Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 7.5e-188 660.6 395 100.0
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 1.8e-128 463.4 340 83.2
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 2.2e-126 456.4 357 79.0
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 3.4e-124 449.1 338 76.9
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 1.0e-123 447.6 297 77.4
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 1.6e-121 440.3 297 76.8
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 1.6e-121 440.3 297 77.1
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 2.7e-121 439.5 324 79.9
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 4.7e-121 438.7 337 76.3
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 3.0e-120 436.0 296 75.7
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 6.7e-120 434.9 322 77.6
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 1.5e-119 433.7 298 75.8
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 1.5e-119 433.7 315 85.4
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 4.4e-119 432.2 324 76.2
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 9.7e-119 431.0 337 75.7
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 1.7e-118 430.3 331 76.7
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 2.4e-117 426.4 301 73.4
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 5.3e-117 425.2 325 75.7
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 4.5e-116 422.2 300 73.0
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 2.2e-115 419.9 357 68.9
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 2.2e-115 419.9 300 72.7
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 5.0e-115 418.7 350 76.0
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 6.5e-115 418.3 362 73.2
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 1.1e-114 417.5 301 73.8
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 1.9e-114 416.8 406 71.4
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 1.9e-114 416.8 300 72.0
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 3.2e-114 416.0 331 72.2
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 2.1e-113 413.3 301 74.1
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 4.7e-113 412.1 294 75.9
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 4.7e-113 412.1 406 69.5
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 1.0e-112 411.0 300 75.0
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 2.3e-112 409.8 299 73.9
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 5.2e-112 408.7 304 74.0
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 5.7e-111 405.2 302 73.8
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 1.3e-110 404.1 285 75.8
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 2.2e-110 403.3 321 68.8
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 2.8e-110 402.9 285 76.1
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 2.4e-109 399.8 324 79.3
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 2.4e-109 399.8 285 75.4
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 2.2e-107 393.3 335 66.6
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 1.5e-106 390.6 293 66.6
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 3.2e-106 389.4 310 68.1
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 5.5e-106 388.7 300 70.0
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 5.5e-106 388.7 267 73.0
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 5.5e-106 388.7 300 70.7
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 7.2e-106 388.3 297 70.0
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 3.6e-105 386.0 335 70.1
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 3.6e-105 386.0 325 69.2
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 1.0e-104 384.4 299 68.9
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 1.0e-104 384.4 346 63.9
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 1.4e-104 384.0 295 69.2
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 2.3e-104 383.3 259 77.2
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 5.2e-104 382.1 305 66.6
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 6.7e-104 381.7 300 69.7
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 1.5e-103 380.6 322 70.5
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 1.5e-103 380.6 303 68.3
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 2.0e-103 380.2 327 69.7
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 2.6e-103 379.8 320 70.9
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 2.6e-103 379.8 320 70.9
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 3.3e-103 379.4 292 71.6
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 4.4e-103 379.0 331 68.3
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 1.4e-101 374.0 273 78.8
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 3.1e-101 372.9 300 80.3
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 1.6e-100 370.5 272 74.3
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 2.0e-100 370.2 286 71.3
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 2.0e-100 370.2 256 84.4
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 1.1e-98 364.4 235 80.9
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 1.1e-98 364.4 241 78.8
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 1.2e-97 360.9 299 75.9
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 8.0e-97 358.2 266 72.9
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 1.3e-94 350.9 361 60.7
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 1.4e-93 347.4 355 56.6
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 2.7e-92 343.2 342 60.8
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 4.9e-86 322.4 233 75.5
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 6.3e-86 322.0 243 73.7
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 9.2e-85 318.2 204 81.9
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 1.5e-82 310.8 240 69.2
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 5.6e-82 308.9 247 64.4
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 4.9e-78 295.8 210 75.2
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 2.8e-73 280.0 215 83.7
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 7.8e-68 261.9 291 51.2
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 1.6e-65 254.2 196 73.5
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 2.1e-65 253.8 241 60.6
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 4.7e-65 252.7 257 58.4
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 6.2e-65 252.3 163 80.4
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 6.0e-60 235.7 164 77.4
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 1.0e-59 235.0 181 71.3
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 3.9e-51 206.5 136 77.9
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 3.2e-45 186.8 236 49.6
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 5.6e-42 176.0 188 53.2
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 2.1e-41 174.1 239 38.5
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 9.6e-34 148.7 115 79.1
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 5.5e-29 132.9 154 46.8
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 3.9e-27 126.7 74 93.2
QL03p065499 Quercus lobata HOM05D007647 ORTHO05D009644 2.2e-09 67.8 75 49.3
CDE06G1169 Ceratophyllum demersum HOM05D001225 ORTHO05D000346 5.0e-06 56.6 31 71.0


User provided reference genes

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