Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G1045 Trochodendron aralioides HOM05D000667 ORTHO05D004096 7.0e-68 260.4 122 100.0
TAR629G0334 Trochodendron aralioides HOM05D000667 ORTHO05D004096 2.4e-60 235.3 122 91.0
Nn3g20642 Nelumbo nucifera HOM05D000667 ORTHO05D004096 6.4e-53 210.7 122 80.3
TWI73G0887 Tripterygium wilfordii HOM05D000667 ORTHO05D004096 2.1e-48 195.7 122 77.0
CSS0039480 Camellia sinensis var. sinensis HOM05D000667 ORTHO05D004096 3.6e-48 194.9 122 75.4
CSS0050416 Camellia sinensis var. sinensis HOM05D000667 ORTHO05D004096 3.6e-48 194.9 122 75.4
Dinv32241 Davidia involucrata HOM05D000667 ORTHO05D004096 3.6e-48 194.9 119 77.3
Atru.chr10.1214 Acer truncatum HOM05D000667 ORTHO05D004096 8.0e-48 193.7 122 76.2
Thecc.06G149500 Theobroma cacao HOM05D000667 ORTHO05D004096 1.4e-47 193.0 122 77.0
Duzib160G0105 Durio zibethinus HOM05D000667 ORTHO05D004096 3.1e-47 191.8 122 75.4
Lalb_Chr18g0055381 Lupinus albus HOM05D000667 ORTHO05D004096 3.1e-47 191.8 122 76.2
MD10G1261300 Malus domestica HOM05D000667 ORTHO05D004096 3.1e-47 191.8 122 75.4
CiPaw.09G122700 Carya illinoinensis HOM05D000667 ORTHO05D004096 4.0e-47 191.4 120 75.0
Prupe.4G081700 Prunus persica HOM05D000667 ORTHO05D004096 4.0e-47 191.4 122 73.8
Glyma.13G218800 Glycine max HOM05D000667 ORTHO05D004096 5.2e-47 191.0 122 75.4
MD05G1283000 Malus domestica HOM05D000667 ORTHO05D004096 5.2e-47 191.0 122 74.6
CANSAT35G0944 Cannabis sativa HOM05D000667 ORTHO05D004096 6.8e-47 190.7 122 74.6
MELO3C002742.2 Cucumis melo HOM05D000667 ORTHO05D004096 6.8e-47 190.7 122 75.4
Manes.17G071100 Manihot esculenta HOM05D000667 ORTHO05D004096 8.9e-47 190.3 122 74.6
Sed0013854 Sechium edule HOM05D000667 ORTHO05D004096 8.9e-47 190.3 122 74.6
arahy.Tifrunner.gnm1.ann1.BT8YZU Arachis hypogaea HOM05D000667 ORTHO05D004096 1.2e-46 189.9 122 74.6
CSS0002746 Camellia sinensis var. sinensis HOM05D000667 ORTHO05D004096 1.2e-46 189.9 122 74.6
CSS0004812 Camellia sinensis var. sinensis HOM05D000667 ORTHO05D004096 1.2e-46 189.9 122 74.6
Duzib235G0040 Durio zibethinus HOM05D000667 ORTHO05D004096 1.5e-46 189.5 122 74.6
arahy.Tifrunner.gnm1.ann1.MZ7XDG Arachis hypogaea HOM05D000667 ORTHO05D004096 2.6e-46 188.7 122 74.6
CsaV3_1G032360 Cucumis sativus L. HOM05D000667 ORTHO05D004096 5.8e-46 187.6 122 74.6
Psat1g188160 Pisum sativum HOM05D000667 ORTHO05D004096 5.8e-46 187.6 122 72.1
PGR042G2716 Punica granatum HOM05D000667 ORTHO05D004096 7.5e-46 187.2 122 73.8
ClCG03G006780 Citrullus lanatus HOM05D000667 ORTHO05D004096 9.8e-46 186.8 122 73.8
