Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0818 Trochodendron aralioides HOM05D004392 ORTHO05D004846 0.0e+00 1366.3 758 100.0
TAR636G2848 Trochodendron aralioides HOM05D004392 ORTHO05D004846 1.7e-241 839.7 751 67.5
Dinv34257 Davidia involucrata HOM05D004392 ORTHO05D004846 5.7e-176 622.1 758 52.8
GSVIVG01027438001 Vitis vinifera HOM05D004392 ORTHO05D004846 1.0e-172 611.3 742 52.3
MBI12_g11801_MAGBIO Magnolia biondii HOM05D004392 ORTHO05D004846 1.7e-172 610.5 750 55.3
Aqoxy5G04345 Aquilegia oxysepala HOM05D004392 ORTHO05D004846 2.8e-167 593.2 752 55.2
Manes.01G240000 Manihot esculenta HOM05D004392 ORTHO05D004846 1.0e-156 558.1 750 49.5
Atru.chr5.766 Acer truncatum HOM05D004392 ORTHO05D004846 1.2e-149 534.6 759 48.4
Potri.014G105601 Populus trichocarpa HOM05D004392 ORTHO05D004846 1.4e-145 521.2 738 48.4
Sabra14G0077700 Salix brachista HOM05D004392 ORTHO05D004846 4.0e-145 519.6 744 47.2
Cfa003736 Carpinus fangiana HOM05D004392 ORTHO05D004846 6.8e-145 518.8 746 47.5
Thecc.01G333400 Theobroma cacao HOM05D004392 ORTHO05D004846 2.0e-144 517.3 741 47.4
Haze_15733 Corylus avellana HOM05D004392 ORTHO05D004846 4.4e-144 516.2 753 47.9
Gohir.A12G116600 Gossypium hirsutum HOM05D004392 ORTHO05D004846 7.5e-144 515.4 722 47.1
Gohir.D12G120100 Gossypium hirsutum HOM05D004392 ORTHO05D004846 1.1e-142 511.5 722 47.1
Gorai.008G130800 Gossypium raimondii HOM05D004392 ORTHO05D004846 2.4e-142 510.4 722 47.1
PSO063G6286 Papaver somniferum HOM05D004392 ORTHO05D004846 2.7e-141 506.9 782 46.5
Ciclev10018449m.g Citrus clementina HOM05D004392 ORTHO05D004846 8.6e-140 501.9 748 46.0
PSO782G2296 Papaver somniferum HOM05D004392 ORTHO05D004846 8.0e-138 495.4 768 46.5
vmacro00026 Vaccinium macrocarpon HOM05D004392 ORTHO05D004846 6.8e-137 492.3 747 45.9
TWI59G0442 Tripterygium wilfordii HOM05D004392 ORTHO05D004846 1.5e-136 491.1 754 45.8
Prupe.2G197500 Prunus persica HOM05D004392 ORTHO05D004846 4.9e-135 486.1 754 46.9
Hma1.2p1_0074F.1_g038700 Hydrangea macrophylla HOM05D004392 ORTHO05D004846 6.0e-133 479.2 744 46.6
COL.COLO4_23048 Corchorus olitorius HOM05D004392 ORTHO05D004846 2.3e-132 477.2 733 46.1
FAN06G0139 Fragaria x ananassa HOM05D004392 ORTHO05D004846 3.0e-132 476.9 732 47.7
FvH4_7g17640 Fragaria vesca HOM05D004392 ORTHO05D004846 6.6e-132 475.7 732 47.7
FAN03G2506 Fragaria x ananassa HOM05D004392 ORTHO05D004846 6.6e-132 475.7 734 47.1
CiPaw.01G082300 Carya illinoinensis HOM05D004392 ORTHO05D004846 1.9e-131 474.2 761 46.6
MD07G1159400 Malus domestica HOM05D004392 ORTHO05D004846 7.3e-131 472.2 754 46.8
FAN01G0919 Fragaria x ananassa HOM05D004392 ORTHO05D004846 1.2e-130 471.5 738 47.8
