Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1171 Trochodendron aralioides HOM05D004078 ORTHO05D004823 3.5e-244 847.8 415 100.0
TAR376G0337 Trochodendron aralioides HOM05D004078 ORTHO05D004823 3.9e-219 764.6 415 90.4
Aqoxy6G01920 Aquilegia oxysepala HOM05D004078 ORTHO05D004823 3.4e-199 698.4 412 81.3
Rhsim06G0011500 Rhododendron simsii HOM05D004078 ORTHO05D004823 2.2e-198 695.7 415 80.5
Nn5g30856 Nelumbo nucifera HOM05D004078 ORTHO05D004823 4.2e-197 691.4 416 81.7
Dinv31900 Davidia involucrata HOM05D004078 ORTHO05D004823 4.3e-194 681.4 415 80.0
Cfa014016 Carpinus fangiana HOM05D004078 ORTHO05D004823 7.4e-194 680.6 415 77.6
Duzib116G0649 Durio zibethinus HOM05D004078 ORTHO05D004823 9.6e-194 680.2 415 78.3
Haze_22719 Corylus avellana HOM05D004078 ORTHO05D004823 5.3e-192 674.5 415 76.9
Thecc.08G052700 Theobroma cacao HOM05D004078 ORTHO05D004823 4.5e-191 671.4 415 78.1
CiPaw.07G143000 Carya illinoinensis HOM05D004078 ORTHO05D004823 5.0e-190 667.9 418 77.0
QL02p013034 Quercus lobata HOM05D004078 ORTHO05D004823 1.9e-189 666.0 412 76.7
Manes.18G008900 Manihot esculenta HOM05D004078 ORTHO05D004823 5.5e-189 664.5 415 76.6
Potri.005G246300 Populus trichocarpa HOM05D004078 ORTHO05D004823 2.1e-188 662.5 414 77.3
COL.COLO4_26076 Corchorus olitorius HOM05D004078 ORTHO05D004823 1.9e-186 656.0 408 76.5
Duzib093G0900 Durio zibethinus HOM05D004078 ORTHO05D004823 1.9e-186 656.0 415 76.1
Sabra05G0190400 Salix brachista HOM05D004078 ORTHO05D004823 1.9e-186 656.0 414 76.1
CSS0030403 Camellia sinensis var. sinensis HOM05D004078 ORTHO05D004823 2.2e-185 652.5 411 76.4
MBI05_g32275_MAGBIO Magnolia biondii HOM05D004078 ORTHO05D004823 1.8e-184 649.4 413 77.7
Atru.chr13.207 Acer truncatum HOM05D004078 ORTHO05D004823 7.2e-181 637.5 417 73.1
MBI09_g17152_MAGBIO Magnolia biondii HOM05D004078 ORTHO05D004823 1.2e-180 636.7 414 75.4
Hma1.2p1_0023F.1_g015860 Hydrangea macrophylla HOM05D004078 ORTHO05D004823 5.3e-176 621.3 415 73.5
CANSAT25G3530 Cannabis sativa HOM05D004078 ORTHO05D004823 8.8e-171 604.0 413 70.2
PSO675G8915 Papaver somniferum HOM05D004078 ORTHO05D004823 2.8e-169 599.0 417 71.0
TWI12G0461 Tripterygium wilfordii HOM05D004078 ORTHO05D004823 3.7e-169 598.6 411 71.3
Hma1.2p1_0028F.1_g017320 Hydrangea macrophylla HOM05D004078 ORTHO05D004823 4.1e-168 595.1 415 70.8
PSO541G4079 Papaver somniferum HOM05D004078 ORTHO05D004823 7.7e-167 590.9 414 70.5
Hma1.2p1_0023F.1_g015830 Hydrangea macrophylla HOM05D004078 ORTHO05D004823 2.2e-166 589.3 415 70.6
