Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0479 Trochodendron aralioides HOM05D003384 ORTHO05D005024 0.0e+00 1275.4 643 100.0
TAR633G2052 Trochodendron aralioides HOM05D003384 ORTHO05D005024 0.0e+00 1183.7 629 95.2
Dinv42277 Davidia involucrata HOM05D003384 ORTHO05D005024 0.0e+00 1086.6 638 85.9
PSO837G0041 Papaver somniferum HOM05D003384 ORTHO05D005024 3.7e-309 1064.3 629 84.9
Thecc.05G055600 Theobroma cacao HOM05D003384 ORTHO05D005024 1.7e-306 1055.4 638 82.8
DCAR_011724 Daucus carota HOM05D003384 ORTHO05D005024 2.9e-306 1054.7 638 83.9
MBI14_g11677_MAGBIO Magnolia biondii HOM05D003384 ORTHO05D005024 3.8e-306 1054.3 626 84.0
Sabra10G0154400 Salix brachista HOM05D003384 ORTHO05D005024 2.5e-305 1051.6 638 82.8
QL08p061129 Quercus lobata HOM05D003384 ORTHO05D005024 3.6e-304 1047.7 629 83.6
Prupe.8G024000 Prunus persica HOM05D003384 ORTHO05D005024 7.9e-304 1046.6 629 83.1
Potri.010G200200 Populus trichocarpa HOM05D003384 ORTHO05D005024 1.4e-303 1045.8 638 82.8
Cfa001433 Carpinus fangiana HOM05D003384 ORTHO05D005024 1.1e-302 1042.7 626 84.0
Haze_17110 Corylus avellana HOM05D003384 ORTHO05D005024 2.0e-302 1042.0 626 84.2
MD04G1022300 Malus domestica HOM05D003384 ORTHO05D005024 2.0e-302 1042.0 629 82.5
CSS0027778 Camellia sinensis var. sinensis HOM05D003384 ORTHO05D005024 2.6e-302 1041.6 638 84.0
CSS0047277 Camellia sinensis var. sinensis HOM05D003384 ORTHO05D005024 3.3e-302 1041.2 638 83.4
MD03G1203100 Malus domestica HOM05D003384 ORTHO05D005024 3.3e-302 1041.2 629 82.5
Manes.10G027300 Manihot esculenta HOM05D003384 ORTHO05D005024 1.7e-301 1038.9 629 83.0
Gorai.009G419700 Gossypium raimondii HOM05D003384 ORTHO05D005024 3.7e-301 1037.7 638 81.7
COL.COLO4_27063 Corchorus olitorius HOM05D003384 ORTHO05D005024 6.3e-301 1036.9 638 81.7
Ciclev10030516m.g Citrus clementina HOM05D003384 ORTHO05D005024 1.4e-300 1035.8 638 82.3
Gohir.D04G115100 Gossypium hirsutum HOM05D003384 ORTHO05D005024 2.4e-300 1035.0 638 81.2
FAN08G1276 Fragaria x ananassa HOM05D003384 ORTHO05D005024 3.1e-300 1034.6 629 82.5
PSO478G4441 Papaver somniferum HOM05D003384 ORTHO05D005024 3.1e-300 1034.6 629 82.7
Duzib093G0913 Durio zibethinus HOM05D003384 ORTHO05D005024 9.1e-300 1033.1 638 81.7
Lj1C941G12 Lonicera japonica HOM05D003384 ORTHO05D005024 1.2e-299 1032.7 638 81.5
FAN13G0754 Fragaria x ananassa HOM05D003384 ORTHO05D005024 1.5e-299 1032.3 629 82.4
PSO782G4051 Papaver somniferum HOM05D003384 ORTHO05D005024 2.6e-299 1031.6 629 82.5
Oeu001502.2 Olea europaea HOM05D003384 ORTHO05D005024 4.5e-299 1030.8 622 83.8
FAN04G2139 Fragaria x ananassa HOM05D003384 ORTHO05D005024 1.0e-298 1029.6 629 82.2