QL08p047226 Quercus lobata HOM05D004392 ORTHO05D004846 3.6e-130 469.9 759 44.7
FAN06G0296 Fragaria x ananassa HOM05D004392 ORTHO05D004846 1.4e-129 468.0 732 46.7
Lj9C607G8 Lonicera japonica HOM05D004392 ORTHO05D004846 4.0e-129 466.5 790 45.6
CDE02G2120 Ceratophyllum demersum HOM05D004392 ORTHO05D004846 3.2e-126 456.8 664 46.4
MELO3C005953.2 Cucumis melo HOM05D004392 ORTHO05D004846 4.1e-126 456.4 737 45.6
ClCG05G000190 Citrullus lanatus HOM05D004392 ORTHO05D004846 7.1e-126 455.7 710 46.6
RcHm_v2.0_Chr1g0361071 Rosa chinensis HOM05D004392 ORTHO05D004846 3.9e-124 449.9 748 45.5
Lalb_Chr10g0100861 Lupinus albus HOM05D004392 ORTHO05D004846 5.6e-123 446.0 732 44.1
CsaV3_3G007340 Cucumis sativus L. HOM05D004392 ORTHO05D004846 1.2e-122 444.9 737 44.0
Rhsim07G0000300 Rhododendron simsii HOM05D004392 ORTHO05D004846 4.7e-122 443.0 670 44.6
Phvul.010G119400 Phaseolus vulgaris HOM05D004392 ORTHO05D004846 1.1e-121 441.8 728 42.6
QL10p065016 Quercus lobata HOM05D004392 ORTHO05D004846 1.8e-121 441.0 444 57.4
THA.LOC104801349 Tarenaya hassleriana HOM05D004392 ORTHO05D004846 2.3e-121 440.7 630 47.0
Eucgr.D02650 Eucalyptus grandis HOM05D004392 ORTHO05D004846 7.6e-120 435.6 594 48.0
FAN10G3859 Fragaria x ananassa HOM05D004392 ORTHO05D004846 1.7e-119 434.5 739 44.8
PGR031G1055 Punica granatum HOM05D004392 ORTHO05D004846 1.7e-119 434.5 744 44.1
arahy.Tifrunner.gnm1.ann1.H04KSL Arachis hypogaea HOM05D004392 ORTHO05D004846 4.9e-119 433.0 638 45.8
Ca_26063_v3 Cicer arietinum L. HOM05D004392 ORTHO05D004846 1.1e-118 431.8 584 47.4
Lj3g0000602 Lotus japonicus HOM05D004392 ORTHO05D004846 3.2e-118 430.3 735 40.8
FAN10G1489 Fragaria x ananassa HOM05D004392 ORTHO05D004846 9.2e-118 428.7 737 44.5
arahy.Tifrunner.gnm1.ann1.9PW2R5 Arachis hypogaea HOM05D004392 ORTHO05D004846 1.0e-116 425.2 634 45.1
Glyma.07G049700 Glycine max HOM05D004392 ORTHO05D004846 3.0e-116 423.7 728 41.2
VMungo0331G0990 Vigna mungo HOM05D004392 ORTHO05D004846 8.6e-116 422.2 662 43.4
TPR.G19826 Trifolium pratense HOM05D004392 ORTHO05D004846 4.3e-115 419.9 593 48.1
Glyma.16G018400 Glycine max HOM05D004392 ORTHO05D004846 2.8e-114 417.2 736 40.4
Sc01g0002200 Simmondsia chinensis HOM05D004392 ORTHO05D004846 3.6e-114 416.8 726 43.0
Psat4g164000 Pisum sativum HOM05D004392 ORTHO05D004846 2.0e-112 411.0 584 46.1
Hma1.2p1_0074F.1_g038710 Hydrangea macrophylla HOM05D004392 ORTHO05D004846 4.4e-112 409.8 337 63.5
Hund27149 Selenicereus undatus HOM05D004392 ORTHO05D004846 1.3e-111 408.3 735 43.3
Thhalv10028358m.g Eutrema salsugineum HOM05D004392 ORTHO05D004846 3.8e-111 406.8 744 42.3
Medtr8g024320 Medicago truncatula HOM05D004392 ORTHO05D004846 1.3e-108 398.3 603 45.3