Dinv31901 Davidia involucrata HOM05D004078 ORTHO05D004823 5.0e-166 588.2 413 70.0
PGSC0003DMG400009959 Solanum tuberosum HOM05D004078 ORTHO05D004823 5.0e-166 588.2 414 69.1
ATR0661G241 Amborella trichopoda HOM05D004078 ORTHO05D004823 1.9e-165 586.3 415 69.2
TWI56G1016 Tripterygium wilfordii HOM05D004078 ORTHO05D004823 1.9e-165 586.3 414 71.0
Actinidia16270 Actinidia chinensis HOM05D004078 ORTHO05D004823 8.0e-164 580.9 408 68.6
TAR091G0003 Trochodendron aralioides HOM05D004078 ORTHO05D004823 2.3e-163 579.3 348 83.3
Potri.002G015800 Populus trichocarpa HOM05D004078 ORTHO05D004823 6.7e-163 577.8 380 73.4
Solyc04g082030.1 Solanum lycopersicum HOM05D004078 ORTHO05D004823 1.1e-162 577.0 414 67.9
Sopen04g035680 Solanum pennellii HOM05D004078 ORTHO05D004823 1.1e-162 577.0 414 67.9
CAN.G311.82 Capsicum annuum HOM05D004078 ORTHO05D004823 2.0e-162 576.2 406 69.5
Thecc.08G052600 Theobroma cacao HOM05D004078 ORTHO05D004823 1.3e-161 573.5 415 67.2
Peaxi162Scf00174g00105 Petunia axillaris HOM05D004078 ORTHO05D004823 2.8e-161 572.4 394 70.6
MELO3C011335.2 Cucumis melo HOM05D004078 ORTHO05D004823 5.3e-160 568.2 409 67.0
Actinidia17020 Actinidia chinensis HOM05D004078 ORTHO05D004823 7.0e-160 567.8 412 68.4
ClCG08G013990 Citrullus lanatus HOM05D004078 ORTHO05D004823 2.7e-159 565.8 406 67.5
Sed0013676 Sechium edule HOM05D004078 ORTHO05D004823 9.4e-157 557.4 384 69.0
SEGI_37656 Sequoiadendron giganteum HOM05D004078 ORTHO05D004823 8.0e-156 554.3 406 65.8
PSO423G0267 Papaver somniferum HOM05D004078 ORTHO05D004823 1.4e-155 553.5 414 65.9
SEGI_03953 Sequoiadendron giganteum HOM05D004078 ORTHO05D004823 3.0e-155 552.4 402 65.9
Nn5g27926 Nelumbo nucifera HOM05D004078 ORTHO05D004823 7.5e-154 547.7 412 66.5
Lalb_Chr08g0246321 Lupinus albus HOM05D004078 ORTHO05D004823 1.1e-152 543.9 411 64.7
Aqoxy5G01089 Aquilegia oxysepala HOM05D004078 ORTHO05D004823 1.6e-151 540.0 414 66.2
TWI56G0120 Tripterygium wilfordii HOM05D004078 ORTHO05D004823 4.5e-151 538.5 413 65.9
TWI56G0218 Tripterygium wilfordii HOM05D004078 ORTHO05D004823 4.5e-151 538.5 413 65.9
Nn5g27925 Nelumbo nucifera HOM05D004078 ORTHO05D004823 5.0e-150 535.0 414 65.2
VMungo1309G0831 Vigna mungo HOM05D004078 ORTHO05D004823 1.5e-149 533.5 409 63.3
Nitab4.5_0003280g0010 Nicotiana tabacum HOM05D004078 ORTHO05D004823 1.9e-149 533.1 365 70.4
Glyma.04G020200 Glycine max HOM05D004078 ORTHO05D004823 2.5e-149 532.7 417 63.3
Atru.chr13.206 Acer truncatum HOM05D004078 ORTHO05D004823 5.5e-149 531.6 410 63.4
