g100045 Medicago truncatula HOM05D003384 ORTHO05D005024 2.4e-179 632.9 436 72.2
unitig_0.g1015 Utricularia gibba HOM05D003384 ORTHO05D005024 5.3e-179 631.7 473 67.9
Aqoxy1G00556 Aquilegia oxysepala HOM05D003384 ORTHO05D005024 1.6e-178 630.2 438 71.5
Oeu001502.2 Olea europaea HOM05D003384 ORTHO05D005024 4.5e-178 628.6 407 75.9
AUR62042439 Chenopodium quinoa HOM05D003384 ORTHO05D005024 4.2e-176 622.1 469 67.8
Aqoxy5G02953 Aquilegia oxysepala HOM05D003384 ORTHO05D005024 2.3e-174 616.3 470 66.4
ATR0580G036 Amborella trichopoda HOM05D003384 ORTHO05D005024 5.2e-174 615.1 472 68.0
SHI22710 Sapria himalayana HOM05D003384 ORTHO05D005024 5.2e-174 615.1 436 67.9
Actinidia02926 Actinidia chinensis HOM05D003384 ORTHO05D005024 8.8e-174 614.4 449 70.6
HPP92_005602 Vanilla planifolia HOM05D003384 ORTHO05D005024 3.7e-172 609.0 439 69.7
Zm00001eb067720 Zea mays HOM05D003384 ORTHO05D005024 9.1e-171 604.4 472 65.7
Os05g0104650 Oryza sativa ssp. japonica HOM05D003384 ORTHO05D005024 2.7e-170 602.8 473 65.8
SEGI_27631 Sequoiadendron giganteum HOM05D003384 ORTHO05D005024 5.9e-170 601.7 440 68.0
Zm00001eb055170 Zea mays HOM05D003384 ORTHO05D005024 5.5e-168 595.1 439 68.1
Pp3c6_8600 Physcomitrium patens HOM05D003384 ORTHO05D005024 1.7e-161 573.5 439 66.1
AagrBONN_evm.TU.Sc2ySwM_344.2607 Anthoceros agrestis HOM05D003384 ORTHO05D005024 2.9e-161 572.8 439 67.0
CAN.G606.41 Capsicum annuum HOM05D003384 ORTHO05D005024 3.6e-159 565.8 351 78.1
Mapoly0047s0031 Marchantia polymorpha HOM05D003384 ORTHO05D005024 1.0e-158 564.3 439 64.0
SMO358G0063 Selaginella moellendorffii HOM05D003384 ORTHO05D005024 5.7e-157 558.5 444 63.5
Hma1.2p1_0998F.1_g246010 Hydrangea macrophylla HOM05D003384 ORTHO05D005024 3.2e-155 552.7 471 63.7
Nn1g07989 Nelumbo nucifera HOM05D003384 ORTHO05D005024 1.1e-147 527.7 376 73.4
vmacro22732 Vaccinium macrocarpon HOM05D003384 ORTHO05D005024 1.7e-137 493.8 367 70.3
Cre08.g364800 Chlamydomonas reinhardtii HOM05D003384 ORTHO05D005024 2.8e-135 486.5 437 57.9
MCO14G233 Micromonas commoda HOM05D003384 ORTHO05D005024 7.3e-128 461.8 436 54.1
MELO3C018382.2 Cucumis melo HOM05D003384 ORTHO05D005024 8.1e-127 458.4 278 80.2
GSVIVG01016499001 Vitis vinifera HOM05D003384 ORTHO05D005024 8.1e-119 431.8 294 74.5
PRCOL_00000695 Prasinoderma coloniale HOM05D003384 ORTHO05D005024 2.0e-117 427.2 445 50.3
CBR_g19873 Chara braunii HOM05D003384 ORTHO05D005024 1.1e-99 368.2 872 32.0
Oeu031352.2 Olea europaea HOM05D003384 ORTHO05D005024 6.2e-95 352.4 294 61.2
Sopen01g049520 Solanum pennellii HOM05D003384 ORTHO05D005024 2.6e-61 240.7 326 43.3
Cfa023973 Carpinus fangiana HOM05D003384 ORTHO05D005024 1.6e-53 214.9 423 33.6
Haze_26203 Corylus avellana HOM05D003384 ORTHO05D005024 1.5e-51 208.4 331 39.0
Sabra08G0043100 Salix brachista HOM05D001467 ORTHO05D001447 5.2e-41 173.3 380 35.0
Cc04_g11240 Coffea canephora HOM05D003384 ORTHO05D005024 1.6e-26 125.2 74 79.7
PGSC0003DMG400025849 Solanum tuberosum HOM05D003384 ORTHO05D005024 1.2e-24 119.0 74 77.0
CAN.G606.40 Capsicum annuum HOM05D003384 ORTHO05D028515 2.1e-10 71.6 84 47.6
Haze_26202 Corylus avellana HOM05D003384 ORTHO05D005024 2.6e-08 64.7 65 52.3
AagrBONN_evm.TU.Sc2ySwM_228.1807 Anthoceros agrestis HOM05D003384 ORTHO05D023565 2.4e-06 58.2 38 76.3


User provided reference genes

Program Settings