Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0787 Trochodendron aralioides HOM05D006443 ORTHO05D007797 2.7e-61 238.4 115 100.0
Nn4g22309 Nelumbo nucifera HOM05D006443 ORTHO05D007797 5.5e-22 107.8 76 73.7
GSVIVG01010487001 Vitis vinifera HOM05D006443 ORTHO05D007797 6.1e-21 104.4 72 70.8
Dinv17565 Davidia involucrata HOM05D006443 ORTHO05D007797 1.3e-20 103.2 76 64.5
HanXRQChr08g0207841 Helianthus annuus HOM05D006443 ORTHO05D007797 1.8e-20 102.8 73 65.8
QL03p052624 Quercus lobata HOM05D006443 ORTHO05D007797 1.8e-20 102.8 72 68.1
Gohir.A04G139700 Gossypium hirsutum HOM05D006443 ORTHO05D007797 8.7e-20 100.5 72 63.9
Gorai.012G175900 Gossypium raimondii HOM05D006443 ORTHO05D007797 8.7e-20 100.5 72 63.9
Gohir.D04G182900 Gossypium hirsutum HOM05D006443 ORTHO05D007797 1.1e-19 100.1 67 68.7
Ciclev10031911m.g Citrus clementina HOM05D006443 ORTHO05D007797 2.5e-19 99.0 73 61.6
vmacro19384 Vaccinium macrocarpon HOM05D006443 ORTHO05D007797 2.5e-19 99.0 73 64.4
Actinidia30647 Actinidia chinensis HOM05D006443 ORTHO05D007797 3.3e-19 98.6 72 63.9
Actinidia08069 Actinidia chinensis HOM05D006443 ORTHO05D007797 5.7e-19 97.8 72 62.5
TWI36G0197 Tripterygium wilfordii HOM05D006443 ORTHO05D007797 3.7e-18 95.1 73 58.9
COL.COLO4_20406 Corchorus olitorius HOM05D006443 ORTHO05D007797 8.2e-18 94.0 73 61.6
ClCG11G013630 Citrullus lanatus HOM05D006443 ORTHO05D007797 1.1e-17 93.6 76 60.5
Cc11_g16930 Coffea canephora HOM05D006443 ORTHO05D007797 1.1e-17 93.6 70 64.3
Duzib248G1079 Durio zibethinus HOM05D006443 ORTHO05D007797 1.8e-17 92.8 73 61.6
Atru.chr11.2327 Acer truncatum HOM05D006443 ORTHO05D007797 2.4e-17 92.4 73 60.3
CiPaw.05G109500 Carya illinoinensis HOM05D006443 ORTHO05D007797 4.1e-17 91.7 72 65.3
Hma1.2p1_0065F.1_g035440 Hydrangea macrophylla HOM05D006443 ORTHO05D007797 5.3e-17 91.3 66 68.2
MELO3C011863.2 Cucumis melo HOM05D006443 ORTHO05D007797 6.9e-17 90.9 73 61.6
MD13G1119500 Malus domestica HOM05D006443 ORTHO05D007797 9.0e-17 90.5 71 62.0
Haze_12422 Corylus avellana HOM05D006443 ORTHO05D007797 1.2e-16 90.1 71 64.8
Sed0000233 Sechium edule HOM05D006443 ORTHO05D007797 1.5e-16 89.7 73 61.6
Nitab4.5_0001356g0010 Nicotiana tabacum HOM05D006443 ORTHO05D007797 2.6e-16 89.0 72 56.9
Thecc.02G208000 Theobroma cacao HOM05D006443 ORTHO05D007797 3.4e-16 88.6 73 60.3
FAN07G1264 Fragaria x ananassa HOM05D006443 ORTHO05D007797 5.9e-16 87.8 73 58.9
Cpa.g.sc43.60 Carica papaya HOM05D006443 ORTHO05D007797 7.7e-16 87.4 72 58.3
Manes.13G011800 Manihot esculenta HOM05D006443 ORTHO05D007797 1.0e-15 87.0 76 61.8
CANSAT01G1158 Cannabis sativa HOM05D006443 ORTHO05D007797 1.3e-15 86.7 71 59.2