Phvul.009G020500 Phaseolus vulgaris HOM05D004078 ORTHO05D004823 1.2e-148 530.4 409 62.6
Glyma.06G020300 Glycine max HOM05D004078 ORTHO05D004823 8.0e-148 527.7 417 62.8
Lalb_Chr23g0265921 Lupinus albus HOM05D004078 ORTHO05D004823 5.7e-146 521.5 413 62.2
Phvul.009G020400 Phaseolus vulgaris HOM05D004078 ORTHO05D004823 9.8e-146 520.8 409 62.3
Aqoxy2G02303 Aquilegia oxysepala HOM05D004078 ORTHO05D004823 8.3e-145 517.7 376 67.3
Aqoxy2G02302 Aquilegia oxysepala HOM05D004078 ORTHO05D004823 2.7e-143 512.7 371 67.1
Duzib177G0502 Durio zibethinus HOM05D004078 ORTHO05D004823 1.0e-142 510.8 395 63.3
Sed0015343 Sechium edule HOM05D004078 ORTHO05D004823 6.6e-142 508.1 400 61.8
Medtr3g114870 Medicago truncatula HOM05D004078 ORTHO05D004823 2.1e-140 503.1 414 59.2
TPR.G38148 Trifolium pratense HOM05D004078 ORTHO05D004823 1.8e-139 500.0 410 60.5
arahy.Tifrunner.gnm1.ann1.GGEE3T Arachis hypogaea HOM05D004078 ORTHO05D004823 5.2e-139 498.4 388 63.1
TPR.G38230 Trifolium pratense HOM05D004078 ORTHO05D004823 1.2e-138 497.3 410 59.8
Thecc.05G287800 Theobroma cacao HOM05D004078 ORTHO05D004823 7.5e-138 494.6 388 62.6
Duzib177G0280 Durio zibethinus HOM05D004078 ORTHO05D004823 1.3e-137 493.8 395 60.8
Gorai.007G284300 Gossypium raimondii HOM05D004078 ORTHO05D004823 1.3e-137 493.8 416 59.1
Gohir.D11G264300 Gossypium hirsutum HOM05D004078 ORTHO05D004823 2.2e-137 493.0 399 60.9
Lj1g0007451 Lotus japonicus HOM05D004078 ORTHO05D004823 2.4e-136 489.6 410 59.8
Gohir.A11G254600 Gossypium hirsutum HOM05D004078 ORTHO05D004823 1.6e-135 486.9 416 58.9
Zm00001eb319850 Zea mays HOM05D004078 ORTHO05D004823 3.5e-135 485.7 411 60.1
Nitab4.5_0001270g0090 Nicotiana tabacum HOM05D004078 ORTHO05D004823 8.6e-134 481.1 392 63.0
Gorai.007G284400 Gossypium raimondii HOM05D004078 ORTHO05D004823 2.5e-133 479.6 401 59.1
TPR.G27977 Trifolium pratense HOM05D004078 ORTHO05D004823 4.3e-133 478.8 413 56.9
Gohir.A11G254700 Gossypium hirsutum HOM05D004078 ORTHO05D004823 7.3e-133 478.0 396 59.6
CsaV3_2G024480 Cucumis sativus L. HOM05D004078 ORTHO05D004823 4.7e-132 475.3 333 68.2
Psat0s1018g0040 Pisum sativum HOM05D004078 ORTHO05D004823 1.0e-131 474.2 414 58.5
Os09g0543400 Oryza sativa ssp. japonica HOM05D004078 ORTHO05D004823 2.0e-130 469.9 412 58.5
Prupe.8G044900 Prunus persica HOM05D004078 ORTHO05D004823 2.0e-130 469.9 415 58.3
Aqoxy5G01091 Aquilegia oxysepala HOM05D004078 ORTHO05D004823 4.4e-130 468.8 413 58.4
TPR.G30061 Trifolium pratense HOM05D004078 ORTHO05D004823 7.5e-130 468.0 405 57.3