Prupe.1G542100 Prunus persica HOM05D003384 ORTHO05D005024 1.0e-298 1029.6 629 82.4
FAN18G2272 Fragaria x ananassa HOM05D003384 ORTHO05D005024 1.7e-298 1028.9 629 82.0
FvH4_5g19530 Fragaria vesca HOM05D003384 ORTHO05D005024 5.0e-298 1027.3 629 81.9
RcHm_v2.0_Chr7g0204141 Rosa chinensis HOM05D003384 ORTHO05D005024 6.5e-298 1026.9 629 82.2
CiPaw.01G290900 Carya illinoinensis HOM05D003384 ORTHO05D005024 8.5e-298 1026.5 629 82.7
Gohir.A04G076000 Gossypium hirsutum HOM05D003384 ORTHO05D005024 1.1e-297 1026.2 621 82.4
Aqoxy5G02953 Aquilegia oxysepala HOM05D003384 ORTHO05D005024 1.4e-297 1025.8 638 80.6
FAN18G2911 Fragaria x ananassa HOM05D003384 ORTHO05D005024 1.4e-297 1025.8 629 81.9
PGSC0003DMG400010235 Solanum tuberosum HOM05D003384 ORTHO05D005024 1.4e-297 1025.8 629 81.7
Rhsim08G0242600 Rhododendron simsii HOM05D003384 ORTHO05D005024 4.2e-297 1024.2 638 81.8
Medtr6g011360 Medicago truncatula HOM05D003384 ORTHO05D005024 5.5e-297 1023.8 626 81.8
Solyc02g076720.3 Solanum lycopersicum HOM05D003384 ORTHO05D005024 5.5e-297 1023.8 629 81.4
Cc07_g16480 Coffea canephora HOM05D003384 ORTHO05D005024 1.6e-296 1022.3 621 83.3
Lj2g0004466 Lotus japonicus HOM05D003384 ORTHO05D005024 1.6e-296 1022.3 621 82.8
vmacro20478 Vaccinium macrocarpon HOM05D003384 ORTHO05D005024 1.6e-296 1022.3 621 83.4
Sopen02g021650 Solanum pennellii HOM05D003384 ORTHO05D005024 3.6e-296 1021.1 629 81.4
arahy.Tifrunner.gnm1.ann1.Z31J18 Arachis hypogaea HOM05D003384 ORTHO05D005024 4.7e-296 1020.8 626 82.1
Medtr8g100045 Medicago truncatula HOM05D003384 ORTHO05D005024 4.7e-296 1020.8 626 81.5
Peaxi162Scf00685g00122 Petunia axillaris HOM05D003384 ORTHO05D005024 6.1e-296 1020.4 638 80.6
Lalb_Chr15g0084621 Lupinus albus HOM05D003384 ORTHO05D005024 8.0e-296 1020.0 626 81.8
Psat7g023040 Pisum sativum HOM05D003384 ORTHO05D005024 8.0e-296 1020.0 626 81.5
Rhsim10G0184100 Rhododendron simsii HOM05D003384 ORTHO05D005024 8.0e-296 1020.0 638 82.0
TWI18G1054 Tripterygium wilfordii HOM05D003384 ORTHO05D005024 1.4e-295 1019.2 629 81.7
Aqoxy1G00556 Aquilegia oxysepala HOM05D003384 ORTHO05D005024 5.2e-295 1017.3 638 79.9
Lj6g0002532 Lotus japonicus HOM05D003384 ORTHO05D005024 5.2e-295 1017.3 621 82.4
Eucgr.I00206 Eucalyptus grandis HOM05D003384 ORTHO05D005024 6.7e-295 1016.9 629 80.9
Peaxi162Scf00668g00439 Petunia axillaris HOM05D003384 ORTHO05D005024 8.8e-295 1016.5 629 80.8
Lj8C80T4 Lonicera japonica HOM05D003384 ORTHO05D005024 1.1e-294 1016.1 638 80.6
Nitab4.5_0000333g0100 Nicotiana tabacum HOM05D003384 ORTHO05D005024 1.1e-294 1016.1 638 80.6
Gohir.A06G008900 Gossypium hirsutum HOM05D003384 ORTHO05D005024 1.5e-294 1015.8 638 80.3
