Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1462 Trochodendron aralioides HOM05D001617 ORTHO05D002495 1.1e-62 243.0 113 100.0
TAR628G0236 Trochodendron aralioides HOM05D001617 ORTHO05D002495 8.0e-42 173.7 99 83.8
TAR376G0674 Trochodendron aralioides HOM05D001617 ORTHO05D002495 3.8e-36 154.8 98 74.5
TAR381G0572 Trochodendron aralioides HOM05D001617 ORTHO05D002495 6.3e-31 137.5 98 70.4
GSVIVG01013388001 Vitis vinifera HOM05D001617 ORTHO05D002495 5.7e-24 114.4 99 56.6
Aqoxy5G01008 Aquilegia oxysepala HOM05D001617 ORTHO05D002495 7.0e-22 107.5 95 51.6
MBI08_g12256_MAGBIO Magnolia biondii HOM05D001617 ORTHO05D002495 7.0e-22 107.5 95 57.9
CSS0046724 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D002495 2.0e-21 105.9 98 53.1
PSO761G0304 Papaver somniferum HOM05D001617 ORTHO05D002495 2.0e-21 105.9 99 51.5
QL06p052998 Quercus lobata HOM05D001617 ORTHO05D002495 2.0e-21 105.9 96 54.2
PSO210G3657 Papaver somniferum HOM05D001617 ORTHO05D002495 2.7e-21 105.5 99 51.5
PSO675G5809 Papaver somniferum HOM05D001617 ORTHO05D002495 1.7e-20 102.8 99 53.5
Actinidia17357 Actinidia chinensis HOM05D001617 ORTHO05D002495 5.0e-20 101.3 96 50.0
PSO541G1203 Papaver somniferum HOM05D001617 ORTHO05D002495 5.0e-20 101.3 99 51.5
AUR62002048 Chenopodium quinoa HOM05D001617 ORTHO05D002495 1.5e-19 99.8 98 44.9
CSS0007552 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D002495 1.9e-19 99.4 96 50.0
Cc07_g11890 Coffea canephora HOM05D001617 ORTHO05D002495 1.9e-19 99.4 98 46.9
Hma1.2p1_0085F.1_g044640 Hydrangea macrophylla HOM05D001617 ORTHO05D002495 1.9e-19 99.4 98 49.0
AUR62003747 Chenopodium quinoa HOM05D001617 ORTHO05D002495 4.3e-19 98.2 98 43.9
vmacro20630 Vaccinium macrocarpon HOM05D001617 ORTHO05D002495 5.6e-19 97.8 96 44.8
EL10Ac6g15053 Beta vulgaris HOM05D001617 ORTHO05D002495 1.2e-18 96.7 98 44.9
Lj4A237T63 Lonicera japonica HOM05D001617 ORTHO05D002495 1.2e-18 96.7 96 46.9
Actinidia22896 Actinidia chinensis HOM05D001617 ORTHO05D002495 2.1e-18 95.9 96 46.9
CSS0008207 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D002495 2.1e-18 95.9 96 46.9
CSS0014760 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D002495 2.1e-18 95.9 96 46.9
Dinv31960 Davidia involucrata HOM05D001617 ORTHO05D002495 2.8e-18 95.5 95 46.3
CAN.G1238.13 Capsicum annuum HOM05D001617 ORTHO05D002495 1.4e-17 93.2 98 45.9
CiPaw.08G181800 Carya illinoinensis HOM05D001617 ORTHO05D002495 1.4e-17 93.2 94 48.9
Cfa007080 Carpinus fangiana HOM05D001617 ORTHO05D002495 3.1e-17 92.0 96 49.0
Peaxi162Scf01475g00015 Petunia axillaris HOM05D001617 ORTHO05D002495 6.8e-17 90.9 98 44.9
Sc07g0001370 Simmondsia chinensis HOM05D001617 ORTHO05D002495 8.9e-17 90.5 98 43.9
DCAR_014309 Daucus carota HOM05D001617 ORTHO05D002495 1.2e-16 90.1 98 43.9
Nitab4.5_0001467g0020 Nicotiana tabacum HOM05D001617 ORTHO05D002495 1.5e-16 89.7 98 43.9
GSVIVG01026636001 Vitis vinifera HOM05D001617 ORTHO05D002495 1.5e-16 89.7 98 46.9
Nitab4.5_0004608g0050 Nicotiana tabacum HOM05D001617 ORTHO05D002495 3.4e-16 88.6 98 43.9
Ah.03g142810 Amaranthus hybridus HOM05D001617 ORTHO05D002495 4.4e-16 88.2 98 41.8
Dinv40190 Davidia involucrata HOM05D001617 ORTHO05D002495 4.4e-16 88.2 98 45.9
PGSC0003DMG400001565 Solanum tuberosum HOM05D001617 ORTHO05D002495 4.4e-16 88.2 98 42.9
Solyc02g082670.3 Solanum lycopersicum HOM05D001617 ORTHO05D002495 5.8e-16 87.8 98 42.9
Sopen02g027410 Solanum pennellii HOM05D001617 ORTHO05D002495 5.8e-16 87.8 98 42.9
MSTRG.2743 Avicennia marina HOM05D001617 ORTHO05D002495 2.2e-15 85.9 96 42.7
ATR0807G226 Amborella trichopoda HOM05D001617 ORTHO05D002495 2.9e-15 85.5 97 45.4
SalBow3G0443 Salvia bowleyana HOM05D001617 ORTHO05D002495 3.7e-15 85.1 98 42.9
Hund19694 Selenicereus undatus HOM05D001617 ORTHO05D002495 3.7e-15 85.1 105 42.9