Gohir.D09G077366 Gossypium hirsutum HOM05D000667 ORTHO05D004096 9.8e-46 186.8 121 74.4
Gohir.D09G077500 Gossypium hirsutum HOM05D000667 ORTHO05D004096 9.8e-46 186.8 121 74.4
Gorai.006G092600 Gossypium raimondii HOM05D000667 ORTHO05D004096 9.8e-46 186.8 121 74.4
Manes.15G122200 Manihot esculenta HOM05D000667 ORTHO05D004096 9.8e-46 186.8 122 73.8
Sabra06G0148800 Salix brachista HOM05D000667 ORTHO05D004096 1.3e-45 186.4 122 74.6
VMungo0540G0780 Vigna mungo HOM05D000667 ORTHO05D004096 1.3e-45 186.4 122 74.6
QL05p057661 Quercus lobata HOM05D000667 ORTHO05D004096 2.2e-45 185.7 117 74.4
AUR62014707 Chenopodium quinoa HOM05D000667 ORTHO05D004096 2.9e-45 185.3 123 75.6
COL.COLO4_31061 Corchorus olitorius HOM05D000667 ORTHO05D004096 4.9e-45 184.5 122 72.1
MBI02_g36351_MAGBIO Magnolia biondii HOM05D000667 ORTHO05D004096 4.9e-45 184.5 123 73.2
EL10Ac8g20542 Beta vulgaris HOM05D000667 ORTHO05D004096 1.9e-44 182.6 120 72.5
Rhsim13G0114300 Rhododendron simsii HOM05D000667 ORTHO05D004096 2.4e-44 182.2 122 72.1
Sed0011115 Sechium edule HOM05D000667 ORTHO05D004096 2.4e-44 182.2 122 72.1
Potri.006G193800 Populus trichocarpa HOM05D000667 ORTHO05D004096 3.2e-44 181.8 122 72.1
RcHm_v2.0_Chr5g0014291 Rosa chinensis HOM05D000667 ORTHO05D004096 3.2e-44 181.8 122 72.1
FvH4_3g05461 Fragaria vesca HOM05D000667 ORTHO05D004096 5.4e-44 181.0 122 71.3
Hund21282 Selenicereus undatus HOM05D000667 ORTHO05D004096 9.2e-44 180.3 119 76.5
Sc24g0001650 Simmondsia chinensis HOM05D000667 ORTHO05D004096 9.2e-44 180.3 122 73.8
Gohir.A09G077500 Gossypium hirsutum HOM05D000667 ORTHO05D004096 1.6e-43 179.5 116 73.3
Aqoxy5G03132 Aquilegia oxysepala HOM05D000667 ORTHO05D004096 2.7e-43 178.7 122 65.6
Phvul.006G165500 Phaseolus vulgaris HOM05D000667 ORTHO05D004096 4.6e-43 177.9 122 71.3
Ah.14g088850 Amaranthus hybridus HOM05D000667 ORTHO05D004096 6.0e-43 177.6 118 72.9
AUR62012488 Chenopodium quinoa HOM05D000667 ORTHO05D004096 6.0e-43 177.6 118 74.6
Hma1.2p1_0020F.1_g014030 Hydrangea macrophylla HOM05D000667 ORTHO05D004096 7.8e-43 177.2 122 69.7
Peaxi162Scf00307g00074 Petunia axillaris HOM05D000667 ORTHO05D004096 7.8e-43 177.2 119 72.3
Ciclev10015483m.g Citrus clementina HOM05D000667 ORTHO05D004096 1.7e-42 176.0 122 73.0
TPR.G26252 Trifolium pratense HOM05D000667 ORTHO05D004096 1.7e-42 176.0 117 70.9
Medtr2g019230 Medicago truncatula HOM05D000667 ORTHO05D004096 3.0e-42 175.3 122 68.9
Aqoxy1G01694 Aquilegia oxysepala HOM05D000667 ORTHO05D004096 3.9e-42 174.9 122 61.5