TPR.G25489 Trifolium pratense HOM05D003384 ORTHO05D005024 1.5e-294 1015.8 626 81.3
Sc09g0005970 Simmondsia chinensis HOM05D003384 ORTHO05D005024 2.0e-294 1015.4 626 80.7
Migut.F00756 Erythranthe guttata HOM05D003384 ORTHO05D005024 2.6e-294 1015.0 622 81.5
Cc04_g11240 Coffea canephora HOM05D003384 ORTHO05D005024 3.3e-294 1014.6 621 82.8
Nitab4.5_0001169g0010 Nicotiana tabacum HOM05D003384 ORTHO05D005024 9.7e-294 1013.1 638 80.1
PGR004G0663 Punica granatum HOM05D003384 ORTHO05D005024 2.8e-293 1011.5 627 80.7
Glyma.18G036300 Glycine max HOM05D003384 ORTHO05D005024 1.8e-292 1008.8 626 81.5
Lalb_Chr18g0053121 Lupinus albus HOM05D003384 ORTHO05D005024 3.1e-292 1008.1 626 80.8
CAN.G370.86 Capsicum annuum HOM05D003384 ORTHO05D005024 4.1e-292 1007.7 621 81.0
Phvul.009G004700 Phaseolus vulgaris HOM05D003384 ORTHO05D005024 4.1e-292 1007.7 626 80.8
Glyma.11G221100 Glycine max HOM05D003384 ORTHO05D005024 2.6e-291 1005.0 626 81.0
SalBow6G5425 Salvia bowleyana HOM05D003384 ORTHO05D005024 1.3e-290 1002.7 622 80.1
Ca_17447_v3 Cicer arietinum L. HOM05D003384 ORTHO05D005024 1.7e-290 1002.3 626 80.7
Ca_30022_v3 Cicer arietinum L. HOM05D003384 ORTHO05D005024 1.7e-290 1002.3 626 80.7
MELO3C018382.2 Cucumis melo HOM05D003384 ORTHO05D005024 5.0e-290 1000.7 629 79.8
CsaV3_5G010490 Cucumis sativus L. HOM05D003384 ORTHO05D005024 5.0e-290 1000.7 629 79.7
VMungo1309G0201 Vigna mungo HOM05D003384 ORTHO05D005024 5.0e-290 1000.7 626 80.4
EL10Ac2g04005 Beta vulgaris HOM05D003384 ORTHO05D005024 4.2e-289 997.7 621 80.2
SalBow6G5500 Salvia bowleyana HOM05D003384 ORTHO05D005024 7.2e-289 996.9 622 80.1
Phvul.001G234500 Phaseolus vulgaris HOM05D003384 ORTHO05D005024 9.4e-289 996.5 626 80.4
SGA_v2.0_scaffold2G01034 Striga asiatica HOM05D003384 ORTHO05D005024 2.1e-288 995.3 629 79.7
ClCG07G004540 Citrullus lanatus HOM05D003384 ORTHO05D005024 4.7e-288 994.2 629 79.3
VMungo1383G2986 Vigna mungo HOM05D003384 ORTHO05D005024 4.7e-288 994.2 626 80.5
Sed0002627 Sechium edule HOM05D003384 ORTHO05D005024 6.1e-288 993.8 629 78.9
Ah.03g145450 Amaranthus hybridus HOM05D003384 ORTHO05D005024 5.2e-287 990.7 626 78.8
Thhalv10018011m.g Eutrema salsugineum HOM05D003384 ORTHO05D005024 8.8e-287 989.9 621 79.1
THA.LOC104816583 Tarenaya hassleriana HOM05D003384 ORTHO05D005024 8.8e-287 989.9 626 78.6
AUR62002272 Chenopodium quinoa HOM05D003384 ORTHO05D005024 2.0e-286 988.8 626 79.9
Sp5g29440 Schrenkiella parvula HOM05D003384 ORTHO05D005024 2.6e-286 988.4 622 79.1
CARHR067520 Cardamine hirsuta HOM05D003384 ORTHO05D005024 4.4e-286 987.6 622 79.4
AL2G34140 Arabidopsis lyrata HOM05D003384 ORTHO05D005024 5.7e-286 987.3 622 79.1
Actinidia02926 Actinidia chinensis HOM05D003384 ORTHO05D005024 9.7e-286 986.5 629 81.4