ECA246G3648 Erigeron canadensis HOM05D001617 ORTHO05D002495 8.3e-15 84.0 82 41.5
SalBow3G3634 Salvia bowleyana HOM05D001617 ORTHO05D002495 8.3e-15 84.0 83 47.0
CiPaw.07G002500 Carya illinoinensis HOM05D001617 ORTHO05D002495 1.1e-14 83.6 96 44.8
GSVIVG01026638001 Vitis vinifera HOM05D001617 ORTHO05D002495 1.1e-14 83.6 98 44.9
Nn5g30993 Nelumbo nucifera HOM05D001617 ORTHO05D002495 1.4e-14 83.2 96 46.9
Medtr1g115315 Medicago truncatula HOM05D001617 ORTHO05D002495 1.2e-13 80.1 98 41.8
Dinv08161 Davidia involucrata HOM05D001617 ORTHO05D002495 1.6e-13 79.7 70 54.3
Psat6g236200 Pisum sativum HOM05D001617 ORTHO05D002495 2.7e-13 79.0 98 41.8
CSS0012433 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D002495 6.0e-13 77.8 70 54.3
CSS0015703 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D002495 6.0e-13 77.8 70 54.3
Haze_03606 Corylus avellana HOM05D001617 ORTHO05D002495 1.7e-12 76.3 70 51.4
Sed0018688 Sechium edule HOM05D001617 ORTHO05D002495 1.7e-12 76.3 96 40.6
RcHm_v2.0_Chr2g0097121 Rosa chinensis HOM05D001617 ORTHO05D002495 3.9e-12 75.1 84 46.4
FvH4_1g10280 Fragaria vesca HOM05D001617 ORTHO05D002495 5.0e-12 74.7 84 46.4
Rhsim10G0195400 Rhododendron simsii HOM05D001617 ORTHO05D002495 5.0e-12 74.7 70 47.1
HanXRQChr15g0483411 Helianthus annuus HOM05D001617 ORTHO05D002495 6.6e-12 74.3 82 40.2
FAN23G1150 Fragaria x ananassa HOM05D001617 ORTHO05D002495 8.6e-12 73.9 92 43.5
FAN26G0309 Fragaria x ananassa HOM05D001617 ORTHO05D002495 8.6e-12 73.9 87 47.1
Aqoxy6G01614 Aquilegia oxysepala HOM05D001617 ORTHO05D002495 1.1e-11 73.6 99 44.4
MD02G1114900 Malus domestica HOM05D001617 ORTHO05D002495 1.1e-11 73.6 94 43.6
CSS0013702 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D002495 1.5e-11 73.2 70 51.4
CsaV3_3G000330 Cucumis sativus L. HOM05D001617 ORTHO05D002495 1.5e-11 73.2 99 38.4
FAN19G1097 Fragaria x ananassa HOM05D001617 ORTHO05D002495 1.5e-11 73.2 84 45.2
MD15G1230800 Malus domestica HOM05D001617 ORTHO05D002495 1.5e-11 73.2 92 41.3
MELO3C013727.2 Cucumis melo HOM05D001617 ORTHO05D002495 1.9e-11 72.8 99 38.4
ClCG10G000300 Citrullus lanatus HOM05D001617 ORTHO05D002495 2.5e-11 72.4 99 38.4
Eucgr.I02222 Eucalyptus grandis HOM05D001617 ORTHO05D002495 2.5e-11 72.4 104 41.3
Oeu042476.2 Olea europaea HOM05D001617 ORTHO05D002495 2.5e-11 72.4 93 36.6
Prupe.7G183300 Prunus persica HOM05D001617 ORTHO05D002495 2.5e-11 72.4 73 49.3
ECA232G1208 Erigeron canadensis HOM05D001617 ORTHO05D002495 7.3e-11 70.9 89 36.0
Eucgr.J02689 Eucalyptus grandis HOM05D001617 ORTHO05D002495 2.1e-10 69.3 104 40.4
Eucgr.L02617 Eucalyptus grandis HOM05D001617 ORTHO05D002495 2.1e-10 69.3 104 40.4
Os01g0818400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D002495 2.1e-10 69.3 89 41.6
PGR119G0735 Punica granatum HOM05D001617 ORTHO05D002495 1.1e-09 67.0 73 45.2
Hund03601 Selenicereus undatus HOM05D001617 ORTHO05D002495 1.1e-09 67.0 100 38.0
SGA_v2.0_scaffold108G30977 Striga asiatica HOM05D001617 ORTHO05D002495 1.1e-09 67.0 86 37.2
VMungo0720G2440 Vigna mungo HOM05D001617 ORTHO05D002495 6.8e-09 64.3 79 43.0
Ca_11291_v3 Cicer arietinum L. HOM05D001617 ORTHO05D002495 1.2e-08 63.5 97 37.1
Migut.H02206 Erythranthe guttata HOM05D001617 ORTHO05D002495 1.2e-08 63.5 82 40.2
Phvul.007G011600 Phaseolus vulgaris HOM05D001617 ORTHO05D002495 2.6e-08 62.4 96 37.5
FAN28G0538 Fragaria x ananassa HOM05D001617 ORTHO05D002495 7.5e-08 60.8 66 47.0
Lalb_Chr21g0307381 Lupinus albus HOM05D001617 ORTHO05D002495 1.1e-06 57.0 87 41.4
Oeu025039.1 Olea europaea HOM05D001617 ORTHO05D002495 4.1e-06 55.1 87 34.5
SGA_v2.0_scaffold2G00956 Striga asiatica HOM05D001617 ORTHO05D002495 4.1e-06 55.1 82 32.9
HanXRQChr16g0531891 Helianthus annuus HOM05D001617 ORTHO05D002495 5.4e-06 54.7 85 31.8


User provided reference genes

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