Oeu006650.1 Olea europaea HOM05D000667 ORTHO05D004096 3.9e-42 174.9 122 69.7
HanXRQChr11g0341261 Helianthus annuus HOM05D000667 ORTHO05D004096 8.6e-42 173.7 125 68.8
Lj2P303T17 Lonicera japonica HOM05D000667 ORTHO05D004096 3.3e-41 171.8 122 72.1
Oeu031276.1 Olea europaea HOM05D000667 ORTHO05D004096 3.3e-41 171.8 125 68.8
Oeu034141.1 Olea europaea HOM05D000667 ORTHO05D004096 4.3e-41 171.4 122 65.6
HanXRQChr01g0003361 Helianthus annuus HOM05D000667 ORTHO05D004096 1.6e-40 169.5 122 69.7
MSTRG.16248 Avicennia marina HOM05D000667 ORTHO05D004096 6.2e-40 167.5 119 68.1
ECA234G3936 Erigeron canadensis HOM05D000667 ORTHO05D004096 6.2e-40 167.5 122 65.6
Lj6g0000657 Lotus japonicus HOM05D000667 ORTHO05D004096 8.1e-40 167.2 122 69.7
PSO675G5528 Papaver somniferum HOM05D000667 ORTHO05D004096 1.1e-39 166.8 122 68.0
MSTRG.14777 Avicennia marina HOM05D000667 ORTHO05D004096 1.4e-39 166.4 119 64.7
Gohir.D10G042500 Gossypium hirsutum HOM05D000667 ORTHO05D004096 1.4e-39 166.4 117 66.7
Gohir.A10G041600 Gossypium hirsutum HOM05D000667 ORTHO05D004096 1.8e-39 166.0 117 66.7
Migut.H01358 Erythranthe guttata HOM05D000667 ORTHO05D004096 2.3e-39 165.6 125 65.6
Ca_00536_v3 Cicer arietinum L. HOM05D000667 ORTHO05D004096 4.0e-39 164.9 122 67.2
Gorai.011G045000 Gossypium raimondii HOM05D000667 ORTHO05D004096 5.2e-39 164.5 117 65.8
Actinidia16706 Actinidia chinensis HOM05D000667 ORTHO05D004096 6.8e-39 164.1 115 68.7
Glyma.15G093300 Glycine max HOM05D000667 ORTHO05D004096 1.2e-38 163.3 122 68.0
ATR1098G029 Amborella trichopoda HOM05D000667 ORTHO05D004096 4.4e-38 161.4 135 58.5
HanXRQChr16g0525601 Helianthus annuus HOM05D000667 ORTHO05D004096 7.6e-38 160.6 119 68.9
PSO541G1865 Papaver somniferum HOM05D000667 ORTHO05D004096 1.3e-37 159.8 116 67.2
Sp1g25950 Schrenkiella parvula HOM05D000667 ORTHO05D004096 1.3e-37 159.8 122 60.7
BcaB07g32610 Brassica carinata HOM05D000667 ORTHO05D004096 2.9e-37 158.7 122 60.7
BcaC05g27027 Brassica carinata HOM05D000667 ORTHO05D004096 2.9e-37 158.7 122 60.7
A09p36430 Brassica napus HOM05D000667 ORTHO05D004096 2.9e-37 158.7 122 60.7
C05p28890 Brassica napus HOM05D000667 ORTHO05D004096 2.9e-37 158.7 122 60.7
BolC5t31609H Brassica oleracea HOM05D000667 ORTHO05D004096 2.9e-37 158.7 122 60.7
BraA09t39166Z Brassica rapa HOM05D000667 ORTHO05D004096 2.9e-37 158.7 122 60.7
CARHR029320 Cardamine hirsuta HOM05D000667 ORTHO05D004096 1.4e-36 156.4 120 60.0
Os07g0153400 Oryza sativa ssp. japonica HOM05D000667 ORTHO05D004096 1.4e-36 156.4 122 58.2