BraA07t31553Z Brassica rapa HOM05D003384 ORTHO05D005024 1.3e-285 986.1 623 79.3
BraA07t30586Z Brassica rapa HOM05D003384 ORTHO05D005024 2.8e-285 984.9 623 78.8
PGSC0003DMG400025849 Solanum tuberosum HOM05D003384 ORTHO05D005024 2.8e-285 984.9 638 78.4
C06p33470 Brassica napus HOM05D003384 ORTHO05D005024 1.1e-284 983.0 623 78.3
BolC6t38461H Brassica oleracea HOM05D003384 ORTHO05D005024 1.1e-284 983.0 623 78.3
A07p29480 Brassica napus HOM05D003384 ORTHO05D005024 1.4e-284 982.6 623 78.8
BolC6t39873H Brassica oleracea HOM05D003384 ORTHO05D005024 1.4e-284 982.6 623 78.8
AT1G74260 Arabidopsis thaliana HOM05D003384 ORTHO05D005024 1.8e-284 982.2 622 79.1
BcaC08g46858 Brassica carinata HOM05D003384 ORTHO05D005024 1.8e-284 982.2 623 78.7
C06p48450 Brassica napus HOM05D003384 ORTHO05D005024 1.8e-284 982.2 623 78.8
Carub.0002s2105 Capsella rubella HOM05D003384 ORTHO05D005024 1.8e-284 982.2 622 79.3
A07p40090 Brassica napus HOM05D003384 ORTHO05D005024 4.1e-284 981.1 621 79.1
Aa31LG7G13860 Aethionema arabicum HOM05D003384 ORTHO05D005024 9.1e-284 979.9 626 78.0
Hund07041 Selenicereus undatus HOM05D003384 ORTHO05D005024 7.7e-283 976.9 621 78.4
HPP92_005602 Vanilla planifolia HOM05D003384 ORTHO05D005024 4.2e-281 971.1 621 78.1
ATR0580G036 Amborella trichopoda HOM05D003384 ORTHO05D005024 1.0e-279 966.5 631 76.9
Cfa014646 Carpinus fangiana HOM05D003384 ORTHO05D005024 1.0e-279 966.5 589 82.9
Os01g0888500 Oryza sativa ssp. japonica HOM05D003384 ORTHO05D005024 5.7e-278 960.7 626 76.7
BcaC08g45597 Brassica carinata HOM05D003384 ORTHO05D005024 3.7e-277 958.0 621 77.1
Os05g0104650 Oryza sativa ssp. japonica HOM05D003384 ORTHO05D005024 4.8e-277 957.6 626 76.5
ECA246G5320 Erigeron canadensis HOM05D003384 ORTHO05D005024 1.4e-276 956.1 626 77.8
HanXRQChr05g0161141 Helianthus annuus HOM05D003384 ORTHO05D005024 5.4e-276 954.1 641 75.5
Lsat_1_v5_gn_6_96581 Lactuca sativa HOM05D003384 ORTHO05D005024 1.2e-275 953.0 616 76.5
Zm00001eb055170 Zea mays HOM05D003384 ORTHO05D005024 1.3e-274 949.5 626 76.0
HanXRQChr08g0232581 Helianthus annuus HOM05D003384 ORTHO05D005024 2.5e-273 945.3 641 75.2
AUR62034627 Chenopodium quinoa HOM05D003384 ORTHO05D005024 3.3e-273 944.9 626 77.3
Zm00001eb067720 Zea mays HOM05D003384 ORTHO05D005024 5.5e-273 944.1 631 75.3
SEGI_27631 Sequoiadendron giganteum HOM05D003384 ORTHO05D005024 3.6e-272 941.4 621 75.2
TPR.G18022 Trifolium pratense HOM05D003384 ORTHO05D005024 2.6e-270 935.3 626 75.7
SHI22710 Sapria himalayana HOM05D003384 ORTHO05D005024 4.1e-268 927.9 643 71.9
ClCG07G004570 Citrullus lanatus HOM05D003384 ORTHO05D005024 3.4e-262 908.3 621 74.6
