Gene: AT2G24540

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G24540
  • Transcript Identifier AT2G24540.1
  • Gene Type Coding gene
  • Location Chr2 : 10426414-10427532 : positive

Gene Family Information

  • ID HOM05D000667
  • #Genes/#Species 855/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G24540.1
  • symbol AFR
  • full_name ATTENUATED FAR-RED RESPONSE
  • uniprot Q8LAW2

Descriptions

  • Description Galactose oxidase/kelch repeat superfamily protein
  • Computational description ATTENUATED FAR-RED RESPONSE (AFR); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G30090.1); Has 5748 Blast hits to 4112 proteins in 230 species: Archae - 6; Bacteria - 427; Metazoa - 4034; Fungi - 29; Plants - 1071; Viruses - 14; Other Eukaryotes - 167 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
Gene Ontologyprotein ubiquitination
GO:0009585
IEA
GOA Databasered, far-red light phototransduction
GO:0009585
IMP
IBA
Gene Ontologyred, far-red light phototransduction1 2
GO:0010017
IEA
GOA Databasered or far-red light signaling pathway
GO:0010017
IMP
Gene Ontologyred or far-red light signaling pathway1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015915 Kelch-type beta propeller
IPR006652 Kelch repeat type 1
IPR036047 F-box-like domain superfamily
IPR001810 F-box domain
Mapman id Description
26.1.1.5 External stimuli response.light.red/far red light.substrate adaptor of phytochrome signalling SCF ubiquitin ligase (AFR)