Aqoxy1G01690 Aquilegia oxysepala HOM05D000667 ORTHO05D004096 2.4e-36 155.6 132 55.3
CAN.G641.46 Capsicum annuum HOM05D000667 ORTHO05D004096 2.4e-36 155.6 119 67.2
Thhalv10007818m.g Eutrema salsugineum HOM05D000667 ORTHO05D004096 3.2e-36 155.2 122 60.7
Lsat_1_v5_gn_1_116980 Lactuca sativa HOM05D000667 ORTHO05D004096 3.2e-36 155.2 122 61.5
Aa31LG6G5580 Aethionema arabicum HOM05D000667 ORTHO05D004096 7.1e-36 154.1 122 59.8
Nitab4.5_0002744g0050 Nicotiana tabacum HOM05D000667 ORTHO05D004096 9.2e-36 153.7 122 60.7
Nitab4.5_0000501g0040 Nicotiana tabacum HOM05D000667 ORTHO05D004096 1.6e-35 152.9 103 73.8
THA.LOC104820652 Tarenaya hassleriana HOM05D000667 ORTHO05D004096 2.1e-35 152.5 122 65.6
Nitab4.5_0004527g0010 Nicotiana tabacum HOM05D000667 ORTHO05D004096 6.0e-35 151.0 103 71.8
Cc00_g01110 Coffea canephora HOM05D000667 ORTHO05D004096 1.7e-34 149.4 101 72.3
Zm00001eb300170 Zea mays HOM05D000667 ORTHO05D004096 3.9e-34 148.3 124 62.1
Solyc02g021600.1 Solanum lycopersicum HOM05D000667 ORTHO05D004096 6.6e-34 147.5 105 69.5
Sopen02g006160 Solanum pennellii HOM05D000667 ORTHO05D004096 6.6e-34 147.5 105 69.5
PGSC0003DMG400003174 Solanum tuberosum HOM05D000667 ORTHO05D004096 4.3e-33 144.8 103 70.9
DCAR_004822 Daucus carota HOM05D000667 ORTHO05D004096 2.8e-32 142.1 103 65.0
DCAR_017361 Daucus carota HOM05D000667 ORTHO05D004096 2.8e-32 142.1 103 65.0
GSVIVG01021505001 Vitis vinifera HOM05D000667 ORTHO05D004096 1.4e-31 139.8 99 70.7
Carub.0001s2831 Capsella rubella HOM05D000667 ORTHO05D004096 1.8e-31 139.4 122 54.1
AT1G30090 Arabidopsis thaliana HOM05D000667 ORTHO05D004096 3.1e-31 138.7 122 52.5
AL1G43990 Arabidopsis lyrata HOM05D000667 ORTHO05D004096 4.0e-31 138.3 122 52.5
Lsat_1_v5_gn_4_29341 Lactuca sativa HOM05D000667 ORTHO05D004096 8.9e-31 137.1 101 66.3
unitig_8.g4886 Utricularia gibba HOM05D000667 ORTHO05D004096 1.3e-29 133.3 123 57.7
AagrBONN_evm.TU.Sc2ySwM_369.512 Anthoceros agrestis HOM05D000667 ORTHO05D004096 1.1e-28 130.2 127 50.4
SGA_v2.0_scaffold106G30656 Striga asiatica HOM05D000667 ORTHO05D004096 1.7e-26 122.9 102 61.8
MBI14_g22131_MAGBIO Magnolia biondii HOM05D000667 ORTHO05D004096 2.3e-26 122.5 122 52.5
ATR0580G133 Amborella trichopoda HOM05D000667 ORTHO05D004096 9.6e-25 117.1 122 50.0
Sabra18G0014800 Salix brachista HOM05D000667 ORTHO05D004096 1.8e-23 112.8 123 48.8
CiPaw.07G212000 Carya illinoinensis HOM05D000667 ORTHO05D004096 4.0e-23 111.7 123 45.5
Manes.15G098200 Manihot esculenta HOM05D000667 ORTHO05D004096 5.3e-23 111.3 120 46.7
Atru.chr7.2649 Acer truncatum HOM05D000667 ORTHO05D004096 9.0e-23 110.5 123 48.8