Ca_15452_v3 Cicer arietinum L. HOM05D004078 ORTHO05D004823 2.9e-129 466.1 357 63.3
COL.COLO4_15291 Corchorus olitorius HOM05D004078 ORTHO05D004823 4.1e-128 462.2 389 59.9
Ciclev10020253m.g Citrus clementina HOM05D004078 ORTHO05D004823 2.7e-127 459.5 400 59.8
MD05G1034000 Malus domestica HOM05D004078 ORTHO05D004823 1.0e-126 457.6 414 56.0
Ciclev10031824m.g Citrus clementina HOM05D004078 ORTHO05D004823 1.3e-126 457.2 384 61.5
Zm00001eb331690 Zea mays HOM05D004078 ORTHO05D004823 3.9e-126 455.7 413 56.2
COL.COLO4_15294 Corchorus olitorius HOM05D004078 ORTHO05D004823 5.0e-126 455.3 389 59.1
FvH4_4g24730 Fragaria vesca HOM05D004078 ORTHO05D004823 4.3e-125 452.2 395 60.5
COL.COLO4_15293 Corchorus olitorius HOM05D004078 ORTHO05D004823 7.3e-125 451.4 393 58.3
MSTRG.1142 Avicennia marina HOM05D004078 ORTHO05D004823 2.8e-124 449.5 355 64.5
RcHm_v2.0_Chr4g0431831 Rosa chinensis HOM05D004078 ORTHO05D004823 3.6e-124 449.1 394 60.4
FvH4_4g24750 Fragaria vesca HOM05D004078 ORTHO05D004823 1.8e-123 446.8 422 57.3
FvH4_4g27890 Fragaria vesca HOM05D004078 ORTHO05D004823 6.8e-123 444.9 395 59.5
FAN07G1093 Fragaria x ananassa HOM05D004078 ORTHO05D004823 6.8e-123 444.9 422 57.1
RcHm_v2.0_Chr3g0485831 Rosa chinensis HOM05D004078 ORTHO05D004823 6.8e-123 444.9 394 58.1
FAN12G4190 Fragaria x ananassa HOM05D004078 ORTHO05D004823 1.2e-122 444.1 393 59.0
CSS0037182 Camellia sinensis var. sinensis HOM05D004078 ORTHO05D004823 3.4e-122 442.6 413 56.4
CSS0003326 Camellia sinensis var. sinensis HOM05D004078 ORTHO05D004823 5.8e-122 441.8 413 56.2
Rhsim06G0011400 Rhododendron simsii HOM05D004078 ORTHO05D004823 9.8e-122 441.0 364 63.7
FAN17G0799 Fragaria x ananassa HOM05D004078 ORTHO05D004823 2.9e-121 439.5 395 59.5
FvH4_4g24751 Fragaria vesca HOM05D004078 ORTHO05D004823 4.9e-121 438.7 406 57.9
RcHm_v2.0_Chr3g0485901 Rosa chinensis HOM05D004078 ORTHO05D004823 4.9e-121 438.7 419 55.1
FAN12G0110 Fragaria x ananassa HOM05D004078 ORTHO05D004823 6.4e-121 438.3 406 57.9
RcHm_v2.0_Chr3g0485811 Rosa chinensis HOM05D004078 ORTHO05D004823 6.4e-121 438.3 389 59.1
Manes.13G003000 Manihot esculenta HOM05D004078 ORTHO05D004823 1.4e-120 437.2 418 54.5
CAN.G637.4 Capsicum annuum HOM05D004078 ORTHO05D004823 2.3e-115 419.9 393 54.2
FAN12G2492 Fragaria x ananassa HOM05D004078 ORTHO05D004823 6.8e-115 418.3 405 56.0
Prupe.8G048200 Prunus persica HOM05D004078 ORTHO05D004823 1.2e-114 417.5 356 59.6
Peaxi162Scf00171g10044 Petunia axillaris HOM05D004078 ORTHO05D004823 2.0e-114 416.8 385 55.1