Sp6g01320 Schrenkiella parvula HOM05D004392 ORTHO05D004846 5.1e-108 396.4 745 43.1
Aa31LG5G1150 Aethionema arabicum HOM05D004392 ORTHO05D004846 3.3e-107 393.7 744 41.5
HPP92_014634 Vanilla planifolia HOM05D004392 ORTHO05D004846 9.6e-107 392.1 735 41.4
Carub.0006s3583 Capsella rubella HOM05D004392 ORTHO05D004846 2.1e-106 391.0 753 41.7
SHI29621 Sapria himalayana HOM05D004392 ORTHO05D004846 1.1e-105 388.7 753 42.0
BcaC04g24098 Brassica carinata HOM05D004392 ORTHO05D004846 3.4e-104 383.6 586 44.0
C09p01080 Brassica napus HOM05D004392 ORTHO05D004846 4.5e-104 383.3 588 44.4
Zm00001eb230740 Zea mays HOM05D004392 ORTHO05D004846 4.5e-104 383.3 598 44.3
EL10Ac1g00187 Beta vulgaris HOM05D004392 ORTHO05D004846 1.3e-103 381.7 761 41.3
BolC9t53041H Brassica oleracea HOM05D004392 ORTHO05D004846 2.2e-103 380.9 588 44.0
A09p00990 Brassica napus HOM05D004392 ORTHO05D004846 6.4e-103 379.4 587 44.3
Oeu028215.3 Olea europaea HOM05D004392 ORTHO05D004846 1.9e-102 377.9 683 40.7
BraA09t35770Z Brassica rapa HOM05D004392 ORTHO05D004846 2.4e-102 377.5 581 44.8
AT4G00800 Arabidopsis thaliana HOM05D004392 ORTHO05D004846 5.4e-102 376.3 744 41.1
AL6G52660 Arabidopsis lyrata HOM05D004392 ORTHO05D004846 1.2e-101 375.2 740 40.1
AUR62022676 Chenopodium quinoa HOM05D004392 ORTHO05D004846 1.6e-101 374.8 749 39.9
SEGI_06399 Sequoiadendron giganteum HOM05D004392 ORTHO05D004846 4.6e-101 373.2 793 37.7
Lsat_1_v5_gn_3_140700 Lactuca sativa HOM05D004392 ORTHO05D004846 1.5e-99 368.2 676 42.2
Sed0010760 Sechium edule HOM05D004392 ORTHO05D004846 3.1e-97 360.5 293 63.5
SalBow3G1181 Salvia bowleyana HOM05D004392 ORTHO05D004846 4.5e-96 356.7 587 40.5
SalBow3G3735 Salvia bowleyana HOM05D004392 ORTHO05D004846 4.5e-96 356.7 587 40.5
AUR62004560 Chenopodium quinoa HOM05D004392 ORTHO05D004846 1.3e-95 355.1 737 40.2
BcaB01g02315 Brassica carinata HOM05D004392 ORTHO05D004846 2.2e-95 354.4 723 38.9
Migut.B01921 Erythranthe guttata HOM05D004392 ORTHO05D004846 4.2e-94 350.1 597 40.0
ECA233G3878 Erigeron canadensis HOM05D004392 ORTHO05D004846 3.5e-93 347.1 740 38.6
Sopen05g026910 Solanum pennellii HOM05D004392 ORTHO05D004846 5.6e-91 339.7 641 39.3
Solyc05g044610.3 Solanum lycopersicum HOM05D004392 ORTHO05D004846 9.6e-91 339.0 630 37.5
SGA_v2.0_scaffold98G29423 Striga asiatica HOM05D004392 ORTHO05D004846 8.1e-90 335.9 633 39.5
CAN.G929.34 Capsicum annuum HOM05D004392 ORTHO05D004846 1.4e-89 335.1 641 37.9
MSTRG.17382 Avicennia marina HOM05D004392 ORTHO05D004846 1.8e-89 334.7 755 35.9
Peaxi162Scf00462g00512 Petunia axillaris HOM05D004392 ORTHO05D004846 1.0e-87 328.9 638 40.0
Ah.05g178970 Amaranthus hybridus HOM05D004392 ORTHO05D004846 1.9e-86 324.7 642 38.9