Nitab4.5_0008905g0010 Nicotiana tabacum HOM05D006443 ORTHO05D007797 1.3e-15 86.7 72 55.6
RcHm_v2.0_Chr4g0430211 Rosa chinensis HOM05D006443 ORTHO05D007797 1.7e-15 86.3 73 57.5
Cfa009372 Carpinus fangiana HOM05D006443 ORTHO05D007797 2.2e-15 85.9 71 59.2
AUR62028926 Chenopodium quinoa HOM05D006443 ORTHO05D007797 3.8e-15 85.1 67 61.2
FAN22G2300 Fragaria x ananassa HOM05D006443 ORTHO05D007797 3.8e-15 85.1 73 57.5
AUR62005622 Chenopodium quinoa HOM05D006443 ORTHO05D007797 6.5e-15 84.3 67 62.7
Oeu058924.1 Olea europaea HOM05D006443 ORTHO05D007797 8.5e-15 84.0 72 52.8
Peaxi162Scf00359g00713 Petunia axillaris HOM05D006443 ORTHO05D007797 8.5e-15 84.0 78 53.8
Potri.003G171900 Populus trichocarpa HOM05D006443 ORTHO05D007797 8.5e-15 84.0 73 57.5
Sc14g0009070 Simmondsia chinensis HOM05D006443 ORTHO05D007797 8.5e-15 84.0 74 56.8
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 1.1e-14 83.6 73 57.5
FvH4_4g23730 Fragaria vesca HOM05D006443 ORTHO05D007797 1.1e-14 83.6 73 56.2
FAN12G3107 Fragaria x ananassa HOM05D006443 ORTHO05D007797 1.1e-14 83.6 73 56.2
FAN17G1989 Fragaria x ananassa HOM05D006443 ORTHO05D007797 1.1e-14 83.6 73 56.2
PGR119G0512 Punica granatum HOM05D006443 ORTHO05D007797 1.4e-14 83.2 75 60.0
THA.LOC104807130 Tarenaya hassleriana HOM05D006443 ORTHO05D007797 1.9e-14 82.8 73 57.5
AT1G11780 Arabidopsis thaliana HOM05D006443 ORTHO05D007797 2.5e-14 82.4 68 57.4
EL10Ac6g13506 Beta vulgaris HOM05D006443 ORTHO05D007797 3.2e-14 82.0 61 62.3
CSS0008831 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 3.2e-14 82.0 74 58.1
CSS0026603 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 3.2e-14 82.0 74 58.1
CAN.G237.4 Capsicum annuum HOM05D006443 ORTHO05D007797 3.2e-14 82.0 65 58.5
Hund06091 Selenicereus undatus HOM05D006443 ORTHO05D007797 3.2e-14 82.0 63 61.9
Sp1g10410 Schrenkiella parvula HOM05D006443 ORTHO05D007797 4.2e-14 81.6 68 57.4
Prupe.1G225500 Prunus persica HOM05D006443 ORTHO05D007797 5.5e-14 81.3 71 56.3
Rhsim12G0100100 Rhododendron simsii HOM05D006443 ORTHO05D007797 5.5e-14 81.3 86 51.2
Glyma.11G250800 Glycine max HOM05D006443 ORTHO05D007797 7.2e-14 80.9 72 55.6
Glyma.18G006200 Glycine max HOM05D006443 ORTHO05D007797 7.2e-14 80.9 72 56.9
Sabra03G0125800 Salix brachista HOM05D006443 ORTHO05D007797 9.4e-14 80.5 73 54.8
SalBow1G6802 Salvia bowleyana HOM05D006443 ORTHO05D007797 1.2e-13 80.1 72 52.8
SalBow2G0214 Salvia bowleyana HOM05D006443 ORTHO05D007797 1.2e-13 80.1 72 52.8
CARHR012120 Cardamine hirsuta HOM05D006443 ORTHO05D007797 1.6e-13 79.7 68 57.4
Psat5g096400 Pisum sativum HOM05D006443 ORTHO05D007797 1.6e-13 79.7 73 54.8
Ca_16457_v3 Cicer arietinum L. HOM05D006443 ORTHO05D007797 2.1e-13 79.3 73 52.1