Nitab4.5_0005973g0010 Nicotiana tabacum HOM05D004078 ORTHO05D004823 1.3e-113 414.1 392 54.6
Zm00001eb114090 Zea mays HOM05D004078 ORTHO05D004823 3.8e-113 412.5 418 52.2
Thecc.06G067400 Theobroma cacao HOM05D004078 ORTHO05D004823 4.9e-113 412.1 316 63.6
Solyc03g098300.1 Solanum lycopersicum HOM05D004078 ORTHO05D004823 8.4e-113 411.4 392 52.6
Nitab4.5_0001180g0140 Nicotiana tabacum HOM05D004078 ORTHO05D004823 1.9e-112 410.2 393 54.5
TPR.G27976 Trifolium pratense HOM05D004078 ORTHO05D004823 5.4e-112 408.7 407 52.3
Sopen03g029060 Solanum pennellii HOM05D004078 ORTHO05D004823 1.2e-111 407.5 396 53.3
Sopen03g029040 Solanum pennellii HOM05D004078 ORTHO05D004823 2.7e-111 406.4 392 52.0
Sopen03g029020 Solanum pennellii HOM05D004078 ORTHO05D004823 3.5e-111 406.0 392 52.0
Sopen03g029050 Solanum pennellii HOM05D004078 ORTHO05D004823 3.5e-111 406.0 392 52.0
Solyc03g098310.1 Solanum lycopersicum HOM05D004078 ORTHO05D004823 1.0e-110 404.4 409 52.3
Medtr3g114890 Medicago truncatula HOM05D004078 ORTHO05D004823 1.9e-109 400.2 399 53.4
Sopen03g029030 Solanum pennellii HOM05D004078 ORTHO05D004823 4.3e-109 399.1 377 52.8
TAR627G0362 Trochodendron aralioides HOM05D004078 ORTHO05D004823 4.7e-108 395.6 403 48.6
Gohir.D11G264400 Gossypium hirsutum HOM05D004078 ORTHO05D004823 3.1e-107 392.9 342 57.0
RcHm_v2.0_Chr7g0227121 Rosa chinensis HOM05D004078 ORTHO05D004823 6.9e-107 391.7 406 54.9
MD05G1036600 Malus domestica HOM05D004078 ORTHO05D004823 2.4e-104 383.3 413 50.1
MBI18_g05694_MAGBIO Magnolia biondii HOM05D004078 ORTHO05D004823 1.2e-103 380.9 414 46.4
CSS0015589 Camellia sinensis var. sinensis HOM05D004078 ORTHO05D004823 9.6e-101 371.3 408 50.0
AagrBONN_evm.TU.Sc2ySwM_340.331 Anthoceros agrestis HOM05D004078 ORTHO05D004823 4.0e-99 365.9 370 50.5
Thecc.05G287700 Theobroma cacao HOM05D004078 ORTHO05D004823 9.0e-99 364.8 292 61.0
Peaxi162Scf00479g00072 Petunia axillaris HOM05D004078 ORTHO05D004823 1.3e-97 360.9 388 49.7
SMO171G0020 Selaginella moellendorffii HOM05D004078 ORTHO05D004823 3.8e-97 359.4 388 51.0
TAR627G0085 Trochodendron aralioides HOM05D004078 ORTHO05D004823 3.5e-95 352.8 373 47.5
MCO05G310 Micromonas commoda HOM05D004078 ORTHO05D004823 6.0e-95 352.1 403 46.7
Mapoly0001s0543 Marchantia polymorpha HOM05D004078 ORTHO05D000931 1.3e-94 350.9 387 49.9
CAN.G637.1 Capsicum annuum HOM05D004078 ORTHO05D004823 3.0e-94 349.7 392 47.4
Nn7g37243 Nelumbo nucifera HOM05D004078 ORTHO05D004823 2.2e-89 333.6 279 63.8
PRCOL_00001954 Prasinoderma coloniale HOM05D004078 ORTHO05D004823 1.2e-87 327.8 365 48.5