unitig_0.g1015 Utricularia gibba HOM05D003384 ORTHO05D005024 2.9e-261 905.2 622 74.3
GSVIVG01016499001 Vitis vinifera HOM05D003384 ORTHO05D005024 7.0e-260 900.6 539 84.6
Pp3c6_8600 Physcomitrium patens HOM05D003384 ORTHO05D005024 3.1e-255 885.2 642 68.8
Hma1.2p1_0998F.1_g246010 Hydrangea macrophylla HOM05D003384 ORTHO05D005024 1.0e-250 870.2 638 72.4
AagrBONN_evm.TU.Sc2ySwM_344.2607 Anthoceros agrestis HOM05D003384 ORTHO05D005024 5.1e-250 867.8 629 70.0
Mapoly0047s0031 Marchantia polymorpha HOM05D003384 ORTHO05D005024 5.1e-250 867.8 631 69.6
CAN.G606.41 Capsicum annuum HOM05D003384 ORTHO05D005024 1.6e-248 862.8 638 70.7
SMO358G0063 Selaginella moellendorffii HOM05D003384 ORTHO05D005024 3.4e-238 828.6 624 67.5
AUR62042439 Chenopodium quinoa HOM05D003384 ORTHO05D005024 1.0e-218 763.8 571 71.6
Sopen01g049520 Solanum pennellii HOM05D003384 ORTHO05D005024 5.1e-218 761.5 638 64.6
CDE05G1365 Ceratophyllum demersum HOM05D003384 ORTHO05D005024 7.6e-214 747.7 626 64.5
Cre08.g364800 Chlamydomonas reinhardtii HOM05D003384 ORTHO05D005024 6.1e-203 711.4 623 58.9
CBR_g19873 Chara braunii HOM05D003384 ORTHO05D005024 4.2e-196 688.7 629 57.6
MCO14G233 Micromonas commoda HOM05D003384 ORTHO05D005024 1.0e-194 684.1 620 57.7
Potri.008G058600 Populus trichocarpa HOM05D003384 ORTHO05D005024 3.6e-187 659.1 406 82.0
Dinv10579 Davidia involucrata HOM05D003384 ORTHO05D005024 8.8e-186 654.4 399 81.5
PRCOL_00000695 Prasinoderma coloniale HOM05D003384 ORTHO05D005024 2.5e-180 636.3 638 53.0
CDE05G0219 Ceratophyllum demersum HOM05D003384 ORTHO05D005024 4.0e-178 629.0 410 75.9
Solyc01g107270.4 Solanum lycopersicum HOM05D003384 ORTHO05D005024 1.7e-160 570.5 443 68.2
AUR62009267 Chenopodium quinoa HOM05D003384 ORTHO05D005024 2.1e-147 526.9 317 85.8
Medtr3g085010 Medicago truncatula HOM05D003384 ORTHO05D005024 4.3e-132 476.1 459 56.9
AUR62009268 Chenopodium quinoa HOM05D003384 ORTHO05D005024 3.7e-128 463.0 308 73.4
SEGI_36858 Sequoiadendron giganteum HOM05D003384 ORTHO05D005024 1.3e-120 438.0 301 69.8
Haze_26202 Corylus avellana HOM05D003384 ORTHO05D005024 4.6e-110 402.9 720 37.9
Dinv10578 Davidia involucrata HOM05D003384 ORTHO05D005024 1.6e-107 394.4 224 90.6
Cfa023973 Carpinus fangiana HOM05D003384 ORTHO05D005024 5.3e-90 336.3 669 35.6
MD07G1195900 Malus domestica HOM05D003384 ORTHO05D005024 1.7e-80 304.7 316 57.0
SalBow1G4952 Salvia bowleyana HOM05D003384 ORTHO05D005024 6.7e-69 266.2 195 67.7
CDE05G1678 Ceratophyllum demersum HOM05D003384 ORTHO05D005024 7.0e-66 256.1 166 79.5
Cpa.g.c38225 Carica papaya HOM05D003384 ORTHO05D005024 1.7e-64 251.5 162 75.9
BcaB05g24847 Brassica carinata HOM05D003384 ORTHO05D005024 2.5e-55 221.1 489 35.6