Phvul.001G262100 Phaseolus vulgaris HOM05D006443 ORTHO05D007797 2.1e-13 79.3 72 52.8
Aqoxy5G03367 Aquilegia oxysepala HOM05D006443 ORTHO05D007797 2.7e-13 79.0 75 64.0
MSTRG.502 Avicennia marina HOM05D006443 ORTHO05D007797 2.7e-13 79.0 72 52.8
AL1G22970 Arabidopsis lyrata HOM05D006443 ORTHO05D007797 3.6e-13 78.6 70 57.1
BcaB08g37422 Brassica carinata HOM05D006443 ORTHO05D007797 3.6e-13 78.6 68 57.4
Carub.0001s1145 Capsella rubella HOM05D006443 ORTHO05D007797 3.6e-13 78.6 68 55.9
Lj6C827T5 Lonicera japonica HOM05D006443 ORTHO05D007797 3.6e-13 78.6 71 62.0
SGA_v2.0_scaffold9G04677 Striga asiatica HOM05D006443 ORTHO05D007797 4.6e-13 78.2 72 52.8
Eucgr.H04637 Eucalyptus grandis HOM05D006443 ORTHO05D007797 6.1e-13 77.8 74 51.4
Sopen04g017520 Solanum pennellii HOM05D006443 ORTHO05D007797 6.1e-13 77.8 65 52.3
Thhalv10008060m.g Eutrema salsugineum HOM05D006443 ORTHO05D007797 7.9e-13 77.4 68 54.4
unitig_747.g21126 Utricularia gibba HOM05D006443 ORTHO05D007797 7.9e-13 77.4 70 54.3
Migut.K00736 Erythranthe guttata HOM05D006443 ORTHO05D007797 1.0e-12 77.0 72 52.8
BraA09t41778Z Brassica rapa HOM05D006443 ORTHO05D007797 1.8e-12 76.3 68 55.9
VMungo1383G0397 Vigna mungo HOM05D006443 ORTHO05D007797 2.3e-12 75.9 72 54.2
Solyc04g045590.3 Solanum lycopersicum HOM05D006443 ORTHO05D007797 3.0e-12 75.5 65 52.3
MBI11_g05329_MAGBIO Magnolia biondii HOM05D006443 ORTHO05D007797 8.8e-12 73.9 72 54.2
Aa31LG1G3790 Aethionema arabicum HOM05D006443 ORTHO05D007797 1.1e-11 73.6 68 52.9
BcaC07g41759 Brassica carinata HOM05D006443 ORTHO05D007797 1.1e-11 73.6 69 56.5
BolC8t52335H Brassica oleracea HOM05D006443 ORTHO05D007797 1.1e-11 73.6 69 56.5
CDE05G3615 Ceratophyllum demersum HOM05D006443 ORTHO05D007797 3.3e-11 72.0 72 51.4
TPR.G17786 Trifolium pratense HOM05D006443 ORTHO05D007797 4.3e-11 71.6 73 49.3
Lsat_1_v5_gn_4_56020 Lactuca sativa HOM05D006443 ORTHO05D007797 9.7e-11 70.5 74 51.4
Lalb_Chr11g0075761 Lupinus albus HOM05D006443 ORTHO05D007797 9.7e-11 70.5 67 47.8
PSO017G6191 Papaver somniferum HOM05D006443 ORTHO05D007797 1.3e-10 70.1 77 54.5
PSO478G2155 Papaver somniferum HOM05D006443 ORTHO05D007797 1.3e-10 70.1 77 54.5
arahy.Tifrunner.gnm1.ann1.DXN1WG Arachis hypogaea HOM05D006443 ORTHO05D007797 1.7e-10 69.7 66 51.5
Medtr3g085290 Medicago truncatula HOM05D006443 ORTHO05D007797 1.7e-10 69.7 74 47.3
arahy.Tifrunner.gnm1.ann1.P16M7J Arachis hypogaea HOM05D006443 ORTHO05D007797 2.2e-10 69.3 66 51.5
DCAR_031205 Daucus carota HOM05D006443 ORTHO05D007797 4.8e-10 68.2 58 53.4
Lj6g0022486 Lotus japonicus HOM05D006443 ORTHO05D007797 3.1e-09 65.5 71 47.9


User provided reference genes

Program Settings