GSVIVG01015447001 Vitis vinifera HOM05D004078 ORTHO05D004823 8.7e-86 321.6 408 45.3
PGSC0003DMG400031047 Solanum tuberosum HOM05D004078 ORTHO05D004823 6.2e-84 315.5 421 43.5
Cre16.g683371 Chlamydomonas reinhardtii HOM05D004078 ORTHO05D004823 2.7e-79 300.1 400 43.0
CDE02G0789 Ceratophyllum demersum HOM05D004078 ORTHO05D004823 8.7e-78 295.0 289 54.0
Cre03.g159500 Chlamydomonas reinhardtii HOM05D004078 ORTHO05D004823 2.6e-74 283.5 360 45.0
Sopen03g029010 Solanum pennellii HOM05D004078 ORTHO05D004823 1.3e-70 271.2 229 58.5
COL.COLO4_24641 Corchorus olitorius HOM05D004078 ORTHO05D004823 5.7e-69 265.8 295 51.9
Cfa026818 Carpinus fangiana HOM05D004078 ORTHO05D004823 3.7e-68 263.1 369 39.6
Prupe.8G047700 Prunus persica HOM05D004078 ORTHO05D004823 5.3e-67 259.2 288 48.6
CAN.G20.32 Capsicum annuum HOM05D004078 ORTHO05D004823 1.2e-58 231.5 181 60.8
ClCG08G013980 Citrullus lanatus HOM05D004078 ORTHO05D150179 1.2e-58 231.5 360 40.3
Os02g0482400 Oryza sativa ssp. japonica HOM05D004078 ORTHO05D004823 2.1e-55 220.7 231 52.4
PGSC0003DMG400025628 Solanum tuberosum HOM05D004078 ORTHO05D004823 2.3e-54 217.2 243 50.2
Nn7g37247 Nelumbo nucifera HOM05D004078 ORTHO05D004823 4.1e-51 206.5 173 64.2
GSVIVG01015446001 Vitis vinifera HOM05D004078 ORTHO05D004823 1.4e-46 191.4 177 56.5
Hma1.2p1_0023F.1_g015870 Hydrangea macrophylla HOM05D004078 ORTHO05D004823 6.7e-46 189.1 218 46.8
RcHm_v2.0_Chr3g0490321 Rosa chinensis HOM05D004078 ORTHO05D004823 2.4e-43 180.6 189 54.5
RcHm_v2.0_Chr3g0490331 Rosa chinensis HOM05D004078 ORTHO05D004823 2.4e-43 180.6 138 62.3
GSVIVG01008730001 Vitis vinifera HOM05D004078 ORTHO05D004823 4.1e-43 179.9 307 38.1
QL02p013060 Quercus lobata HOM05D004078 ORTHO05D004823 4.2e-40 169.9 127 64.6
PGSC0003DMG400024452 Solanum tuberosum HOM05D004078 ORTHO05D004823 1.2e-39 168.3 302 35.4
Prupe.8G048000 Prunus persica HOM05D004078 ORTHO05D004823 8.0e-39 165.6 135 60.0
RcHm_v2.0_Chr3g0485801 Rosa chinensis HOM05D004078 ORTHO05D004823 5.9e-34 149.4 350 33.7
TPR.G7712 Trifolium pratense HOM05D004078 ORTHO05D004823 1.7e-33 147.9 114 58.8
AagrBONN_evm.TU.Sc2ySwM_340.327 Anthoceros agrestis HOM05D004078 ORTHO05D004823 5.0e-33 146.4 151 51.0
Aqoxy6G01662 Aquilegia oxysepala HOM05D004078 ORTHO05D004823 9.5e-24 115.5 82 68.3
Sabra02G0012600 Salix brachista HOM05D004078 ORTHO05D004823 1.8e-19 101.3 62 72.6
FAN12G3541 Fragaria x ananassa HOM05D004078 ORTHO05D004823 7.8e-10 69.3 255 26.7


User provided reference genes

Program Settings