MD12G1173000 Malus domestica HOM05D003384 ORTHO05D005024 6.3e-43 179.9 105 85.7
PGSC0003DMG400013192 Solanum tuberosum HOM05D003384 ORTHO05D011807 9.8e-36 156.0 93 83.9
A02p13130 Brassica napus HOM05D003384 ORTHO05D023565 4.9e-27 127.1 142 52.8
Nitab4.5_0001788g0190 Nicotiana tabacum HOM05D002660 ORTHO05D011807 1.9e-26 125.2 70 90.0
A07p00760 Brassica napus HOM05D003384 ORTHO05D023565 4.1e-26 124.0 142 52.1
BraA01t03674Z Brassica rapa HOM05D003384 ORTHO05D023565 4.1e-26 124.0 142 52.1
RcHm_v2.0_Chr7g0229191 Rosa chinensis HOM05D003384 ORTHO05D345115 1.6e-22 112.1 92 60.9
SMO199G0120 Selaginella moellendorffii HOM05D003384 ORTHO05D376227 3.2e-18 97.8 145 44.8
Sabra08G0043100 Salix brachista HOM05D001467 ORTHO05D001447 5.4e-18 97.1 75 68.0
Actinidia19536 Actinidia chinensis HOM05D003384 ORTHO05D053833 3.9e-16 90.9 190 37.9
PSO063G2603 Papaver somniferum HOM05D008285 ORTHO05D010431 9.5e-15 86.3 72 61.1
PSO339G5238 Papaver somniferum HOM05D008285 ORTHO05D010431 1.6e-14 85.5 72 59.7
SMO077G0006 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 2.1e-14 85.1 158 40.5
SMO353G0102 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 6.2e-14 83.6 119 47.1
SMO009G0025 Selaginella moellendorffii HOM05D003384 ORTHO05D378488 8.9e-13 79.7 133 43.6
Medtr5g080480 Medicago truncatula HOM05D003384 ORTHO05D264199 5.8e-12 77.0 54 68.5
SMO149G0003 Selaginella moellendorffii HOM05D003384 ORTHO05D375727 9.9e-12 76.3 186 35.5
A09p48460 Brassica napus HOM05D003384 ORTHO05D023565 1.3e-11 75.9 88 48.9
SMO011G0040 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 8.4e-11 73.2 54 70.4
SMO116G0212 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 8.4e-11 73.2 54 70.4
SMO347G0175 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 8.4e-11 73.2 54 70.4
SMO032G0004 Selaginella moellendorffii HOM05D003320 ORTHO05D003941 2.4e-10 71.6 67 61.2
SMO341G0001 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 1.2e-09 69.3 55 67.3
SMO036G0002 Selaginella moellendorffii HOM05D003384 ORTHO05D374652 6.0e-09 67.0 136 38.2
SMO112G0025 Selaginella moellendorffii HOM05D003384 ORTHO05D378420 6.0e-09 67.0 136 38.2
SMO360G0013 Selaginella moellendorffii HOM05D003384 ORTHO05D377588 2.3e-08 65.1 106 43.4
SMO364G0055 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 3.9e-08 64.3 79 45.6
SMO286G0018 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 1.5e-07 62.4 46 69.6
SMO353G0290 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 7.3e-07 60.1 119 40.3
DCAR_007785 Daucus carota HOM05D032355 ORTHO05D004109 3.6e-06 57.8 95 40.0


User provided reference genes

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