CiPaw.07G212200 Carya illinoinensis HOM05D000667 ORTHO05D004096 9.0e-23 110.5 123 45.5
Aqoxy7G03123 Aquilegia oxysepala HOM05D000667 ORTHO05D004096 2.0e-22 109.4 123 46.3
TAR625G0547 Trochodendron aralioides HOM05D000667 ORTHO05D004096 2.6e-22 109.0 123 45.5
PGR044G0476 Punica granatum HOM05D000667 ORTHO05D004096 4.4e-22 108.2 124 47.6
SMO174G0059 Selaginella moellendorffii HOM05D000667 ORTHO05D004096 9.9e-22 107.1 127 42.5
TWI34G0704 Tripterygium wilfordii HOM05D000667 ORTHO05D004096 1.3e-21 106.7 120 44.2
Thecc.09G007600 Theobroma cacao HOM05D000667 ORTHO05D004096 1.7e-21 106.3 123 45.5
Potri.018G007100 Populus trichocarpa HOM05D000667 ORTHO05D004096 2.2e-21 105.9 123 46.3
SEGI_00935 Sequoiadendron giganteum HOM05D000667 ORTHO05D004096 2.2e-21 105.9 106 50.0
Duzib187G0973 Durio zibethinus HOM05D000667 ORTHO05D004096 1.1e-20 103.6 123 43.9
COL.COLO4_19029 Corchorus olitorius HOM05D000667 ORTHO05D004096 1.9e-20 102.8 123 43.1
Cpa.g.sc23.19 Carica papaya HOM05D000667 ORTHO05D004096 3.2e-20 102.1 123 44.7
Ciclev10008681m.g Citrus clementina HOM05D000667 ORTHO05D004096 4.2e-20 101.7 123 40.7
Haze_21754 Corylus avellana HOM05D000667 ORTHO05D004096 5.4e-20 101.3 121 41.3
FvH4_2g36671 Fragaria vesca HOM05D000667 ORTHO05D004096 7.1e-20 100.9 123 43.1
FAN20G2017 Fragaria x ananassa HOM05D000667 ORTHO05D004096 7.1e-20 100.9 123 43.9
GSVIVG01035518001 Vitis vinifera HOM05D000667 ORTHO05D004096 7.1e-20 100.9 114 44.7
FAN27G0657 Fragaria x ananassa HOM05D000667 ORTHO05D004096 1.2e-19 100.1 123 43.9
CANSAT25G0354 Cannabis sativa HOM05D000667 ORTHO05D004096 1.6e-19 99.8 124 44.4
RcHm_v2.0_Chr6g0305031 Rosa chinensis HOM05D000667 ORTHO05D004096 1.6e-19 99.8 123 43.9
Glyma.04G075700 Glycine max HOM05D000667 ORTHO05D004096 2.1e-19 99.4 123 40.7
Carub.0004s0390 Capsella rubella HOM05D000667 ORTHO05D004096 2.7e-19 99.0 123 39.8
FAN15G0719 Fragaria x ananassa HOM05D000667 ORTHO05D004096 2.7e-19 99.0 123 43.9
Gohir.A05G064100 Gossypium hirsutum HOM05D000667 ORTHO05D004096 2.7e-19 99.0 123 44.7
Gorai.009G067500 Gossypium raimondii HOM05D000667 ORTHO05D004096 4.6e-19 98.2 123 43.9
Glyma.06G076900 Glycine max HOM05D000667 ORTHO05D004096 6.0e-19 97.8 120 41.7
VMungo1309G0228 Vigna mungo HOM05D000667 ORTHO05D004096 6.0e-19 97.8 125 40.8
CDE05G0359 Ceratophyllum demersum HOM05D000667 ORTHO05D004096 1.7e-18 96.3 117 41.9
Gohir.D05G066701 Gossypium hirsutum HOM05D000667 ORTHO05D004096 2.3e-18 95.9 123 43.1
TWI75G0786 Tripterygium wilfordii HOM05D000667 ORTHO05D004096 3.9e-18 95.1 123 41.5