Nitab4.5_0011074g0010 Nicotiana tabacum HOM05D004392 ORTHO05D004846 9.3e-86 322.4 634 37.5
HanXRQChr11g0352941 Helianthus annuus HOM05D004392 ORTHO05D004846 1.6e-82 311.6 585 40.5
HanXRQChr11g0352951 Helianthus annuus HOM05D004392 ORTHO05D004846 1.6e-82 311.6 585 40.5
Cc02_g39950 Coffea canephora HOM05D004392 ORTHO05D004846 2.1e-82 311.2 431 46.6
Nitab4.5_0000006g0150 Nicotiana tabacum HOM05D004392 ORTHO05D004846 1.5e-80 305.1 627 36.7
CSS0009785 Camellia sinensis var. sinensis HOM05D004392 ORTHO05D004846 5.9e-80 303.1 269 59.1
Actinidia08006 Actinidia chinensis HOM05D004392 ORTHO05D004846 3.2e-78 297.4 265 58.9
DCAR_013954 Daucus carota HOM05D004392 ORTHO05D004846 3.0e-76 290.8 585 38.8
Cpa.g.sc193.6 Carica papaya HOM05D004392 ORTHO05D004846 1.5e-72 278.5 569 40.2
Duzib138G1478 Durio zibethinus HOM05D004392 ORTHO05D004846 5.9e-72 276.6 738 35.2
unitig_736.g22806 Utricularia gibba HOM05D004392 ORTHO05D004846 7.9e-69 266.2 608 36.7
Nn3g18803 Nelumbo nucifera HOM05D004392 ORTHO05D004846 2.2e-66 258.1 188 74.5
CAN.G929.32 Capsicum annuum HOM05D004392 ORTHO05D004846 8.2e-66 256.1 591 35.2
SMO114G0120 Selaginella moellendorffii HOM05D004392 ORTHO05D004846 8.5e-63 246.1 669 32.4
ATR0304G014 Amborella trichopoda HOM05D004392 ORTHO05D004846 6.7e-60 236.5 187 66.3
Mapoly0063s0095 Marchantia polymorpha HOM05D004392 ORTHO05D004846 1.5e-59 235.3 662 32.6
ATR0304G056 Amborella trichopoda HOM05D004392 ORTHO05D004846 3.7e-58 230.7 580 37.2
Pp3c17_2710 Physcomitrium patens HOM05D004392 ORTHO05D004846 1.6e-56 225.3 312 40.7
Mapoly0036s0138 Marchantia polymorpha HOM05D004392 ORTHO05D004846 2.7e-53 214.5 722 31.6
AagrBONN_evm.TU.Sc2ySwM_368.256 Anthoceros agrestis HOM05D004392 ORTHO05D004846 6.3e-50 203.4 536 33.4
CAN.G1674.1 Capsicum annuum HOM05D004392 ORTHO05D004846 3.5e-48 197.6 476 35.3
CBR_g34692 Chara braunii HOM05D004392 ORTHO05D004846 1.3e-47 195.7 239 42.3
Psat3g045760 Pisum sativum HOM05D004392 ORTHO05D004846 6.6e-31 140.2 108 63.9
Ca_09729_v3 Cicer arietinum L. HOM05D004392 ORTHO05D004846 1.8e-28 132.1 80 76.2
BcaB01g02314 Brassica carinata HOM05D004392 ORTHO05D004846 2.0e-27 128.6 405 34.3
Pp3c7_20800 Physcomitrium patens HOM05D004392 ORTHO05D004846 2.3e-20 105.1 111 48.6
Psat2g063360 Pisum sativum HOM05D004963 ORTHO05D006638 1.6e-13 82.4 56 66.1
FAN07G2918 Fragaria x ananassa HOM05D004392 ORTHO05D004846 4.7e-13 80.9 128 46.1
FvH4_7g01070 Fragaria vesca HOM05D011336 ORTHO05D017014 5.2e-12 77.4 95 54.7
FAN06G3220 Fragaria x ananassa HOM05D011336 ORTHO05D017014 1.7e-10 72.4 215 39.5


User provided reference genes

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