Lalb_Chr23g0269131 Lupinus albus HOM05D000667 ORTHO05D004096 5.1e-18 94.7 124 41.1
MD08G1127900 Malus domestica HOM05D000667 ORTHO05D004096 6.6e-18 94.4 123 43.9
Lj1g0003153 Lotus japonicus HOM05D000667 ORTHO05D004096 8.7e-18 94.0 132 41.7
Nn2g12659 Nelumbo nucifera HOM05D000667 ORTHO05D004096 2.1e-16 89.4 118 40.7
Zm00001eb389480 Zea mays HOM05D000667 ORTHO05D004096 3.6e-16 88.6 131 38.2
Os06g0655500 Oryza sativa ssp. japonica HOM05D000667 ORTHO05D004096 6.2e-16 87.8 130 39.2
Zm00001eb389500 Zea mays HOM05D000667 ORTHO05D004096 1.8e-15 86.3 130 36.9
Nn8g40514 Nelumbo nucifera HOM05D000667 ORTHO05D004096 2.4e-15 85.9 81 53.1
Psat0s1809g0080 Pisum sativum HOM05D000667 ORTHO05D004096 3.1e-15 85.5 123 38.2
AL4G15090 Arabidopsis lyrata HOM05D000667 ORTHO05D004096 4.0e-15 85.1 123 35.8
Ca_15665_v3 Cicer arietinum L. HOM05D000667 ORTHO05D004096 6.9e-15 84.3 123 40.7
Nitab4.5_0000869g0010 Nicotiana tabacum HOM05D000667 ORTHO05D004096 9.0e-15 84.0 61 63.9
Sp4g03540 Schrenkiella parvula HOM05D000667 ORTHO05D004096 2.0e-14 82.8 123 35.8
Prupe.1G459700 Prunus persica HOM05D000667 ORTHO05D004096 3.4e-14 82.0 123 39.8
Actinidia27057 Actinidia chinensis HOM05D000667 ORTHO05D004096 4.5e-14 81.6 122 43.4
QL12p025198 Quercus lobata HOM05D000667 ORTHO05D004096 9.9e-14 80.5 118 39.8
Medtr3g108860 Medicago truncatula HOM05D000667 ORTHO05D004096 1.3e-13 80.1 124 38.7
MD15G1107400 Malus domestica HOM05D000667 ORTHO05D004096 1.7e-13 79.7 123 39.0
arahy.Tifrunner.gnm1.ann1.1Y4NGA Arachis hypogaea HOM05D000667 ORTHO05D004096 2.2e-13 79.3 133 33.8
arahy.Tifrunner.gnm1.ann1.AAI9J8 Arachis hypogaea HOM05D000667 ORTHO05D004096 2.9e-13 79.0 133 33.8
Thhalv10000205m.g Eutrema salsugineum HOM05D000667 ORTHO05D004096 2.9e-13 79.0 123 35.8
C08p39180 Brassica napus HOM05D000667 ORTHO05D004096 1.9e-12 76.3 125 35.2
BolC8t51491H Brassica oleracea HOM05D000667 ORTHO05D004096 1.9e-12 76.3 125 35.2
AT2G24540 Arabidopsis thaliana HOM05D000667 ORTHO05D004096 2.4e-12 75.9 123 33.3
CARHR117500 Cardamine hirsuta HOM05D000667 ORTHO05D004096 1.2e-11 73.6 124 33.9
A09p56230 Brassica napus HOM05D000667 ORTHO05D004096 2.1e-11 72.8 127 33.9
BraA09t41017Z Brassica rapa HOM05D000667 ORTHO05D004096 2.1e-11 72.8 127 33.9
TPR.G12382 Trifolium pratense HOM05D000667 ORTHO05D004096 1.1e-07 60.5 121 33.1
Phvul.009G101500 Phaseolus vulgaris HOM05D000667 ORTHO05D004096 1.5e-06 56.6 103 34.0


User provided reference genes

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